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This unigene is from an out-of-date build, Coffea canephora #2
It has been superseded by SGN-U614059 in the current build, Coffea canephora #3

Unigene SGN-U358485

Unigene Basic Information

Unigene ID:	SGN-U358485
Unigene Build:	Coffea canephora #2
Date:	2007-05-18
Organism:	C.canephora
Alternative ID:	358485
mRNA sequence:	Length: 216 bp

>SGN-U358485 Coffea canephora #2 (1 members)
ATTGGGGGTCTTCCAAGAACGCCTCCCACTATGATGTCGGCACACGGCTTATCGTATACAGCCTGCCATCAAGAATCACCCTGATAAGGG
AGGAGATCCTTAAAAATTTAAAGAGCTAGCTCAAGCCTACGAGGTACTTAGTGACCCAGAGAAGCGTGAGATCTATGATCAGTATGGTGA
GGATGCATTGAAGGAAGGAATGGGTGGTGGAGGTGG

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccs46w	Endosperm and perisperm 46 week after pollination	10903	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E675081
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 1 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	No significant hits ( or none blast was used over this dataset )

arabidopsis	blastx	At3G44110.2	105	8e-24	91.07	168 bp (77.8%)	2
Description:	Symbols: ATJ, ATJ3 \| ATJ3 (Arabidopsis thaliana DnaJ homologue 3) \| chr3:15880166-15882046 REVERSE
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (3)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P286313 (73 Aa)

XLGVFQERLPLXCRHTAYRIQPAIKNHPDKGGDPXKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGG

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P171319 (38 Aa)

KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGG

SignalP predicts non-secretion with a score of 0.021

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P171320 (38 Aa)

WGSSKNASHYDVGTRLIVYSLPSRITLIREEILKNLKS

SignalP predicts non-secretion with a score of 0.096

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U305200	Coffea canephora #1

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