Solanum lycopersicum mRNA Solyc01g010130.2.1

mRNA details  
Name
Solyc01g010130.2.1
Type
mRNA
Length
2,244
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch01:4870120..4873334
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3215
Nb exon
8
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g010130.2.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

CTTGTTCCTTCAATTTCTCTACCTGTATGGATGTGTAATGAAGTGGAGGCATTTCACCAGCTGAACAATCGATCCCTCTCGTCGGATCTTTGAAAGTGGCCAATTGTTTGATGTGTATCTTATAGATTGTTAATCTTGAGGCAAGGGGATTTTTTTTTTTAGTTTAAGTTTGATTCATTTCCCAAATAATGGATATGGGTAGCAAGAATGATACTCAAGGACAAAAGAGGAACAAGGATGCTACTAATTTTCAGTCACCAAACATATCGTTGGACTGGCAATTAAGTGGAAGCAACTTGACAAATGCATCAATGGGGATGATCCCTAATAGCAATCCTTTAGTAGATTCAGTTTTTCCCACTATTTGGGATCGGCCTCCCAATTCGTCACACTTAGGTTTCTATGGTAATAATAATGCTAATGCTCAAATCAGTCCTTGCATTATGAATCAGCACGAGACTGCAGCAATTGGCTCGGTCCCTACGAGAGGTAGTATGAGTTGGAATCCACTGAATTCGATGCTGAAAGGGGCTATGTTTGTACCACCTATTCCTGGAATGATTCCTCAAAGCTTAGCTCAGCTTCCAGCTGATTTGGGTTTCATTGAGAGAGCTGCAAGGTTTTCGTGCTTCAGTGGAGGAAACTTCAATGATATGATGAACCGGCCTTTAAGCGTCCCTGAGTCTACTAAGCCTTGTTATAGGGGACCGGCACCAACGTGGAGAACCGAAGAGGTTCTTGCAAGCAGCGGGTTAAACTCACCCTCTGCTGTGGACCCTTGGAAGCAGAACATACGAAGTGGTGTTGATGGTTCCAAAGATGTTTCTTTACCTCATGAGAACAAAACTCATGAGCAAAGCCCTCTCAAGATTGAGAAGAAGAATGAAATATTTGCGAGGTCTCGGGATGAAGGAAAAGAATCAGTTGGATTGTCTGGAAATGAGTCTGATGAAGCTGAATGTAGCGGCCGTCAAGAGGAAATGGGAAGTGCCGGACTGGAATCTTCCCCGAAGAGCCTTGGCTCAAGGAAAAGGAAAAAATATAGTCAGGGTACCGAGCATGATCGAATGAAGCGAGTACAACAGCTGCCAGCTGAACCTGATAAAGAACTAATTGAAACTCAGAAAGGAGATGGACGCTTACATTCACCTTCTAGCAAGCATGGCGGAAAAAACAGTAAACAGAGGTCTCAGTCTTCAGATCCACCTAAAGAAGATTACATACATGTTCGAGCTCGAAGAGGCCAAGCGACGAACAGCCATAGTCTTGCAGAAAGAGTAAGGCGAGAGAAAATAAGTGAAAGGATGAAATTTCTGCAGGATCTTGTACCTGGTTGTGACAAGGTCACTGGTAAAGCTGTAATGCTGGACGAAATCATTAATTATGTTCAATCTTTGCAAAGACAGGTTGAGTTCCTCTCGATGAAGCTTTCAACAGTAAACCCAAGGCTAGATTTTAATCTTGATGGGGTCCTTACAAAAGATTCACAAGCAGGTCCTTCGTCCGCACTTGCGTTTTCACCTGATAATATGACCATGACTTATGCTTCTTTGCATGGATGGCAATCTGGTCTGCTTCAATCAGGTCTTCCTGGTGATGGAAATTACATTGATGCGTTCCGTAGATCCAACACCCAACTCTCCTCTATGAGTGGTGGCTATAGAGATCCTTCATCTCAGGTACCTAGTGTATGGGATGATCAGCTGCATAATGTTGTGGATATGGGATTCACTTCAACTGCACCCCTCGATTGCCAGGATTTAAGTTCTTTGCCACCCGACCAAATGAAAACAGAACCTTGAAATGTTTCAAATCGTCAACCGGATACACTTTCTGTTTCTATGGGGAGTAAGTTGCATAGATCATCGTAGCACTGAGTGAGTTCACATGTTTGGGGAGTTATCACGCGGTGATATCCCCATCTTTCAAAAAGTGCTCCCTCCCCACAGTCGAAGGAGTTCTGAGTTCAGTTGTACAGCAAGTCCACAAAATGTTCCCTTTTTTATGCTCATTCTATATAGGTTACAAAAAGTGAAGATTTATACAACATGTTTGTGAGATTATTCCATCAACACATGCAAATGAGGGTTCAAGAATTTATGCGTTCCGGATACTATATGCAAGCCTCTCTACCTTCCGTGTACACTCTACACTCTCCAGACCGTACTTTGTGAAATTACATTGAATATATTGTTGTTGTTGGTACTATTTACAAGCTTAATGGAGAATAGCCATTCATGTTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g010130.2.1SL2.50ch01:4870307..4872892538+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g010130.2SL2.50ch01:4870120..48733343,215+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g010130.2.1.1SL2.50ch01:4870120..48711681,049+n/a
exonexon:Solyc01g010130.2.1.2SL2.50ch01:4871250..4871477228+n/a
exonexon:Solyc01g010130.2.1.3SL2.50ch01:4871555..487162066+n/a
exonexon:Solyc01g010130.2.1.4SL2.50ch01:4871700..487176869+n/a
exonexon:Solyc01g010130.2.1.5SL2.50ch01:4872005..487207672+n/a
exonexon:Solyc01g010130.2.1.6SL2.50ch01:4872180..4872374195+n/a
exonexon:Solyc01g010130.2.1.7SL2.50ch01:4872681..487276585+n/a
exonexon:Solyc01g010130.2.1.8SL2.50ch01:4872855..4873334480+n/a
intronintron:Solyc01g010130.2.1.1SL2.50ch01:4871169..4871249n/a+n/a
intronintron:Solyc01g010130.2.1.2SL2.50ch01:4871478..4871554n/a+n/a
intronintron:Solyc01g010130.2.1.3SL2.50ch01:4871621..4871699n/a+n/a
intronintron:Solyc01g010130.2.1.4SL2.50ch01:4871769..4872004n/a+n/a
intronintron:Solyc01g010130.2.1.5SL2.50ch01:4872077..4872179n/a+n/a
intronintron:Solyc01g010130.2.1.6SL2.50ch01:4872375..4872680n/a+n/a
intronintron:Solyc01g010130.2.1.7SL2.50ch01:4872766..4872854n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17671807%2Fdetails feature 17671807
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