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This unigene is from an out-of-date build, Coffea canephora #2
It has been superseded by SGN-U628367 in the current build, Coffea canephora #3

Unigene SGN-U362227

Unigene Basic Information

Unigene ID:	SGN-U362227
Unigene Build:	Coffea canephora #2
Date:	2007-05-18
Organism:	C.canephora
Alternative ID:	362227
mRNA sequence:	Length: 185 bp

>SGN-U362227 Coffea canephora #2 (1 members)
GCCCACTTGACCGAGACGCTATTGGTCCTGGGGCCAAGAAAATCCCATATATATGCAATGAGATTCAACAGCAGACTATGTCTATGATCT
ATCTCGGGATTCCCGACGAAAATGTACTAGAGAAGCGCATAGAGGGCATGCAGTGCTACTGGGGCTCTAATGCAAAAGATAACAGGCTTG
CTTCT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (1)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Coffea canephora	cccp	Pericarp All development stages combined	10473	1

mRNA member sequences (1)

Alignment image suppressed for unigene with only one aligned EST SGN-E637775
[Show Image]

Markers Information (0)

Unigene Mapped Marker Information

No member sequence or clone is mapped.

COSII Markers Information

None cosii markers associated to this unigene.

Expression Data (0)

No expression data was found associated to this unigene

Annotations (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|22330342\|ref\|NP_176256.2\|	103	2e-21	83.61	183 bp (98.9%)	2
Description:	SWIM zinc finger family protein [Arabidopsis thaliana] >gi19715655\|gb\|AAL91647.1\| At1g60560/F8A…
arabidopsis	blastx	At1G60560.2	103	2e-23	83.61	183 bp (98.9%)	2
Description:	SWIM zinc finger family protein \| chr1:22312986-22314942 REVERSE
swissprot	blastx	No significant hits ( or none blast was used over this dataset )

GO Terms Annotations

No Gene Ontology annotation

Protein prediction analysis (2)

Prediction based on ESTScan [ Show ESTScan Detail]

>SGN-P288709 (62 Aa)

XPLDRDAIGPGAKKIPYICNEIQQQTMSMIYLGIPDENVLEKRIEGMQCYWGSNAKDNRLAS

SignalP analysis not run for this sequence.

No InterPro domain matches or not analyzed.

Prediction based on longest six frame method

>SGN-P175181 (61 Aa)

PLDRDAIGPGAKKIPYICNEIQQQTMSMIYLGIPDENVLEKRIEGMQCYWGSNAKDNRLAS

SignalP predicts non-secretion with a score of 0.027

No InterPro domain matches or not analyzed.

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U311996	Coffea canephora #1

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