Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U584567 in the current build, Tomato 200607 #2

Unigene SGN-U330084

Unigene Basic Information

Unigene ID:	SGN-U330084
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	330084
mRNA sequence:	Length: 1197 bp

>SGN-U330084 Tomato 200607 #1 (3 members)
GATTGCAACTTAAACTCATTCTTCCTAGAGCAAAATTTTCCCTTAAGCGCAAACACACAAACATTAAGTTTATAAGTGAGCCAAACATCT
CTCAATTTTTTTATTTTTTTTAAAAATGTCAATTTTGTGGTTCTCCATAATTGGTGTGTTTTGTATACAATTTATTAATTGTGTCCATGG
AAATGAACAAGGATGGATTGAAGCTCATGCAACTTTCTATGGAGGTGGTGATGCTTCCGGAACTATGGGTGGAGCATGTGGTTATGGGAA
TTTGTACAGTGAAGGATATGGTACAAACACAGCAGCATTGAGTACAGCACTGTTCAATAATGGTTTGAGTTGTGGATCTTGCTTTGAGCT
TAAATGTGTGGGTGATTCGAAGTGGTGCCTTCCAGGCTCTATAGTGGTAACTGCTACTAATTTTTGCCCACCAAATTTTGCCCTTCCGAA
TAACGCTGGTGGGTGGTGCAATCCTCCATTGCACCACTTTGACCTGGCTCAGCCTGTTTTTCAAAAAATGGCTCAGTACAGAGCTGGGAT
TGTCCCTGTTGCTTACAGAAGAGTACCTTGCCAGAGAAAAGGCGGAATGAGATTCACAATGAACGGTCACTCCTATTTCAATTTAGTGCT
GGTGACGAACGTGGGAGGTTCAGGAGATGTAAATGCAGTTTCGATTAAAGGTTCTAGAACAGGGTGGATAGCAATGTCACGCAATTGGGG
TCAAAATTGGCAGAGCAATGCATTACTTGATGGTCAAATTCTATCATTTAAAGTAACTACAGGTGATGGCCGCACTGTTTTCTGCAACAA
TGCTATCCCTGCTGGATGGTCATTTGGGAAAACTTACACAGGCGCACAGTTTACTTGATTCCTTCAATTTAGTATTGCACTAAGACTATT
ACTACTAGTTAATTAGTGTGGATGATGGGAAGAGCTTATTTTTTAAAGTGGCTCTAAACCTTCTTTTTTTTTTGTTTGTTTCTTAAAAGT
AAATTTAAGATATGAAGTTACGAGTTTGTGTCCTTGTGGTCATTTTTAGGTAAAGGACATAAATTAGGGGCAGTGGTGGTGGATTTTATT
GTCACCACCCGCCACATTACTTCATTATTATAGGGGATATTAGTTTAGAGGTAAAAGCTACTGTTCTGGTTTGATGTTATTTATTGTGGT
TCGTATGAAATTTAAATTATGACTTGG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
expa10	expansin 10

Genomic locations (0)

None

Library representation (3)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (3)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 2 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101494	Expansin 45 endoglucanase-like Barwin-related endoglucanase Rare lipoprotein A	102
2	118506	Expansin 45 endoglucanase-like Barwin-related endoglucanase Expansin/Lol pI - Cellular Component: extracellular region (GO:0005576) Rare lipoprotein A Pollen allergen/expansin C-terminal	74
5	129017	Expansin - Biological Process: cell wall organization and biogenesis (sensu Magnoliophyta) (GO:0009664) Expansin 45 endoglucanase-like Barwin-related endoglucanase Expansin/Lol pI - Cellular Component: extracellular region (GO:0005576) Rare lipoprotein A Pollen allergen/expansin C-terminal	62

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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