Solanum lycopersicum mRNA Solyc01g008900.2.1

mRNA details  
Name
Solyc01g008900.2.1
Type
mRNA
Length
1,612
Organism
Solanum lycopersicum
Description
Genomic DNA chromosome 3 P1 clone MJL14 (AHRD V1 **-- Q9LJG2_ARATH); contains Interpro domain(s) IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit
Location(s)
SL2.50ch01:2920931..2926342
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0008152
Length
5412
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g008900.2.1 Genomic DNA chromosome 3 P1 clone MJL14 (AHRD V1 **-- Q9LJG2_ARATH); contains Interpro domain(s) IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit

TAGAGAAATTTCTGTGGCAATATCACTTCAGTTCTTGTTACACAAATTGCAGCAGAGAGACAAATGATTCTTCAAAATTGAACAGAAAAATGTTGAAATGCACAAAGTTTCAATGGCAGCAGCCAAGAAATGGGTTGATTTTATCTTCTGCATTCAACCTTCATTGTGGTTCATCTCCTAATGCTCTCAAGGAAACATCGAAATCCAATTTGCCTAAGGAGGAGCATGTGTCCAGATTTCTTAAGAGGAAATGGGCATTGAGAAGCCCAGATACCAAAATTAACCAAATAACGATATCAAAAGATGATGTTCAACAGGGAGGTGAATATCTTGGGAATGTTTCCTTTCTGAATAATCCACAACCGTCTTTGGGTGATCACATGACGAGAAACAACCGACAGCAACCTTCATTTTATGTTGTAAGAGATGATTTGTTGCATCCTTTGGTGAATGGTAATAAGGCGAGGAAACTGGATGCACTACTCCCTCTCTTGGAAGATAGTTCTGTCACAGATGTTGTCACATGTGGAGGGTGCCAAAGTGCGCATGCTGCAGCTGTTGCTGTGTCATGTGCTGAAAGGGGATTGAAGTCACATTTACTTCTCCGAGGAGAACAACCATCAACGTTGACGGGTTACAATCTAATTTCAACATTATATGGAAATGTTAGTTATGTTCCGAGATCTCTATATGCTAGGAGGGAGGAGATGCTCTTAAAGCATGCACATATTGTCGCAGGAAATGATGGCTTAGTTTTCTCACTTTCTGATTTAGAGGCTTCTTTATTCTCTCATGGATGCGGTGAACACTCCTCACACGTTGATTCTCTTACAAAAAGGAGTAAGAAGATAGCTATTATAAACGAAGGGGCTGGAGATGCTGCTGCATTGCTAGGTGTTGTGCGCCTTGTTGAGTACTTGTCTCGGGATCATCTATTTGGGATAGATCAGCAGTTAAAAATTATTATAGATGCTGGAACAGGAACAACCGCTGTTGGTCTTGGAATTGGAGCCGTGTGCTTAGGGCTCCCATGGGAGGTCACTGCTGTTATGCTAGCTGACACTATTGATGGATACCGGAAAAAGGAGGAAAGTTTAATTTCTGAATTCCGTAGATGCTTTACTCTTCATCTTGACGAGCAAATGCTAACCGGATTGGAACCTGGACTTGTGCACTGGGTTGAACGTAGCTCTCCGAGAAAATTTGGCAATATACTGAAGGGGGAAGTTGAAATATGTCGAAAGATTGCTCAAGAAACGGGTATTCTTCTCGATCCGGTTTACACTTTGGCTGCTTGGGAACTGGCAACTCAACTTGGTCAGGAGGAATGTGCAAAAGTGGTAATGCTTCACACAGGAGGTACACTCGGTATGTTTGGTCTAGCTCAACGTTACAAATCTTACTTCGAGATATGCTGAACGATGAAATATTGCAGCTTATAATGCTAGTAACTTTTATGTTATGATATTATCGTTAAGGAATGAGACTTGAATCCCACATCGGTTAAATGAGGAGCTGATGTGGGGCTTATATAGCCTTTGGTGTGATGTCCCGCCACTTTGCCAGTTAAATTTTGCATCCGGATGCACGGAGCTTTAGTGAGACTCTAAGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g008900.2.1SL2.50ch01:2921019..2926148443+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g008900.2SL2.50ch01:2920931..29263425,412+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g008900.2.1.1SL2.50ch01:2920931..2921121191+n/a
exonexon:Solyc01g008900.2.1.2SL2.50ch01:2922623..2922949327+n/a
exonexon:Solyc01g008900.2.1.3SL2.50ch01:2923818..292386043+n/a
exonexon:Solyc01g008900.2.1.4SL2.50ch01:2923988..2924320333+n/a
exonexon:Solyc01g008900.2.1.5SL2.50ch01:2924720..2924849130+2
exonexon:Solyc01g008900.2.1.6SL2.50ch01:2924925..2925101177+2
exonexon:Solyc01g008900.2.1.7SL2.50ch01:2925932..2926342411+1
intronintron:Solyc01g008900.2.1.1SL2.50ch01:2921122..2922622n/a+n/a
intronintron:Solyc01g008900.2.1.2SL2.50ch01:2922950..2923817n/a+n/a
intronintron:Solyc01g008900.2.1.3SL2.50ch01:2923861..2923987n/a+n/a
intronintron:Solyc01g008900.2.1.4SL2.50ch01:2924321..2924719n/a+n/a
intronintron:Solyc01g008900.2.1.5SL2.50ch01:2924850..2924924n/a+n/a
intronintron:Solyc01g008900.2.1.6SL2.50ch01:2925102..2925931n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17670386%2Fdetails feature 17670386
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