Solanum lycopersicum mRNA Solyc01g079330.2.1

mRNA details  
Name
Solyc01g079330.2.1
Type
mRNA
Length
2,830
Organism
Solanum lycopersicum
Description
ATP dependent RNA helicase (AHRD V1 *-*- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch01:78398525..78407849
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
9325
Nb exon
6
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g079330.2.1 ATP dependent RNA helicase (AHRD V1 *-*- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

GAAAGGAAAAAACCAAAATAAAATAGCCCGTGGGCCGGCCTTAGTTCAGTCGCCGTTCCCCGCTGTTCATATTAGCTTCCGTTAAGCGGCAAAAAAAATAGGCGTTTTTCAGAAACAAACCGATGATAAGCAAGGTGGTTTAGATTTTAGAATTTGGATAGCTCTCTTTTCTCTGGCCGGAATTTGTTAGATAATACCATATCTGTATATTCAGTTTTTTTTTAGGGTTCAGTAAACTAGGGTTTGAACTTTTGAATCAAACGGATATGTCGAAGAGAAAATTTGGATTCGAAGGATTTGGCATTAATCGGCAAACAACGTACAACTTCGAGCGAAATCAAGCTCCTCAGCGACTGTATGTTCCGCCATCCTCACGTTCTGGAGGTAGCCATGACAATTACGAAGATACCGACTTAGATAACATTGAGTACGATGAACACGACGCTGTCGGAGGGAACAACAATGATGGAGGCGGAGGAGGTGGTGAAGATGATGAAATTGATCCACTTGATGCGTTTATGGAAGGGATTCATCAAGAAATGAAGGCTGCACCGCCTCCTAAGCCAAAAGAGAAGTTGGATAAGTATAAAGATGATGTAGATGATGATCCGATGGAGAGTTTTCTGAGAGCGAAGAAGGATGTAGGTTTACAATTGGCGGCTGATGCTCTTCACGCTGGTTATAATTCCGACGAGGAGGTGTATGCAGCAGCAAAGGCTGTTGATGCAGGATTAGTTGAGTATGACTCCGACGATAATCCTATTGTTGTTGATAAAAAGAAGATTGAGCCGATTACTGCTCTGGATCATAGTGAGATTGACTATGAGCCTTTCAACAAGGATTTTTACGAGGAAAAGCCTTCTATTTCAGGTATGAGCGATCAGGAAGTTAATGAATATAGGACAGGCTTGGCCATTCGTGTATCAGGCTTTGATGTACCAAGGCCAATTAAGACATTTGAAGACACTGGTTTTTCTGCTGAGTTGATGAAAGCTATCAGTAAACAGGGATATGAAAGGCCTACGCCAATACAGTGTCAAGCATTACCAATTGTGCTCTCTGGGAGAGATATTATTGGTATTGCTAAAACTGGGTCCGGTAAGACTGCTGCCTTTGTGCTTCCTATGATTGTCCACATCATGGATCAGCCTGAACTTCAGAAAGAAGAAGGCCCCATTGGAGTTATTTGTGCACCCACTAGGGAATTAGCACATCAAATATTTGTGGAGGCAAAGAAATTCTCGAAATCGCATGGTATCCGTGTGTCTGCAGTTTATGGAGGAATGTCTAAATTGGATCAATACAAAGAACTAAAGGCTGGGTGTGAGATTGTTGTTGCTACTCCAGGGAGGTTGATAGATATGATCAGAAAGAAGGCATTTACAATGTTGAGAGCAACTTATCTAGTGCTTGATGAGGCAGATCGGATGTTTGACCTTGGTTTTGAGCCTCAAATAAGGTCCATTGTTGGTCAAATTAGACCTGATCGCCAAACATTGCTCTTTTCAGCAACTATGCCCCGCAAAGTTGAGAAGCTTGCCAGAGAAATATTGACGGATCCTGTAAGGGTTACTGTGGGTGAGATTGGCACGGCTAATGAGGATATTACACAAATAGTTGAAGTGATTCCTTCGGATGCTGAAAAATTGCCTTGGCTTCTGGAGAAGCTCCCTGGACTGATTGACAATGGTGATGTTCTTGTCTTTGCTTCGAAAAAGGCAACAGTGGATGAGATTGAATCTCAATTGGCTCAGAAGGGATTTAGAGTTGCAGCTCTCCATGGTGACAAGGATCAAGTTTCTCGTACGGAGACGCTGCAAAAATTTAAATCTGGCATATATCATGTTCTCATTGCAACTGATGTTGCTGCTCGTGGTCTTGACATCAAATCACTTAAGTCAGTGGTGAACTATGATATAGCTAAAGATATGGACATGCATGTTCACAGAATTGGTAGAACAGGTCGTGCTGGTGACAAGGATGGAACGGCCTTCACTCTTATTACTCATAAGGAAGCACGTTTTGCTGGTGAACTGGCGAACAGTTTGGTTGCTGCTGGTCAAACTGTGTCTGTGGAACTAATGGACCTTGCTATGAAGGACGGAAGGTTTCGGTCCAAAAGGGATGCAAGGAAAGGAGGTGGAAAAAGGGCCAAAGGAAGGGGAGGAGGAAACAACAAAGGTGTACGAGGTGTGGATTTTGGTCTAGGGATTGGATACAATCCTGAATCAAATAACCCTCTCCAGAGCGCTGCTCCAAGCCGTTCTGCAGCTGTTAATTCCCTGAGGACAGGCATGATGTCACAATTTAAAAGTAGCTTTGTTGCTGCATCATCAAATTCTCAAAATCAAGGGATGAATAACACAGCTGGCGCGTTTCCCAACAAGAAAATGGTCTTGCAAGGCTTTGTCTCTGGTGGGACTATAGGTGGAAATAGTAATACTCCCCATATTAGTTCCACATTTACTGCTGCAACACCTGGGGGATATACTTCTAGTCAGCCAGCTAGAGATGGAGCTAACCAGAAAAGTTCAGAGAGTTCAAAGGAGAGGTCCAGAGAGAGACGGAGGCCTTCTGGTTGGGATCGTTGATTTGTTATTTAGTACTGTGGGATATGCATGGTTTACGTGTCACTCCTCATCATGGTCTAAGTTGGTGACTTTTCTTTCAAACTCACCATTTGCATCAAGGAAATGAAAGGAAGATAAATTGTTATATCACATAACAAGTAGCGAGTATGCAGAGTCCAATCAGACTGGTGTCCATTGCAGAGATAGCTTGGGAGGAAGTTATGGTGCTTCTGAAATGGTTCATGTAAAATGATCTTTAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g079330.2.1SL2.50ch01:78398944..78407583775-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g079330.2SL2.50ch01:78398525..784078499,325-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g079330.2.1.1SL2.50ch01:78406980..78407849870-2
exonexon:Solyc01g079330.2.1.2SL2.50ch01:78401803..784030311,229-n/a
exonexon:Solyc01g079330.2.1.3SL2.50ch01:78399720..7839975940-2
exonexon:Solyc01g079330.2.1.4SL2.50ch01:78399101..78399500400-1
exonexon:Solyc01g079330.2.1.5SL2.50ch01:78398933..7839899664-n/a
exonexon:Solyc01g079330.2.1.6SL2.50ch01:78398525..78398751227-n/a
intronintron:Solyc01g079330.2.1.2SL2.50ch01:78403032..78406979n/a-n/a
intronintron:Solyc01g079330.2.1.3SL2.50ch01:78399760..78401802n/a-n/a
intronintron:Solyc01g079330.2.1.4SL2.50ch01:78399501..78399719n/a-n/a
intronintron:Solyc01g079330.2.1.5SL2.50ch01:78398997..78399100n/a-n/a
intronintron:Solyc01g079330.2.1.6SL2.50ch01:78398752..78398932n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17683020%2Fdetails feature 17683020
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