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This unigene is from an out-of-date build, Coffea canephora #2
It has been superseded by SGN-U617131 in the current build, Coffea canephora #3

Unigene SGN-U356447

Unigene Basic Information

Unigene ID:	SGN-U356447
Unigene Build:	Coffea canephora #2
Date:	2007-05-18
Organism:	C.canephora
Alternative ID:	356447
mRNA sequence:	Length: 55 bp

>SGN-U356447 Coffea canephora #2 (1 members)
CTATTTGCTCCTTGCTGACTGATCCAAATCCAGATGATCCTCTCGTACCTGAGAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccwc22w	Whole Cherry 22 week after pollination	11656	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E683701
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|115443863\|ref\|NP_001045711.1\|	68.9	8e-11	70.45	132 bp (240.0%)	1
Description:	Os02g0120600 [Oryza sativa (japonica cultivar-group)]
arabidopsis	blastx	At1G64230.1	66.2	4e-12	70.45	132 bp (240.0%)	1
Description:	Symbols: UBC28 \| UBC28; ubiquitin-protein ligase \| chr1:23837455-23838883 FORWARD
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on longest six frame method

>SGN-P169186 (88 Aa)

TRSSQDNTSNALENKQTESPQGLGMVFLVLSIDFWHIMRHPQYAVNPRYISGFSTEQGSHISLYQYGTCDRSQVREDHLDLDQSARSK

SignalP predicts non-secretion with a score of 0.142

No InterPro domain matches or not analyzed.

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P284809 (37 Aa)

SICSLLTDPNPDDPLVPEIDHMCHTDKVKCETPARCX

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U310684	Coffea canephora #1

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