Solanum lycopersicum mRNA Solyc01g086980.2.1

mRNA details  
Name
Solyc01g086980.2.1
Type
mRNA
Length
2,576
Organism
Solanum lycopersicum
Description
Polyadenylate-binding protein (AHRD V1 *-*- C9S619_VERA1); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait
Location(s)
SL2.50ch01:81896171..81907068
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0003676
  • GO:0000166
Length
10898
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g086980.2.1 Polyadenylate-binding protein (AHRD V1 *-*- C9S619_VERA1); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait

TAGAAGTCATTTTAACACTACATTACGAGTTCCTTCCCCAAAAGGTTTTGGGGTTTCTCGTTTTTCCCCTTTTCGTCTCCGCCATGAATTGATTTCCCGGAAAAAATCCCAGCTAATCAGTGGATAGCATTTTCCTCGATTCATATCATTGGATCTTCTCAATCTACAATCACTTCTCAGTATAACTTTGAAGTTTTTAGGGTTTTTGATGCGAATTCTTATTTGAGAAATCAAAGAGAATTTTTGGAATAATCGGTACGTTTTTGTTTGTTGAATCGTGTTAGAGAATCATCATCTAGGAAATCGAATTAGGAATTTTTGGTTGAATAATGGGGAGTGGAGATAGAGAAGATGATCGGACATTTAGGGTTAATTTCACCGCTGAAGGATTTGCGAAGCTCCGGGAACGAGTTAATGAGAAACTCAAGGAGTTCATGGGTGACTACACGGATGATACTCTTGTGGAATATGTCATAGTCTTGTTAAAAAATGGTAGGCGTAAAGAAGAAGCAAGAAATGAATTGAATGTTTTTCTTGGAGAAGACAGTGTCTCCTTTGTTGATTGGCTATGGGATCACCTGGGATCAAATATAGATCTGTATGTGCAACGAAAGGATTATGATACAGGAGGGACAAAAACGAAACCTGCTATTGCAGAGCAGCCTGCAAAGAATGATATGCACCACCAGGACACTGTTGCTGATAAAGAGAAATTAAATAAATCTAAAAGCCGTACTCGAAGGGAGTGGAAAGGGCTTGTTAGCGATGGACACCCTTCTCTACGTAGTTCTTTGGCCGAAAACATTCCCGAGGAGGAAGCTCATCGAAAAGTTGGTCATGCAAAGCGATCCCTATCCCCTCAGCCAGAACATGTGAGAAAAAGAAGCAGACCTGAAGAAAAGCCAAAAAAGAGGGAAAGCAGTAGTCAAACAACAGTTGCTGCTACTCGGAGGTTGCTGCAATTTGCAGTAAGAGATGCCGTGGCTACTAATAGGACATCCAGTTCCACTCTAGCTCCCTCACCTTCACTAAAGCGTCTTCGCTCTGTGGTCTCTACATCTGTGGAGGACTCATCCCTTCCAGAACGCCCACAGAGGATACGGTCGGTTGCAAGAGCACCAACTGCCTTGGCCACTGCTATTAGAGCTGTTGCAGAAGCTGCAAAAGATGTAACAAAAGTTAGATCGTCAGCTGTTGCTGAAGATGTACAAGATCAATCTTTTGCTGATGCAAGCGAGGCGTACTCAACTTACCTTCACAGAAGTGATTATAGTGGAAAGCATATTGGGAAATCTATGTTGCATGATGATGCTGTGGTTGTTTATGATTCAGCATCGGATGATGAGGCTAATCGTGGTAGCAGTGCTGTGAATAGAAGGGCTTTTGATGCCTCTAGATCTGGTGCACCTGTTAAAAACATAGGTGAGAATCTGCTTATAGTCGAGCATGGCATTGCTTACAATGTGGATGATATTTTGGACAAGTCACAGAAGGACCAGGCTCAACCTACATTTGCTCCTGGTGCTCCTCACCAGCCAATGAATATCCCGTTAAGTGTGAATACCTGGAAATCACCTCAGTATCAGGATGCAAGACAGTCATTTGAGATAGAGAATCGGAGATCTGCCCAAAGCAGTGAAGGCTTGGCCGAGAAATCTGATATAATGTTGACAAAAGAGAGCACTAATCCTATTGCAGTTACTAACGGAATTGTCAAACCATATGTGGAGACGCAGAAGGAGTCTCAGAAGACAGGTTTTCTTAATCACGGTTTGTATTCTACTGGTGCACCTACAGAAGATGCTGATTCACGAACCATCTTTGTTAACAATGTTCATTTTGCTGCTACAAAGGATAGCCTTTCTCGGCACTTTAATAAATTTGGAGAAGTGCTTAAAGTGGTAATCCTGACTGATGCTGGAACTGGGCAACCCAAAGGGTCAGCTTATGTAGAGTTCATGAGAAAAGGATCTGCAGAGAATGCTTTATCTCTTGATGGAACATCATTCATGTCACGCATTCTGAAGGTTGTGAGGAAAAGCTCTGCTACTCCTGAAGCAGCGTCTGGCACTGTATGGCCTCGTGTTGCGAGAGGTGGTCCTTTTGCCGTTTCTAGGTTTGGTCGGGTCCCTTTTCCTAGAGGCTCTCCCACTTTGTACAGGTCCCGGCTCCCAATCAGGCCTGGTGCTAGAAGTATGCAATGGAAACGAGATGCTCAGCCCACATCGACTGATAACTCTGGTTTGGCTACACCCTCGAGTAAAGCAGTTCCTTCTCCCATTCCTCGGAGTATGACATATGTACGAACAGAATCCAAGACAAATGGAAATTCTACTGCGGCTTAGTTGATTTATAGCTGTTAACTCTTTCCTGTCTCTCCGAGAATCCATCTCTTTTTAAGAAGGGTAGAAGTCCAACTTACTTGGGGCAACGTACATGATTGCTTCATCTGGTGAATCAATCTAGATGGGGAGTGAATGTAAACGTCACGTAATCATGAAAACGGAGTGTTGCCGATCTTGCTTTTATCTTATTGTTATTTCTCTAGAGTTGGGCAGAAGAGGCATTGGGTAAAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g086980.2.1SL2.50ch01:81896499..81906837672+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g086980.2SL2.50ch01:81896171..8190706810,898+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g086980.2.1.1SL2.50ch01:81896171..81896634464+n/a
exonexon:Solyc01g086980.2.1.10SL2.50ch01:81906520..81907068549+1
exonexon:Solyc01g086980.2.1.2SL2.50ch01:81898868..81898968101+n/a
exonexon:Solyc01g086980.2.1.3SL2.50ch01:81899057..81899402346+n/a
exonexon:Solyc01g086980.2.1.4SL2.50ch01:81901487..81901766280+1
exonexon:Solyc01g086980.2.1.5SL2.50ch01:81901845..81902365521+n/a
exonexon:Solyc01g086980.2.1.6SL2.50ch01:81902456..8190251358+2
exonexon:Solyc01g086980.2.1.7SL2.50ch01:81902848..8190290962+n/a
exonexon:Solyc01g086980.2.1.8SL2.50ch01:81903009..81903115107+2
exonexon:Solyc01g086980.2.1.9SL2.50ch01:81903196..8190328388+n/a
intronintron:Solyc01g086980.2.1.1SL2.50ch01:81896635..81898867n/a+n/a
intronintron:Solyc01g086980.2.1.2SL2.50ch01:81898969..81899056n/a+n/a
intronintron:Solyc01g086980.2.1.3SL2.50ch01:81899403..81901486n/a+n/a
intronintron:Solyc01g086980.2.1.4SL2.50ch01:81901767..81901844n/a+n/a
intronintron:Solyc01g086980.2.1.5SL2.50ch01:81902366..81902455n/a+n/a
intronintron:Solyc01g086980.2.1.6SL2.50ch01:81902514..81902847n/a+n/a
intronintron:Solyc01g086980.2.1.7SL2.50ch01:81902910..81903008n/a+n/a
intronintron:Solyc01g086980.2.1.8SL2.50ch01:81903116..81903195n/a+n/a
intronintron:Solyc01g086980.2.1.9SL2.50ch01:81903284..81906519n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17686249%2Fdetails feature 17686249
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