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Solanum lycopersicum mRNA Solyc01g086870.2.1

mRNA details  
Name
Solyc01g086870.2.1
Type
mRNA
Length
1,634
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch01:81797188..81799514
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2327
Nb exon
6
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g086870.2.1 BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

AATTGCTTGCTAGCTCATACGCCATTTTTCCTTCTTCTTCTTCTTCGATAAAATTCGAAAAAATTGAAGCTATAATTCCAAAAAAGATATTATTAGAATCTTGATTATGTTTAGCTCAGAGCCAATATCTAGAGAAATGGATAAGTTGAATAGTTTCTTTTTTTCCGGTGGTGGTGGGGGTTCTTCAAGCTTCAAAAATGGTGAAGGAATGGAGTCTGAGTTCTTTAGGAGCAAAGAAATGATGGGTTCTGATTTTTTTCAGCAACAGTCACAGTTTCAGCAGAGTAATTCCGGTGGGTTAACGAGGTACAGGTCAGCTCCAAGTTCGTTTTTCGCCGGAATTCTTGACGGAGACGGGAATAATTCCGGTGAAAATTTCATTACCGGTGATGGGTCTTCGAGTTCTGATTCGGATTCCATGTTCACCGCCTTATTGAACAATAACGACACCACCAACAACAATGGTACTCGAGATATGAATGATCAAAACCAGAAGAATCAGCTTCAGTTTGGTACTTCTTTGAAACAGGAGATTGGTGAGGAGATTGAATTTGGGAATGAAAATGGTGTACAAAATAGATATGAGAACGGTGGTGTTTCTTATAGTGTAGGGGTGCAAATGCAAACTAGAGCAAATTTGAGTAATGGAAATGGTGACTCTGATCTCATCAGACAAAACAGTTCACCTGCTGGATTCTTCAATGGATTTATGAGAGAAGTTGGGAATTTCGGAGCAAGTGTTGGGACTAACAGGGAAGCAAGTACATCAACTAATGGTTTCAACAATCATATAAGTTACTCAACTAATCAATCATCTACCTCAAACTTCATGCCTAGCATTGCTGAGAATGAATCTTGGAACGACGCGTCGTTTAATTCCTTGAAGAGAAATAGAGATGGTGATCTGAAAATGTTCTCTACTAATTTCAATGGAATGACTAATCAGAATGACGAATCAAGAAACTACACTTCTTCTGGTTTATCTCATCATTtaagcttgcCTAAGACATCTTCTGAGATGGCTGCCATAGAGAAATACCTACAGTTCCAACAAGATTCAGTGCCTTGCAAAATACGTGCTAAACGAGGCTGTGCTACGCACCCACGAAGTATTGCAGAAAGGATGAGACGTACTCGGATTAGTGAAAGAATGAAAAAACTGCAAGATCTTTTCCCAAATATGGACAAGCAAACAAACACAGCTGATATGTTAGATTTGGCAGTTGATTACATTAAAGACCTTCAGAAACAAGTCCAGACACTGACCGATAAAAAGGCGAAATGCTCGTGTACAAGTAAGCAGCTGCAATATTCAAATGGAACAACATGAAATAGTCTTGTGTACAGATAGTAATAGGTGAAGTTAGATGGAAAAGGAGAGTAAATAAACTCTCTTTCTACCCTAATATGCTGGAAATATGGTTCTACTTTGTTTTTATTTTGCAACAAGGCAAGTGTAGTTTTCAATGTATTATTGAGTTTGATTAGATCTAATAACAGTCTAGTGAGTACAATCTAGATGTATAGGAGCACATGATTATTGTATTATGCTGTTGTTTATTGGAATTTAACTATGTTATTAGTTGATTCAAAACTTTATAAGACAAATAATATCGATTGGAAAGAGTAATTCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g086870.2.1SL2.50ch01:81797491..81799408408-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g086870.2SL2.50ch01:81797188..817995142,327-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g086870.2.1.1SL2.50ch01:81798811..81799514704-2
exonexon:Solyc01g086870.2.1.2SL2.50ch01:81798279..81798520242-n/a
exonexon:Solyc01g086870.2.1.3SL2.50ch01:81798028..81798204177-n/a
exonexon:Solyc01g086870.2.1.4SL2.50ch01:81797836..8179790166-n/a
exonexon:Solyc01g086870.2.1.5SL2.50ch01:81797670..8179773869-n/a
exonexon:Solyc01g086870.2.1.6SL2.50ch01:81797188..81797563376-n/a
intronintron:Solyc01g086870.2.1.2SL2.50ch01:81798521..81798810n/a-n/a
intronintron:Solyc01g086870.2.1.3SL2.50ch01:81798205..81798278n/a-n/a
intronintron:Solyc01g086870.2.1.4SL2.50ch01:81797902..81798027n/a-n/a
intronintron:Solyc01g086870.2.1.5SL2.50ch01:81797739..81797835n/a-n/a
intronintron:Solyc01g086870.2.1.6SL2.50ch01:81797564..81797669n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17686152%2Fdetails feature 17686152
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