Solanum lycopersicum mRNA Solyc01g080670.2.1

mRNA details  
Name
Solyc01g080670.2.1
Type
mRNA
Length
2,879
Organism
Solanum lycopersicum
Description
Squamosa promoter binding protein-like 1 (AHRD V1 *-*- Q56YT3_ARATH); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box
Location(s)
SL2.50ch01:79915260..79923885
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
8626
Nb exon
10
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g080670.2.1 Squamosa promoter binding protein-like 1 (AHRD V1 *-*- Q56YT3_ARATH); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box

CATTTTCTTGTCACCTAACGCCACCGCCTTCCGCCTCCCTCCGCCGCTGACTCCGACGGCTGACCTTCTCTGTATCTCTTTCCGTTAACCCCACCCACCCACCCCCACCAAACAATCTACTTTCTAGGCCAACCACCCTCATCTACTAACTAACTTCCTGTTTTCTAGGAATCCTGGCTGAAGCTTCGTCAGAAAATGCATAATCAACCTTTTTCATCGTCACAAACGGGAGTTCCGACCGAATTAAGGAATACCCAGATGATTTCCTCTTTGCTTTCCGGGGATGACCCCGCAGCTTCATCCAATTTTGACTGGTCGGATTTACTCGACTTCGACCTACACGAACAATTGAACATCTCATTCGATGACCCACTTCACCAAGAGCAGCAGCCGGAGACAGAATTCGTGGCGCCGGTGATACCTTCTTCGGAGGATTCACCGCATAGCCAAGATACGGATGCGGGTCGGATCAGGAAGAGGGACCCGAGGATGGCGTGCTCGAATTTTCTGGCGGGTCGGATCCCGTGTGCTTGCCCCGAGTTAGATGAGAAGATGGAGGAAGAGGAGATGGCAGGGATTGGGCCAGGAAAGAAACGGGCTAGGACTGTACGGGCTTCTGCCGGAGCTGGGGCGAGGTGTCAAGTACCCGATTGTGAGGCGGATATCAGTGAGCTGAAAGGGTATCATAAGAGACACAGGGTGTGCTTACGTTGTGCTAATGCAACTTCTGTGGTTCTCGATGGGCACAGTAAGAGATATTGTCAGCAGTGTGGCAAGTTTCATATTTTGTCAGACTTTGATGAAGGTAAGCGTAGTTGTAGAAGAAAATTAGAGCGACACAACAACAGGCGTAGGAGAAAAGCCACTGATACGTCCAAAACGTCTGCTGAAAAGGAATCTCAGCAGCTCACAACGGCTGATGATGTTAGTGGTGATGACGACATCGTCAAAGATAACACATGCATGGGCAGCCAGTTAGGAGAAAAGGAAATCCTATTAGAATCTGAAGGACATGTGCCGATATGCTCTACTCAAGGCATCCAGAATAATCACAGTGATAGTTTCACAGCTTCTGGTGAAACACAGGTTGATGCAGAAAAGGAGAACTACAAAAATTCCCATTCTCCATCATATTATGACAACAAGAGTGCCCTTTCTTCAGTGTGTCCCACTGGTCGGATCTCATTCAAGCTTTATGATTGGAACCCCGCAGAGTTCCCTCGAAGACTCCGGCACCAAATCTTCCAGTGGTTGGCCAGTATGCCTGTCGAATTGGAGGGCTATATTCGTCCAGGTTGTACAATCTTGACAGTTTTTGTTGCAATGCCGACATTCAAGTGGGGTAAGTTACTAGAAGACCCAGCTGCACACTTATATGAGTTAATTGCATCACCTGGAAACATGCTTCGTGGAAGAGGAAGCTTTCTTATTTATCTCAACAACATGGTATTTCGTGTTACCAAAGGTGAAAATTCAGTAGTTAAAGTCAAGCTGAAGGGACCAGCACCAAAGCTTATGTCTATTTATCCTACGTGCTTTGAGGCTGGCAAGCCTATGGAATTTTTTGCCTGTGGAAGCAATCTAATGCAGCCCAGATTCCGGTTTCTTGTGTCATTTGGGGGAAGGTATTTGGGGAATGATATCAATGTCGTACCATCAGATTGTAAATATGAAGGTGATTCTAGTAGCACGGAGCATCAATTATTAAAGATACATGTCCCTAGAACTGAAGCAGATCTTTTTGGCCCCGCTTTTGTTGAGGTTGAGAATGAATCTGGCTTATCTAACTTCATCCCCATCCTCATTGCGGAAAAGGATATTTGTGCAGAAATGAAGGAAATACAACGGAAGTTCTGTTCTGGAGGGTCAGAATGCACTGCTGTTTGTTCTCCCTGTGAAGCTTCCACGTCTAGAAAGTCAGAATTTTCAGAATTTATGTTGGATGTGGCATGGTTACTAAGGGAGCCTTCATCAGAAAATGTTCAGATTCTGGCGTCTGTACAGATGCAGAGATTTAATTATTTGTTGAACATTTTAATGGAAAGTCAGTCAACTATTATTTTGGAAAGAGTATTGTCTTATTTTGAAAATATAGTGAAGAGAAACATGTTAGCTGGCATCACTGATGCTGACATGACACTTTTTCAGAAGAATATTCTCGAGAAAAATATTCTGCTCAAGGAAAGATTGCATCTAAAGGAATATTTTGCGGGAGATTCAGGACAAATTATGCAGGAGCTTCCTAATTTGCAGGACACAGCGGTACCACATAAGCACAACATAGAGTTTGGTCCTACTTATTGGGAGCTAACTTCTAGAGTCCCACTTTTGGATGCAGAATTGCCATTGAGAGTGAAGGAACAACAATCAGGGAAGTCCTGTGGCTTCTTGGTTAGAAAGACACTATTGACGTCTCGTACTCTTGTTTTTGTAATCTCTGGTTTTGCTTTGTGTCTTGGTCTATGTGCAACATTCCTGCATCCTAGAAAAGTTGGTGACATTGCTATGACAATCCGGAGGTGTTTGTTTGACAAAACTTAAAATTGCATGTAACTTTTACCAAAATGACGGTCTGCAGTCACAGAATATAGGTGTGATCTCCATTGCTCGGGGTCCCCCTTTGTGGCATTCTTGATGTACTATATTACCTGTGCTATGTAAACACAAAACTGTATCAGCTATGTAGCTTCAACTAGTTGTGTAGTTTCTTTGTACAATTTGTTGGATAGTCACCCTAAAAGCCTTTTATTGCTGACATCAGTTGTCCCCAAAGAGCAGATACACTGATACTATTTGTGCTCAACTTCTTTAAGCTTTGGACTCTTGAAACATTTTGATGTGAATATGCCTGTTATTTCAATGCTAAAGAGTGTTGCTCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g080670.2.1SL2.50ch01:79915517..79923547761+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g080670.2SL2.50ch01:79915260..799238858,626+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g080670.2.1.1SL2.50ch01:79915260..79916035776+n/a
exonexon:Solyc01g080670.2.1.10SL2.50ch01:79923245..79923885641+n/a
exonexon:Solyc01g080670.2.1.2SL2.50ch01:79916740..79916915176+n/a
exonexon:Solyc01g080670.2.1.3SL2.50ch01:79917176..79917387212+1
exonexon:Solyc01g080670.2.1.4SL2.50ch01:79917483..7991755775+2
exonexon:Solyc01g080670.2.1.5SL2.50ch01:79917655..79917762108+n/a
exonexon:Solyc01g080670.2.1.6SL2.50ch01:79918144..79918261118+n/a
exonexon:Solyc01g080670.2.1.7SL2.50ch01:79918448..79918583136+n/a
exonexon:Solyc01g080670.2.1.8SL2.50ch01:79921078..79921237160+2
exonexon:Solyc01g080670.2.1.9SL2.50ch01:79921954..79922430477+1
intronintron:Solyc01g080670.2.1.1SL2.50ch01:79916036..79916739n/a+n/a
intronintron:Solyc01g080670.2.1.2SL2.50ch01:79916916..79917175n/a+n/a
intronintron:Solyc01g080670.2.1.3SL2.50ch01:79917388..79917482n/a+n/a
intronintron:Solyc01g080670.2.1.4SL2.50ch01:79917558..79917654n/a+n/a
intronintron:Solyc01g080670.2.1.5SL2.50ch01:79917763..79918143n/a+n/a
intronintron:Solyc01g080670.2.1.6SL2.50ch01:79918262..79918447n/a+n/a
intronintron:Solyc01g080670.2.1.7SL2.50ch01:79918584..79921077n/a+n/a
intronintron:Solyc01g080670.2.1.8SL2.50ch01:79921238..79921953n/a+n/a
intronintron:Solyc01g080670.2.1.9SL2.50ch01:79922431..79923244n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17684670%2Fdetails feature 17684670
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