Solanum lycopersicum mRNA Solyc01g005330.2.1

mRNA details  
Name
Solyc01g005330.2.1
Type
mRNA
Length
2,562
Organism
Solanum lycopersicum
Description
microtubule associated protein Type 1 (AHRD V1 **-* Q9C9X0_ARATH); contains Interpro domain(s) IPR009768 Myosin II heavy chain-like
Location(s)
SL2.50ch01:232356..237013
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
4658
Nb exon
11
Sifter term
GO:0008017
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g005330.2.1 microtubule associated protein Type 1 (AHRD V1 **-* Q9C9X0_ARATH); contains Interpro domain(s) IPR009768 Myosin II heavy chain-like

ATCAACACAGCTAACACACAACTCACTCACACACTCTCTCTCTCTTAATCAGATTTTTTAGAGAGAGAAAAACAAACTCCCCAAATCACTGTATTTTAGTGAGAGAAACACACTACTACTATCATTTTGAACTTAAACATTCCACACACTTTCTCTCTCTAAAAGTATACAATTATGTATATATAGAGAGTTTTTTTTTTGTAGGTATAAATCTCTGTGGAAGTAATTTTTGGTGTATTGGATGTGAGAGAAGAAAGGTGTAAAAAAGTTGAACGGAGATGTCGGAGTTTTCCGGCGAGTTATCGGAGTTCAGTTCCGGAGAAAACGGCGTCGGTGGAGGAGGCAATGTGCGTGAGACGACGCCGTTGACAGTGTCGGCGTCGTTTAAGGAAGGGAAGAGTTCACGGAGGAAGACGGCGGTGATGAGGCCAAGCCTTGATGCGGATGAGTTCTTTAACCTTCTTCATGGTTCGGATCCGGTGAAATTGGAGCTCAATCGACTTGAGAATGAAGTCAGAGATAAGGACCGGGAATTGACTGAAGCTCAAGCGGAGATCAAGGCACTGAAGTTATCAGAGAGATTACGAGAAAAGGCTGTTGAAGAGCTCACGGATGAGTTGTCAAGGGTCGACGAGAAGCTTAAGTTGACAGAATCTCTTTTAGAAAGCAAGAATCTTGAAATTAAGAAAATTAATGATGAGAAGAAAGCATCAATGGCAGCTCAATTTGCAGCAGAAGCCACTCTTAGAAGGGTCCATGCTGCCCAAAAAGATGATGATATGCCGCCTATTGAAGCCATCCTTGCACCTTTGGAGGCCGAACTCAAACTTGCACGTCAGGAGATTGCAAAGCTGCAAGATGATAATAAAGCACTGGATCGTCTTACAAAGTCGAAAGAGGCAGCTTTACTTGAAGCTGAGAGAACTGTGCAGTCAGCATTAGCAAAAGCTTCTATGGTGGATGACCTTCAGAACAAGAACCAAGAGTTGATGAAACAGATAGAAATATGCCAGGAAGAAAATAAAATATTGGACAGAATGCATCGCCAAAAGGTTGCAGAGGTTGAAAAGCTTACCCAAACAGTACGTGAGCTTGAGGAGGCTGTTCTTGCTGGTGGTGCAGCTGCTAATGCTGTCCGGGATTATCAACGGAAAGTTCAAGAGATGAATGAAGAAAGAAAAACACTTGATCGAGAGCTGGCACGTGCCAAGGTAACAGCTAATAGGGTAGCAACTGTGGTTGCTAATGAGTGGAAAGATGCCAATGATAAAGTAATGCCTGTGAAACAATGGCTTGAAGAAAGGAGGTTTTTGCAGGGTGAGATGCAAACGTTGCGTGACAAGCTCACAGTCACTGAACGAGCTGCTAAATCAGAAGCCATGTTAAAGGAGAGATATCAACTGAGGCTTAAGGTCCTTGAAGAAACATTAAGATCATCCAGCTCAGCTACTCGCAGTACACCAGATGGTAGAAGTTCAAGCAATGGTCCTTCACGCCGGCAATCACTGGGAGGCGCTGAGAACATCTCCAAATTAACTTATAATGGCTTTTTACCAAAGAGATCACCATCATTTCAGCTTAGATCTTCTGGGTCCAGCACAGTGCTGAAGAATGCTAAAGGGACATCAAAGTCATTTGATGGTGGCTCAAGGTCATTGGACAGGGGAAAAAACCTTCTGAATGGCACAGGTCCAAATTTCAACAGCAGCAAGTCGTGTGATGGAACCAAAGACAATGAGACTGAGAATAGTTCCTGGAAAGCAAGTCAAGTTGAAAAAAGCAATGACACACAAGTGACAGAAACAGAAGACACTATACCTGGAATATTATATGATTTGCTGCAAAAGGAAGTAGTTGCTTTGAGGAAAGCAGGTCATGAGAAGGATCAGAGTCTTAAAGACAAGGATGACGCCATTGAGATGTTAGCTAAGAAAGTGGAGACTTTAACAAAAGCCATGGAGGTTGAGGCTAAAAAAATGAGAAGGGAGGTTGCTGCCATGGAGAAGGAGGTGTCTGCCATGCGGGTTGAGAAAGACCAAGAGAATAGAGCCAAAAGATTTGCAAATTCAAAGGGTCCAGTGAGCAGTTCTCAGCTGCCTCCAGGAAGAAATGTAGCTCGAAGTGGGTTAACACGCAACATTCAATAACAATAAGAGGAAACTCCAACTACTACAGCTCTGAGAAGATATTCTGCATAGACTTGCTGTATTCCTAGTCTACTTGACAACTCTACTATTTTCCACTAATGGTTTATTGTAAAATTGTAACAAAGCATGCCAATGACTATATGATCGAAGTCTATCCAAACACTGGAAAAGGCCGGTAGATGAAATGTGGTGTGCTTCTGACTTTGACTATGATCCCCTTCTGCTTAGATATCAGCTTGGAAAGGTACTCAAGTTATCAAAGTTGAGCTAACTTTTTCGCCGAACAGCTTGAGTAGCAGTGGTGGTGTGGTTGTATAGGTAGCTCTTGGCATTTACTTTGCTCTATACTCTTTTTCTCAACTTGTTTGCAGTCTATATTTGTAATCTGCAGCTTAATTGTTATGATATGTTATTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g005330.2.1SL2.50ch01:232770..236735623-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g005330.2SL2.50ch01:232356..2370134,658-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g005330.2.1.1SL2.50ch01:236495..237013519-2
exonexon:Solyc01g005330.2.1.10SL2.50ch01:233257..233444188-1
exonexon:Solyc01g005330.2.1.11SL2.50ch01:232356..232810455-n/a
exonexon:Solyc01g005330.2.1.2SL2.50ch01:236313..23639886-n/a
exonexon:Solyc01g005330.2.1.3SL2.50ch01:235355..23542066-n/a
exonexon:Solyc01g005330.2.1.4SL2.50ch01:235104..235274171-n/a
exonexon:Solyc01g005330.2.1.5SL2.50ch01:234845..235015171-n/a
exonexon:Solyc01g005330.2.1.6SL2.50ch01:234568..234723156-n/a
exonexon:Solyc01g005330.2.1.7SL2.50ch01:234323..234469147-n/a
exonexon:Solyc01g005330.2.1.8SL2.50ch01:234138..23420972-n/a
exonexon:Solyc01g005330.2.1.9SL2.50ch01:233525..234055531-n/a
intronintron:Solyc01g005330.2.1.10SL2.50ch01:233445..233524n/a-n/a
intronintron:Solyc01g005330.2.1.11SL2.50ch01:232811..233256n/a-n/a
intronintron:Solyc01g005330.2.1.2SL2.50ch01:236399..236494n/a-n/a
intronintron:Solyc01g005330.2.1.3SL2.50ch01:235421..236312n/a-n/a
intronintron:Solyc01g005330.2.1.4SL2.50ch01:235275..235354n/a-n/a
intronintron:Solyc01g005330.2.1.5SL2.50ch01:235016..235103n/a-n/a
intronintron:Solyc01g005330.2.1.6SL2.50ch01:234724..234844n/a-n/a
intronintron:Solyc01g005330.2.1.7SL2.50ch01:234470..234567n/a-n/a
intronintron:Solyc01g005330.2.1.8SL2.50ch01:234210..234322n/a-n/a
intronintron:Solyc01g005330.2.1.9SL2.50ch01:234056..234137n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17666444%2Fdetails feature 17666444
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)