Solanum lycopersicum mRNA Solyc01g056720.2.1
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Name | Type |
Length
1,154
|
Organism |
Description
Aquaporin SIP12 (AHRD V1 ***- D8FSL5_GOSHI); contains Interpro domain(s) IPR000425 Major intrinsic protein
|
Location(s)
SL2.50ch01:56282037..56292081
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0016020
- Length
- 10045
- Sifter term
- GO:0015250
![]() | spliced mRNA sequence, including UTRs |
>Solyc01g056720.2.1 Aquaporin SIP12 (AHRD V1 ***- D8FSL5_GOSHI); contains Interpro domain(s) IPR000425 Major intrinsic protein
CGAAAATGGGAAAAAGAAAAAGAGATAAAAGATTGACCTGTTTCGTAGCAATTCCGATAAAGATGCTGACAACAGCCACAATAATGAGTCCCCGACGACCGACGTCAACATAAGTAAGGAAACCGAAACCGAAAGCTTAGCCACACAGACCCTTCCTCAGTAACTCCTTCGTCTCCAAACAAACAAGGAAAAGACGAAATGGGGGTAAGCAGGAGAAGCCTTGTGATTTCAGATTTCATCATGTCTTTCATGTGGGTTTGGTCAAGTGTGCTTATTAAGATGTTTGTTCATAAAATCTTGGGTTATGGGGCTCATGATCTCAAAGGTGGGGCATACAACCCTCTCACTATATTATCTGGTGCCATCTCCGGGGATCTCACCAATTTCATCTTCACTGTTGCTGCTAGAATTCCTTCTCAGGTCTTTGGTTCAATTACTGGGGTTAGATTCATCATTGCGGCATTTCCAAACATAGGACGTGGACCTGTTTTGAGCATTGACATTCATCGAGGTGCATTGACAGAAGGAATTTTGACATTTGCAATTGTTAGCATTTCACTTGGACTTTCCAGAAGAAGTCGAGCGAGTACTTTCATGAAGACATGGATATCCAGTCTATCCAAACTGACTCTTCACATTCTTGGTTCTGATCTAACAGGGGGATGCATGAATCCAGCTTCTGTGATGGGGTGGGCTTATGCGCGGGGTGATCATATTACTAAGGAGCATATACATGTTTATTGGCTTGCTCCAATTCAAGCAACTTTGTTGGCTGTTTGGACTTTCAATTTGCTAGTTTCCCCATCAAAGGACAAAGAAGCAAAGAAGACGGAGAAAAAGTCAGAATGATTCATCATTCTTTTCTGGTTCAGAAACTACATGTATCAACTTACTTCTCTTTCTTTTCAAAAACTTAATTTGAAAAGGGTTCAGTTAAGGGATGTATTATTTTGCCTCAATATAATGTTAACCTCCCCTGTGTTTGAATTATTGATGAAAATCCCCAATCTATGTTGGATTTCTTATGAAACAATTAAACAGCAAAAAAAGAAAATTGTAGAGAATGTTGTAAATTTATCATATTAGTGTGGATGCCAGTAACTTCAAGGTGTAATTCCACCATTATGTGTAGTAATACCAACACTTCCGTACTT
CGAAAATGGGAAAAAGAAAAAGAGATAAAAGATTGACCTGTTTCGTAGCAATTCCGATAAAGATGCTGACAACAGCCACAATAATGAGTCCCCGACGACCGACGTCAACATAAGTAAGGAAACCGAAACCGAAAGCTTAGCCACACAGACCCTTCCTCAGTAACTCCTTCGTCTCCAAACAAACAAGGAAAAGACGAAATGGGGGTAAGCAGGAGAAGCCTTGTGATTTCAGATTTCATCATGTCTTTCATGTGGGTTTGGTCAAGTGTGCTTATTAAGATGTTTGTTCATAAAATCTTGGGTTATGGGGCTCATGATCTCAAAGGTGGGGCATACAACCCTCTCACTATATTATCTGGTGCCATCTCCGGGGATCTCACCAATTTCATCTTCACTGTTGCTGCTAGAATTCCTTCTCAGGTCTTTGGTTCAATTACTGGGGTTAGATTCATCATTGCGGCATTTCCAAACATAGGACGTGGACCTGTTTTGAGCATTGACATTCATCGAGGTGCATTGACAGAAGGAATTTTGACATTTGCAATTGTTAGCATTTCACTTGGACTTTCCAGAAGAAGTCGAGCGAGTACTTTCATGAAGACATGGATATCCAGTCTATCCAAACTGACTCTTCACATTCTTGGTTCTGATCTAACAGGGGGATGCATGAATCCAGCTTCTGTGATGGGGTGGGCTTATGCGCGGGGTGATCATATTACTAAGGAGCATATACATGTTTATTGGCTTGCTCCAATTCAAGCAACTTTGTTGGCTGTTTGGACTTTCAATTTGCTAGTTTCCCCATCAAAGGACAAAGAAGCAAAGAAGACGGAGAAAAAGTCAGAATGATTCATCATTCTTTTCTGGTTCAGAAACTACATGTATCAACTTACTTCTCTTTCTTTTCAAAAACTTAATTTGAAAAGGGTTCAGTTAAGGGATGTATTATTTTGCCTCAATATAATGTTAACCTCCCCTGTGTTTGAATTATTGATGAAAATCCCCAATCTATGTTGGATTTCTTATGAAACAATTAAACAGCAAAAAAAGAAAATTGTAGAGAATGTTGTAAATTTATCATATTAGTGTGGATGCCAGTAACTTCAAGGTGTAATTCCACCATTATGTGTAGTAATACCAACACTTCCGTACTT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc01g056720.2.1 | SL2.50ch01:56282341..56291883 | 217 | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc01g056720.2 | SL2.50ch01:56282037..56292081 | 10,045 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc01g056720.2.1.1 | SL2.50ch01:56291757..56292081 | 325 | - | 2 |
exon | exon:Solyc01g056720.2.1.2 | SL2.50ch01:56291590..56291684 | 95 | - | n/a |
exon | exon:Solyc01g056720.2.1.3 | SL2.50ch01:56282597..56282857 | 261 | - | n/a |
exon | exon:Solyc01g056720.2.1.4 | SL2.50ch01:56282037..56282509 | 473 | - | n/a |
intron | intron:Solyc01g056720.2.1.2 | SL2.50ch01:56291685..56291756 | n/a | - | n/a |
intron | intron:Solyc01g056720.2.1.3 | SL2.50ch01:56282858..56291589 | n/a | - | n/a |
intron | intron:Solyc01g056720.2.1.4 | SL2.50ch01:56282510..56282596 | n/a | - | n/a |
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