Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U586241 in the current build, Tomato 200607 #2

Unigene SGN-U330173

Unigene Basic Information

Unigene ID:	SGN-U330173
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	330173
mRNA sequence:	Length: 1180 bp

>SGN-U330173 Tomato 200607 #1 (2 members)
GAGAACTTTCCATATTCTCCACCCAAAACGAATTGATTTTCTTCGACAACCAAATTAAAAAAAGTTCCTTTTTTTTTTCTATTGGAATCA
AAAGAGACCAAATCCACAAAAGTGACACTTGTAACATCAGAAACTGAGAATTATATTCCCATTCTCTCTGGTCTTTATTTATTATCATAA
ATAAATTATAGTATATATAAGTTTTGTTCTACTTCTGCAACTTTCTAAACAAATTTGCAATATTGTGCAAGTCAGGCAATCCAAGATGGA
TTTACACAAGGAAGGTGATACAGGCTCCGCAAAGCAAAAAAAGGTCAAGATTGTTTTTGTTATAGGTGGTCCGGGGAGTGGTAAAGGAAC
ACAATGCAAAAGAATAGCACAACAATTTGGATACACTCATCTTAGCGTTGGCGAGATTCTACGTCAAGAAACCAGTTCTGGTTCTGAAAC
TGGCCATATGGTTCAAAAAATTATGAAGGAGGGAAAGCTTGTTCCGTCGGATGTAACAGTGAGGCTTCTTCAACAAGCCATGCAGGGAAT
TGATAATGACAAATTCCTCATCGACGGCTTCCCCCGGGATGAAGAGAATGTTAAAGCATTTGAGGATCTTACAAAAATGGAGCCTGAGTT
TGTCCTTTATTTAGATTGTCCACAAGACGAAATGGAGAAGCGCTTGCTATCAAGAAATGAGGGAAGAGAGGATGATAACATCGAGACAAT
AAGGAAGCGATTGAAAGTTTTCGTGGAGTCAACTCTCCCTACAATTGAATACTATGAATCAAAGGGGAAAATTAGGAAGGTTGATGCTGG
AAAATCTATTGATGAGGTTTTTGAATCCATCAAAGTTATTTTCTCACCAGGAAAAGATAACAAGATGCCACCAAGTAAACACAAGTGCAA
ATGCTTGATACTTTGAATGGATGATTGTCTTCAAAGCTTGGTAATTCACAAATATTTTTACTAATGCGCGAGATTTACCTTATAGATACT
ATCCGTGTGTTTGAACTTGTTGCAATAAGTCATGTCGTGGCTATGAATCCATTATTATTGACGGCTGGAGGCCAATCGTCTTTCTGGGGA
TTTGATTGTGTGGAAAACTATATCGCAAGTGTATATAAGCTAAACTATGTATCGTATGATATCTACATGTTTCTTGTTAATAAAAAAAAA
AAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (2)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (2)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 4 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101693	Adenylate kinase - Molecular Function: ATP binding (GO:0005524) - Biological Process: nucleobase nucleoside nucleotide and nucleic acid metabolism (GO:0006139) - Molecular Function: nucleotide kinase activity (GO:0019201) Adenylate/cytidine kinase N-terminal - Molecular Function: ATP binding (GO:0005524) - Molecular Function: nucleotide kinase activity (GO:0019201)	46
2	120035	Adenylate kinase - Molecular Function: ATP binding (GO:0005524) - Biological Process: nucleobase nucleoside nucleotide and nucleic acid metabolism (GO:0006139) - Molecular Function: nucleotide kinase activity (GO:0019201) Adenylate/cytidine kinase N-terminal - Molecular Function: ATP binding (GO:0005524) - Molecular Function: nucleotide kinase activity (GO:0019201) UMP-CMP kinase - Molecular Function: ATP binding (GO:0005524) - Biological Process: nucleobase nucleoside nucleotide and nucleic acid metabolism (GO:0006139) - Molecular Function: phosphotransferase activity phosphate group as acceptor (GO:0016776) - Molecular Function: nucleotide kinase activity (GO:0019201)	11
5	130323	Adenylate kinase - Molecular Function: ATP binding (GO:0005524) - Biological Process: nucleobase nucleoside nucleotide and nucleic acid metabolism (GO:0006139) - Molecular Function: nucleotide kinase activity (GO:0019201) Adenylate/cytidine kinase N-terminal - Molecular Function: ATP binding (GO:0005524) - Molecular Function: nucleotide kinase activity (GO:0019201) UMP-CMP kinase - Molecular Function: ATP binding (GO:0005524) - Biological Process: nucleobase nucleoside nucleotide and nucleic acid metabolism (GO:0006139) - Molecular Function: phosphotransferase activity phosphate group as acceptor (GO:0016776) - Molecular Function: nucleotide kinase activity (GO:0019201)	11

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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