Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been superseded by SGN-U597971 in the current build, Tomato 200607 #2

Unigene SGN-U346042

Unigene Basic Information

Unigene ID:	SGN-U346042
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	346042
mRNA sequence:	Length: 2901 bp

>SGN-U346042 Tomato 200607 #1 (1 members)
GAGGCCCTCAAGGTACCGAAAGCACTATGGGTCACGTCTGGTTCAAAGCACGTGCAAAGTTTCCACGATCACCCACAGGCCTATCGTGAT
AAGATTCAAGCCTTCTTAGCTCAGTATGATCAATAATTTAAAAAACACCAGTCTATCGCCGATAGACTGGTGTTTTTTATCAAAGAGCTT
AATGAACATGATATAATAATGGAGATTAAATGAGGAAATAATGATGATGTGATATCATCATAAAAGCAACAAATAAGTTTACAAAGGATA
AAATCAGCATGTCAGAAGTGGTTGATCAAGCGCCAATAGCTAAGCAGTGGCGGCGTGTCGTGGTTAAAGTGGGCACGAGTAGTATTGTCG
ATGCGGCCGGTGAAATTAAATATCCTGTTATTAACCGGTTAGCTCAGACCTTAACGCAACTGGAACAAACCGGATATGAGGTGATTTTAG
TTACGTCTGGTGCCATTGGCGTGGCGCTCAAACAAATGCATCAAACAAAACGCCCAACAGAAATTCCAGCCCAGCAGGCCTTAGCCGCGA
TTGGCCAAAGTTATTTGATGGCGATTTATAATCAAAGTTTTGCGTTTTATCAGCAACACGTGGGTCAAGTCCTGTTGACTTATGATGTGT
TTCATAACAAGCAAATGTTACGCCATACCATCGATGCCATTGCGGCCATGTTGCAGCAGCGTGTGATTCCAATTATTAACGAAAATGATG
TGATCGCTGTCGATGAATTGGATCATCAACATTCATTTGGCGATAATGACCGCCTTGCCGCCATGGTAACGCATGAGACGAATGCTGATG
CGCTGATTGTCTTAAGTGATATCGATGCGCTGTATACCGCTAATCCGCACGTTGACCCAACAGCACAACCCATTCCGTTGGTAACTGCGG
TGACGGATAGTCTACGCGCCGGTGCACGGGGATCGTCAACGCTTGGGACAGGTGGGATGGCTACTAAGTTAGTGGCAGCCGATTACTTGT
TGCAACATGGGCGACAAATGGTACTGATTAATGGTGAAAATCCGGCCACAATTTTAGAAGTCTTAGCGGGCGAGCCAGTTGGCACATTGT
TTAAGGGAGAGTAAATGACATGGCATTAAGTGTACAAGAAATGGGGCAACGGGCCAAAAAGGCCACAGCACAAGTTGCGGGGTTGTCTTT
GGCGACCCGAAACACCTTACTTAAAAATATGGGTGCCGCCTTGTTGATGCGCCAAGACGAAATTATCGCAGCTAACCAACAAGATTTGGT
CGCGTATGGGGCGAGTTTGAGTCGGCCAATGCAAAAGCGACTAACACTGGATTCAGATGCCTTAACGGCGATTGCTGAATCGTTGGCTGC
TGTCGCGACCTTGCCAGATCCGCTCGCTGGTCCTTATGACACATGGGAAAATCATGCGGGTTTGAAGATTGTGAAAAAAATTGTGCCGTT
GGGCGTGGTGGCGATGATTTATGAAGCACGGCCCAATGTCACCGTGGATGCAGCTGCCTTAGCTTTGAAGTCGGGCAATGCCGTCATTTT
GCGTGGTGGTAAAGAAGCGATTCACAGTAACACAGTGCTCGCCACGATTTTACGGGATGTGCTGATTGATCAGAACTTAAACCCAGATAT
TATCCAACTTATCACAGATACGACCCACGAATCAGTTAACACGCTACTACATATGCGTGAGGCCATTGACGTTTTGATTCCACGGGGCTC
AGCCGCCTTCATTGATTATGTGGTGGCCAATGCGACCGTCCCTGTGATTGAAACCGGTGCGGGGAACACGCATATTTTTGTGGATGCCTC
TGCTGATCAAGCCGCTGCTTTACGGATTATTCATAATGCGAAAACGCAAAAACCAGCCGTTTGTAACGCGGCTGAAAAACTATTAATCCA
TGAAGCGATTGCTCAAGAATTTTTACCAAAAATTGCGGATCGATTAATTGCCGCACGGGTGGCGTTGCGCGGTGATCAAGCCAGTTTGGG
GATTGATGGCCGCCTTACCCCAGCCAGTGACGCTGACTGGGATACGGAATATAATGATTTGGTGATGGGCATTAAGATTGTGCCGGACGT
CACGGCGGCGATTGATTGGATAAACACGCATACGACGCATCATTCAGAGACCATCATTAGCCAAGACCCTGATAACATTGCGGCGTTTAT
GAACCAAGTCGATGCGGCAGTGGTTTATCAAAACGCTTCTAGTCGCTTCACTGATGGGTTTGAATTTGGTTTTGGGGCAGAGATTGGGAT
TTCAACGCAGAAGTTGCATGCGCGGGGACCAATGGGGTTGCCAGCCTTGACGACAATCAAATACGAAGCTTTGGCGATGGCAATTCGGGC
ATAAAAAAGTGTGCAGGATGACTGCAACACTTTTTTTGTTTAAGCTAATACCTTGAGCATGAGTTGTTGGAAATCAGTGACAAAACCGAT
CGGTATCCACCAGAATGGCGGCTTTAGTTGTGGTTGGTTCTAAGAGTTTCTCTTTATCACCAATTGTACGACCATAATCACCGCTTTCAC
GATCATACGTCACGTGCATGGCTAAAGGCATCGTTGTCACATAAGATGGGTCAATCCCAACAGCGACTGCCAATGGGTCGTGTAAGCAGC
GCCTTTCTTGTCGATGTCAAGATTGTAATAGGCATCAATATAGAAATCCATTAAATCAGCATATTTTGTGCAGCGACCGTGCCCAAAGCG
CGCAAGCGGCTGTTTCTTTTTTGGTGAGTAACGTCCGCAATGTCACATCAAGGCCGACCATCGTCAAATTCTTTTGGTGCGTGAAGGCAT
AATCAGCGTCTTCTGGGTCTTGATGAATGTTGGCTTCGGTAAATGGTGTCACATTGCCGGCACGGTCAAGGCACCACCCATTAAGGTCGT
GTTGCCAATGAGTTGGGCCAC

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
pro1	LEU27454 gamma-glutamyl kinase and gamma-glutamyl phosphate reductase

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	vSlycmRNA		8362	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E744599
[Show Image]

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 2 | go: 7 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	102936	Glutamate 5-kinase - Molecular Function: glutamate 5-kinase activity (GO:0004349) - Biological Process: proline biosynthesis (GO:0006561) Aspartate/glutamate/uridylate kinase - Biological Process: amino acid biosynthesis (GO:0008652) delta l-pyrroline-5-carboxylate synthetase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: proline biosynthesis (GO:0006561) Gamma-glutamyl phosphate reductase GPR - Molecular Function: glutamate-5-semialdehyde dehydrogenase activity (GO:0004350) - Biological Process: proline biosynthesis (GO:0006561) Glutamate 5-kinase ProB-related - Molecular Function: glutamate 5-kinase activity (GO:0004349) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: proline biosynthesis (GO:0006561)	9
2	120406	Glutamate 5-kinase - Molecular Function: glutamate 5-kinase activity (GO:0004349) - Biological Process: proline biosynthesis (GO:0006561) Gamma-glutamyl phosphate reductase GPR - Molecular Function: glutamate-5-semialdehyde dehydrogenase activity (GO:0004350) - Biological Process: proline biosynthesis (GO:0006561) Glutamate 5-kinase ProB-related - Molecular Function: glutamate 5-kinase activity (GO:0004349) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: proline biosynthesis (GO:0006561) delta l-pyrroline-5-carboxylate synthetase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: proline biosynthesis (GO:0006561) Aspartate/glutamate/uridylate kinase - Biological Process: amino acid biosynthesis (GO:0008652)	9
5	130693	Glutamate 5-kinase - Molecular Function: glutamate 5-kinase activity (GO:0004349) - Biological Process: proline biosynthesis (GO:0006561) Gamma-glutamyl phosphate reductase GPR - Molecular Function: glutamate-5-semialdehyde dehydrogenase activity (GO:0004350) - Biological Process: proline biosynthesis (GO:0006561) Glutamate 5-kinase ProB-related - Molecular Function: glutamate 5-kinase activity (GO:0004349) - Cellular Component: cytoplasm (GO:0005737) - Biological Process: proline biosynthesis (GO:0006561) delta l-pyrroline-5-carboxylate synthetase - Molecular Function: catalytic activity (GO:0003824) - Biological Process: proline biosynthesis (GO:0006561) Aspartate/glutamate/uridylate kinase - Biological Process: amino acid biosynthesis (GO:0008652)	9

*i value: controls inflation, a process to dissipate family clusters. At high i value, genes tend to be separated into different families.
**Annotation: the most common InterPro annotation(s) of the Arabidopsis members in the family.

Preceding Unigenes (0)

None

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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