Solanum lycopersicum mRNA Solyc01g005000.2.1

mRNA details  
Name
Solyc01g005000.2.1
Type
mRNA
Length
1,717
Organism
Solanum lycopersicum
Description
Glutamate decarboxylase (AHRD V1 ***- Q1I1D8_CITSI); contains Interpro domain(s) IPR010107 Glutamate decarboxylase
Location(s)
SL2.50ch01:12963..15149
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006536
  • GO:0030170
  • GO:0019752
Length
2187
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g005000.2.1 Glutamate decarboxylase (AHRD V1 ***- Q1I1D8_CITSI); contains Interpro domain(s) IPR010107 Glutamate decarboxylase

ACACAAACAAACAAACTTTAATTAATTCTCCAAAAACTTTTTAATTATTTACAACAACATAATGGTTCTCTCAAAAACTCCTTCTGATGATTCTGTACACTCCACATTTGCTTCTCGCTATGTTCGAACTTCACTACCAAGGTTTGAGATGCTAGAGAAGTCTATACCAAAAGAGGCAGCATACCAAATGATTAATGATGAGTTAATGCTTGATGGGAATCCAAGGTTAAATTTGGCATCATTTGTAACCACATGGATGGAACCAGAATGTGATAAGCTTATGATGGCTTCAATTAACAAGAATTATGTTGACATGGATGAATACCCTGTCACCACTGAGCTTCAGAATCGATGTGTAAACATGATAGCGCGTTTATTCAATGCGCCTTTGAAAGAGGAAGAAATAGGAATTGGTGTGGGGACAGTGGGGTCATCAGAGGCCATAATGTTAGCAGGGCTGGCCTTCAAGAGGAACTGGCAAAACAAACGCAAAGCTGAGGGAAAGCCTTATGATAAGCCCAACATTGTCACTGGTGCTAATGTTCAGGTGTGTTGGGAGAAATTTGCAAACTACTTTGAAGTGGAATTGAAACAAGTCAAGTTAAGTGAAGGGTACTATGTGATGGACCCAATCAAAGCTGTGGAAATGGTAGATGACAACACTATTTGTGTTGCTGCTATTTTGGGTTCAACACTTAATGGAGAATTTGAAGATGTCAAACTCTTGAATGATCTTTTGATTGAAAAGAATAAACAAACTGGATGGGACACACCTATTCATGTGGATGCAGCAAGTGGTGGATTCATTGCACCATTTATCTATCCAGAGTTGGAATGGGATTTTAGGCTTCCTTTAGTGAAAAGTATTAATGTGAGTGGACACAAATATGGGCTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGAACTAAACAAGACTTGCCTCAACAACTCATTTTTCATATCAATTATCTTGGTGCTGATCAGCCTACTTTTACTCTCAATTTCTCTAAAGGTTCAAGTCAAGTCATTGCTCAATATTATCAGCTTATCCGCTTGGGCTATGAGGGATATCGAAATGTAATGGAAAATTGTCGTGAAAATGCAATTGTGCTAAGAAAAGGACTTGAAAAAACAGGACGTTTCAATATAATCTCCAAAGATGAAGGTATACCCTTGGTGGCATTTTCCCTCAAAGACAATAGCCTCCACAACGAATTCGAGGTCTCTGAGACCCTCCGTAGGTTTGGGTGGATTGTCCCAGCCTACACTATGCCAGCTGACCTGCAACATGTTACAGTGTTGCGCGTTGTGATTAGAGAGGACTTCTCCCGAACCCTAGCAGATCGTCTTGTCTCTGACATCGTCAAGGTCCTCCACGAGCTCCCGAATGCCAAAAAAGTGGAGGATAATTTGATGATCAATAATGAGAAGAAAACAGAAATTGAAGTTCAAAGGGCAATTGCTGAGTTTTGGAAGAAATATGTTTTAGCTAGGAAAGCATCTATTTGTTAGGGAAGGATTAATGGTTGTTTTGAAGGAATAAGTATTAATTACTAGTAACGTTTTGGTATTAATTATAAAAAATGTGAAAAGAATTGATGAATGTATCATCCTTTGTTCTATTGAATTGAATATTATATTATGTTACATCTCTTTGTATTATTATGTCTTGTACTGACTTTTGTTAATTTATTTAATTATATTTATTTTTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g005000.2.1SL2.50ch01:13023..14948485+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g005000.2SL2.50ch01:12963..151492,187+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g005000.2.1.1SL2.50ch01:12963..13103141+n/a
exonexon:Solyc01g005000.2.1.2SL2.50ch01:13177..13381205+n/a
exonexon:Solyc01g005000.2.1.3SL2.50ch01:13461..13661201+1
exonexon:Solyc01g005000.2.1.4SL2.50ch01:13739..13953215+n/a
exonexon:Solyc01g005000.2.1.5SL2.50ch01:14033..14286254+n/a
exonexon:Solyc01g005000.2.1.6SL2.50ch01:14372..1442453+1
exonexon:Solyc01g005000.2.1.7SL2.50ch01:14502..15149648+2
intronintron:Solyc01g005000.2.1.1SL2.50ch01:13104..13176n/a+n/a
intronintron:Solyc01g005000.2.1.2SL2.50ch01:13382..13460n/a+n/a
intronintron:Solyc01g005000.2.1.3SL2.50ch01:13662..13738n/a+n/a
intronintron:Solyc01g005000.2.1.4SL2.50ch01:13954..14032n/a+n/a
intronintron:Solyc01g005000.2.1.5SL2.50ch01:14287..14371n/a+n/a
intronintron:Solyc01g005000.2.1.6SL2.50ch01:14425..14501n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17666037%2Fdetails feature 17666037
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