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Solanum lycopersicum mRNA Solyc00g050430.2.1

mRNA details  
Name
Solyc00g050430.2.1
Type
mRNA
Length
1,385
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-*- A9YWR2_MEDTR); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch00:13663836..13666165
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2330
Nb exon
4
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc00g050430.2.1 BHLH transcription factor (AHRD V1 *-*- A9YWR2_MEDTR); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

CCACTTTATTCATTTTATCAAGGTCCCTCCCTTTTACATTAATACCCTCCAAGCTCCTCTCTTCTTTTTCTTCCAACAAAACTCCATAGGAAAAAAAAATGGAGTATTACAATGAGAATGGGTTCTTAGAAGAATTATTATCTCTAAGAAGTGAGTCATGGGATACTACAAATGTAGTCCCTATGGAAATGTCTCATGATTTTTACAGTAATGTCCTCAACTATGATAATATTCCACTTCCTTGTACTACTACTTCTAATTCCTTTGAAGGGTATTCATGTAATTTGCCATTTGACCAACAAAATTTGATAAATTGTGGTACTTCATTTTGTAGTCCATTTTGTGATGAATTGTCACCACCATCTTCATTTCCTTCTCAAGATGATTTTTCATCAATTTTGGATGATGAAGTTGGGAACTATAGTTTTCAAAATTTGGAAATGGGGAATAATAGTTGTAATAATGATAATAATAGTAATATTGTTATTCCTTGTAAATTGGAGGAAAATCAAGTGTGTGAAGGTGCAGGAGGAAGAGTTGGTGGAGCTTCAAGTTTTAACATTGGTTTTTGTCCAGAAATTAGAAAGTCAAAATCAAAGAAAATGGATGGTCAACCTTCAAAAAATTTAATGGCTGAGAGGAGGAGGAGAAAAAGGCTTAATGATAGACTCTCTATGCTTAGATCAGTTGTTCCAAAGATTAGCAAGATGGATAGAACTTCAATACTTGGGGATACTATAGACTACATGAAGGAGCTACTAGAGAAAATCAATAATTTGCAAGAAGAAATGGAACTTGGACCAAATCAACTAAGCTTGATGAGCATTTTCAAAGATGTAAAACCAAATGAAATGCTTGTGAGAAATTCACCTAAGTTTGATGTGGAAAGGAGAAGTGTTGATACAAAAGTTGAGATATGTTGTGCAGGGAAGCCTGGTCTGTTGTTATCAACAGTGACCACACTAGAGGCTTTAGGTCTAGAGATTCAACAGTGTGTAATCAGCTCATTTAGTGATTTTGCAATGCAAGCTTCTTGTTCTGAGGAAATGGAGCAGAGAGGAGTTGTGAGTTCAGAAGACATAAAGCAAGCATTGTTCAGAAATGCTGGATATGGAGGGAGGTGTCTGTAAGAAGCCATGTGGACTAAATCTAGAAGAAGAAAAAAAAGGGAAAAGTTTTTTTAATTTTTTTTTGGATTTTCTATCGTTGTCTAAACTGTGATTGAAGTCCGAAGTAAATTTGAATCATGTGGTGCATATTTAGTGGCAACGTCTTCAACAAGAGAATCGAATCCTTCTCTATACCAAAGACTCTGACTAAAGATGAAACAGTGGTGACACTATAATCTATATTTGATTTAAAAATTATTATTATTGGTTACTTGG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc00g050430.2.1SL2.50ch00:13663933..13665910344+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc00g050430.2SL2.50ch00:13663836..136661652,330+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc00g050430.2.1.1SL2.50ch00:13663836..13664542707+n/a
exonexon:Solyc00g050430.2.1.2SL2.50ch00:13665082..13665249168+n/a
exonexon:Solyc00g050430.2.1.3SL2.50ch00:13665389..13665556168+n/a
exonexon:Solyc00g050430.2.1.4SL2.50ch00:13665824..13666165342+n/a
intronintron:Solyc00g050430.2.1.1SL2.50ch00:13664543..13665081n/a+n/a
intronintron:Solyc00g050430.2.1.2SL2.50ch00:13665250..13665388n/a+n/a
intronintron:Solyc00g050430.2.1.3SL2.50ch00:13665557..13665823n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17663829%2Fdetails feature 17663829
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