Solanum lycopersicum mRNA Solyc01g010050.2.1

mRNA details  
Name
Solyc01g010050.2.1
Type
mRNA
Length
1,843
Organism
Solanum lycopersicum
Description
S-adenosylmethionine decarboxylase proenzyme (AHRD V1 **** Q7XZQ9_VITVI); contains Interpro domain(s) IPR001985 S-adenosylmethionine decarboxylase
Location(s)
SL2.50ch01:4683610..4687162
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008295
  • GO:0004014
Length
3553
Nb exon
4
Sifter term
GO:0004014
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g010050.2.1 S-adenosylmethionine decarboxylase proenzyme (AHRD V1 **** Q7XZQ9_VITVI); contains Interpro domain(s) IPR001985 S-adenosylmethionine decarboxylase

CACAGCAATCATCTCTCAAGTTAGGGTTTCATCTCTGGTTTTTCTTCTTCAACAATCGTAATTTCTCTGATCTGATAATCTTGGAGGTTGATTTTAATTTGTTCAGAAAAGTCAGATTCAGAAAAAATCTGAGAATTTTGATAATTATTCAGGTGAATGATCTAATGGAGTCTAAAGGTGGGAAGAAGTCTAGTAGTAAATCCTCACTCTATGAAGCACCCCTTGGCTACAGTATTGAAGACGTTAGACCAAACGGTGGAATCAAGAAGTTCAGATCTGCTGCTTACTCTAACTGCGCTCGCAAACCTTCCTGACATTCCTTAAGCTTCTATTCTAGTCTAGCACGTGTCTCCTGACACAAAAAATCCCAAAAAAAGCTTTTTCTTTCAATTAGTTCGTGTTAAACCCTCACTCTTTTTCCCCTCCTTCAACTGCTTTCTGCATTTGCTCTCCTTGTTTGTGAACAATTTCCTCTAAAGGAGCATTAGTTGCTGGGAACATTTTTCATCATGGTGGCATTGCCAGTTTCTGCCATTGGTTTTGAAGGTTATGAGAAGAGGCTTGAAATTTCATTTTTTGAGCCTGGCCTTTTTGCTGATCCCGAAGGAAAAGGACTTCGATCACTGTCAAAAGCACAATTGGATGAGTTCCTAGGACCTGCTGAGTGCACCATAGTTGATTCTCTTTCTAATGAGTGTGTTGACTCCTATGTCCTTTCTGAGTCCAGCCTCTTCATTTATCCTTACAAGATAGTCATCAAGACATGTGGTACCACAAAGTTGCTTCTCTCAATTCCGGTCATCCTGAAGTTGGCTGATACCCTTTCGCTCAAAGTACAAGCGGTGAAGTATACCCGTGGGAGCTTCATCTTCCCTGGTGCCCAGTCATTTCCTCATCGTCACTTCTCTGAAGAAGTTGCGGTCCTTGATAGCTACTTTGGAAATCTTAGTTCAGGCAGCAAAGCTGTAATTTTGGGCAGTCATGACAATCTTCAAAAATGGCATGTTTACTCTGCCTCTGCTGGATCGATTCAGACTAAGAACCCTGTCTACACTCTTGAGATGTGCATGACTAATCTGTTAAGGAAGAAGGCTTCTGTCTTTTACAAGACTGAATCAAGCTCGGCAGCTGAAATGACTATTAGATCCGGCATAAGGAAGATCCTCCCTAACTCTGATATATGTGATTTCGAGTTTGATCCTTGTGGTTATTCCATGAATTCTATTGAAGGAGCTGCGCTTTCTACTATTCATGTTACACCAGAAGATGGTTTTAGTTATGCTAGCTTTGAAGCAGTTGGGTATGATTTGAACTCCTCGAGTCTCGGGTCACTGGTTAGGAGGGTGCTGACATGTTTCCAGCCTGATGAATTTTCTGTTGCTTTGCATGCTGATTATGTTGCTTGTGAGCTACTGGAGCGCATTTGCTCTTTTGACGTTAAGGGCTACTCTCACGCTGAGTGGAGCCCAGAAGAACTTGGTAAGGGTGGTTTGATTGTCTACCGGAAGTTCACTAGGAGTTCCCTCTGTGGATCTCCCAAATCTGTTCTGCAGGACTGCTGGAACGAAGAAGAGAAGAGAAACGAAGTAAAGGAGGTGTGTTGAGGGTTGTTTAGTTCAATTACCAGTGTTGTTTGCAGATGTTTTACTATGTTTGGTTGCGTTGCGCCTTTGTTTTCTCCAAATAAATGGGCTTTATGTCCTTAGAATTAGTAACAAAAACTTTGAACTTAGTTTGCTCTTTTGCTTGTATATTGGATTATTTCCGTATTTTGTTGTTCTCAAACTCGTTTGTTATTTGGTTATCCCTAATAAATGTGTGTTGTCCAGTGATTTTATGTTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g010050.2.1SL2.50ch01:4685828..4686923365+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g010050.2SL2.50ch01:4683610..46871623,553+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g010050.2.1.1SL2.50ch01:4683610..468367768+n/a
exonexon:Solyc01g010050.2.1.2SL2.50ch01:4683769..468384678+n/a
exonexon:Solyc01g010050.2.1.3SL2.50ch01:4685361..4685507147+n/a
exonexon:Solyc01g010050.2.1.4SL2.50ch01:4685613..46871621,550+n/a
intronintron:Solyc01g010050.2.1.1SL2.50ch01:4683678..4683768n/a+n/a
intronintron:Solyc01g010050.2.1.2SL2.50ch01:4683847..4685360n/a+n/a
intronintron:Solyc01g010050.2.1.3SL2.50ch01:4685508..4685612n/a+n/a
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Related views  
Genetic loci
 http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17671729%2Fdetails feature 17671729
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