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Solanum lycopersicum mRNA Solyc01g008960.2.1

mRNA details  
Name
Solyc01g008960.2.1
Type
mRNA
Length
3,183
Organism
Solanum lycopersicum
Description
Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch01:2976372..2984961
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
8590
Nb exon
23
Sifter term
GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g008960.2.1 Argonaute 4-like protein (AHRD V1 ***- D5FQ91_PELHO); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

CACTCTCTCATAAATTTGTCACTCTCCCTCCTTCTCCTCTCTTCCATTTAGGGTTTTGTTCTTGATTTTGGTGCTTCATCTGCCTCTTTTGAGCAGAAGATAGGATCCTGATATGGCTGAAGAAGAAACAAATGGAGCAGCAGCAGAGGGTCTGCCACCTCCTCCCCCTGTTCCACCAGATTTCACTCCTGCTAAAACTGAAATTGAGCCTGTGAAGAAAAAGATCTTGCGCGTTCCCATGGCCAGGCGTGGTGTTGGAAATAAGGGACAAAAGATTCAAATACTTACTAATCACTTTAAAGTGAATGTAAACAATGTGGATGGACACTTCTTCCACTACAGTGTTGCCTTATTCTATGAAGATGGTCGACCAGTTGATGGGAAGGGAGTTGGAAGGAAGGTGTTAGACACAGTGCACGAAACTTATGATACAGAATTAGCTGGAAAGGACTTTGCCTATGATGGTGAAAAAAGCTTGTTTACCATTGGAGCACTCCCTAGGAATAAAATGGAGTTCACTGTTGTCCTTGATGACGTGATATCAAATAGGAACAATGGTAACAGCAGCCCCGGTGGGCATGGTAGTCCTAATGAAGCTGACAGGAAGAGGTTACGTCGTCCTTACCAGTCAAAAACTTTCAAGGTGGAGATCAGTTTTGCTGCCAAAATCCCGATGCAGGCGATTGCAAATGCTCTGCGTGGTCAAGAGTCAGAGAACTCTCAAGAAGCCTTGCGAGTCTTGGATATTATTTTGAGGCAGCATGCTGCAAAGCAGGGTTGCCTGCTTGTTCGACAATCCTTTTTCCACAATGATCCCAAGAACTTTGTTGATGTCGGCGCTGGTGTGCTTGGTTGTCGAGGATTCCATTCCAGCTTCCGGACTACCCAGAGTGGCTTGTCTTTGAACATTGATGTGTCTACAACAATGATTATCCAGCCTGGGCCTGTCGTGGACTTCTTGATTGCAAATCAAAATGCAAAGGATCCCTTTTCACTGGATTGGGCAAAGGCAAAACGTGTGCTCAAGAATTTGAGGGTGAAGACAACCCCCACTAATCAAGAGTACAAGATTACTGGACTGAGTGACCGTCCTTGTCGTGAGCAACTATTTACCCTGAAGCAGAAAGGAAAAGATGCAGATGGTGAGGTCCAAACTACTGAAGTTACTGTGTTCGATTACTTTGTCAACCACCGCAACATAGAGTTGCGTTATTCTGCTGATTTACCCTGCATAAATGTTGGGAAACCAAAGCGTCCCACCTTTTTCCCAATTGAGCTATGTTCCTTGGTGTCTTTGCAAAGATACACAAAATCCTTGTCCACATTCCAGAGGTCTTCACTAGTTGAGAAATCAAGGCAAAAGCCTCAGGAGAGGATGCAAGTCTTAAGCAATGCTCTCAAAATCAACCAATATGATGCTGAGCCTCTGCTTCGTTCCTGTGGAATATCCATTAGCAATAACTTCACTCAGATTGAAGGACGTGTTCTTCCTCCCCCAAAGCTGAAGACGGGCGGTGATGACTTTGTCCCTCGTAATGGCAGATGGAATTTCAATAATAAGAGACTAGTTGATCCCACTAAGATAGAACGCTGGGCCGTTGTCAATTTTTCTGCACGCTGCAATGTACAAGGGCTAGTCAGTGATCTGATCAAATGTGGAAAACAGAAAGGAATTATGGTGGAAGACCCATTTGATGTCTTTGAGGAGTCTCCACAAGTCAGGAGGGCTCCACCACTTGTGAGGGTTGAGAAGATGTTTGAGCAGGTTCAATCCAAGCTACCCGGGGCACCTAAATTCCTGCTTTGTTTGCTTCCTGAGAGGAAAAACTGTGATGTATACGGACCATGGAAGCGAAAGAATCTTGCTGAGTATGGCATTGTTACCCAGTGTATAGCTCCAACAAGAGTCAATGATCAATATATCACCAATGTGCTCCTGAAGATAAACGCGAAGCTTGGAGGTTTGAACTCTATGTTAACTGTTGAACATTCTCCTGCAATCCCTATGGTGTCTAAGGTCCCTACCATTATTCTTGGGATGGATGTGTCCCATGGCTCTCCTGGCCAATCTGATGTCCCTTCAATTGCAGCGGTTGTCAGTTCAAGGCAGTGGCCATCAATATCTCGTTACAGAGCTTCAGTTCGTACTCAGTCTCCTAAAGTGGAGATGATAGACAACTTGTTTAAACGTACCTCTGATACTGAAGATGATGGAATAATGAGGGAGGCGTTGCTAGATTTTTATGTGAGCTCTGGAAAAAGGAAGCCCGAGCATATAATAATATTCAGGGATGGTGTCAGTGAATCTCAGTTTAGTCAAGTTCTGAATGTTGAGCTGGACCAGATTATTGAGGCTTGTAAGTTTCTTGATGAGAAGTGGTCACCCAAGTTTGTGGTGATAGTTGCCCAGAAGAACCATCATACCAAGTTTTTCCAGCCTAATGATCCTAACAATGTTCCTCCAGGCACAATCATAGACAACAAAGTCTGTCACCCAAGGAATTATGACTTTTACCTGTGTGCTCATGCTGGAATGATTGGTACAACTCGTCCTACTCACTATCACGTCTTGTATGATGAGCTGGGTTTCTCTGCTGATGATCTTCAAGAGCTTGTTCATAATCTCTCTTATGTGTACCAGAGAAGCACCACTGCAATATCTGTTGTTGCTCCTATCTGTTATGCCCATCTTGCTGCTACTCAAATGGGACAGTGGATGAAGTTTGAAGATGCATCAGAGACTTCCTCAAGTCATAATGGAGTAACCAATGCTGGACCAGTCTCCGTTCCTCAGCTTCCAAAGCTCGAGGAGAAAGTTTCCAGTTCTATGTTCTTTTGCTAAGGCGCGTAACGCCTTCATGCTTTTCTTTTTTATGTGTGGTTTGTGAATAGTTTCTGGTTCAAAACTCTTTTGAGAAGACGGTGGTAGTTAAATATTTTGTCTAGACTTAAATAGGTAAATCACTCTGCTAAAAGATTTCACATCTTTTGGCTCTGTGGTTTGCTATCTCTTTTAACTTATCCTGGATCATGTACTTATGTTTTGGTGGTGTTTTTAAGTTATGGACATGACTAGTAGTTTCTCTATACTTGTGCCTCCTTCCATTGCTTTTGTTTTATCAGTTTTGTGTTTATAAAACTTGTTAGCTAGTATTACCAGCAGGTGTAATGTGAAAGATTTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g008960.2.1SL2.50ch01:2978866..2984620910+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g008960.2SL2.50ch01:2976372..29849618,590+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g008960.2.1.1SL2.50ch01:2976372..297647099+n/a
exonexon:Solyc01g008960.2.1.10SL2.50ch01:2980877..2980984108+n/a
exonexon:Solyc01g008960.2.1.11SL2.50ch01:2981073..298113260+n/a
exonexon:Solyc01g008960.2.1.12SL2.50ch01:2981238..2981351114+n/a
exonexon:Solyc01g008960.2.1.13SL2.50ch01:2981446..2981611166+n/a
exonexon:Solyc01g008960.2.1.14SL2.50ch01:2981713..2981825113+n/a
exonexon:Solyc01g008960.2.1.15SL2.50ch01:2981942..2982079138+2
exonexon:Solyc01g008960.2.1.16SL2.50ch01:2982273..2982403131+n/a
exonexon:Solyc01g008960.2.1.17SL2.50ch01:2982703..298276866+n/a
exonexon:Solyc01g008960.2.1.18SL2.50ch01:2983249..298331264+1
exonexon:Solyc01g008960.2.1.19SL2.50ch01:2983409..2983520112+1
exonexon:Solyc01g008960.2.1.2SL2.50ch01:2978854..2979097244+n/a
exonexon:Solyc01g008960.2.1.20SL2.50ch01:2983597..298367074+n/a
exonexon:Solyc01g008960.2.1.21SL2.50ch01:2984108..298420295+2
exonexon:Solyc01g008960.2.1.22SL2.50ch01:2984323..298435432+n/a
exonexon:Solyc01g008960.2.1.23SL2.50ch01:2984445..2984961517+1
exonexon:Solyc01g008960.2.1.3SL2.50ch01:2979192..2979397206+n/a
exonexon:Solyc01g008960.2.1.4SL2.50ch01:2979482..2979706225+n/a
exonexon:Solyc01g008960.2.1.5SL2.50ch01:2979791..2979927137+1
exonexon:Solyc01g008960.2.1.6SL2.50ch01:2980015..298011298+1
exonexon:Solyc01g008960.2.1.7SL2.50ch01:2980193..298029098+2
exonexon:Solyc01g008960.2.1.8SL2.50ch01:2980422..2980590169+n/a
exonexon:Solyc01g008960.2.1.9SL2.50ch01:2980679..2980795117+1
intronintron:Solyc01g008960.2.1.1SL2.50ch01:2976471..2978853n/a+n/a
intronintron:Solyc01g008960.2.1.10SL2.50ch01:2980985..2981072n/a+n/a
intronintron:Solyc01g008960.2.1.11SL2.50ch01:2981133..2981237n/a+n/a
intronintron:Solyc01g008960.2.1.12SL2.50ch01:2981352..2981445n/a+n/a
intronintron:Solyc01g008960.2.1.13SL2.50ch01:2981612..2981712n/a+n/a
intronintron:Solyc01g008960.2.1.14SL2.50ch01:2981826..2981941n/a+n/a
intronintron:Solyc01g008960.2.1.15SL2.50ch01:2982080..2982272n/a+n/a
intronintron:Solyc01g008960.2.1.16SL2.50ch01:2982404..2982702n/a+n/a
intronintron:Solyc01g008960.2.1.17SL2.50ch01:2982769..2983248n/a+n/a
intronintron:Solyc01g008960.2.1.18SL2.50ch01:2983313..2983408n/a+n/a
intronintron:Solyc01g008960.2.1.19SL2.50ch01:2983521..2983596n/a+n/a
intronintron:Solyc01g008960.2.1.2SL2.50ch01:2979098..2979191n/a+n/a
intronintron:Solyc01g008960.2.1.20SL2.50ch01:2983671..2984107n/a+n/a
intronintron:Solyc01g008960.2.1.21SL2.50ch01:2984203..2984322n/a+n/a
intronintron:Solyc01g008960.2.1.22SL2.50ch01:2984355..2984444n/a+n/a
intronintron:Solyc01g008960.2.1.3SL2.50ch01:2979398..2979481n/a+n/a
intronintron:Solyc01g008960.2.1.4SL2.50ch01:2979707..2979790n/a+n/a
intronintron:Solyc01g008960.2.1.5SL2.50ch01:2979928..2980014n/a+n/a
intronintron:Solyc01g008960.2.1.6SL2.50ch01:2980113..2980192n/a+n/a
intronintron:Solyc01g008960.2.1.7SL2.50ch01:2980291..2980421n/a+n/a
intronintron:Solyc01g008960.2.1.8SL2.50ch01:2980591..2980678n/a+n/a
intronintron:Solyc01g008960.2.1.9SL2.50ch01:2980796..2980876n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17670450%2Fdetails feature 17670450
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