Solanum lycopersicum mRNA Solyc01g088160.2.1

mRNA details  
Name
Solyc01g088160.2.1
Type
mRNA
Length
1,910
Organism
Solanum lycopersicum
Description
Cytokinin oxidase/dehydrogenase (AHRD V1 **** C3VPM6_SOLTU); contains Interpro domain(s) IPR015345 Cytokinin dehydrogenase 1, FAD and cytokinin binding
Location(s)
SL2.50ch01:83010891..83013178
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0055114
  • GO:0050660
Length
2288
Nb exon
5
Sifter term
GO:0019139
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g088160.2.1 Cytokinin oxidase/dehydrogenase (AHRD V1 **** C3VPM6_SOLTU); contains Interpro domain(s) IPR015345 Cytokinin dehydrogenase 1, FAD and cytokinin binding

CACACACACACACAAAAAAAAAAAATCTTTTCTTCCATTTTTTTTTTTAATTGAAAAGATGACATGCCAAAGCTTAGTATTAACTCGAAAAACGAACGTTTTGTTGGTAAGAAGCTTTACAATTTTGGTACTAATATGTATAGTTATGAAGCCAGAAGTTTGTTTCTCTAGTGTCTTGTCTTCATTGAAGGCTCTTCATTTACAAGGCTATATAACTTTTGAAAACAATGAATTTGCATCCCGAGATTTCGGGAATCAAATTCACTCACATCCTTTAGCAGTAGTACACCCGAAATCTGTTACTGACATTTCAGAGATAGTAACACATGTCTGGCAAATGGGCCCGGCCTCAGAACTGACCGTGGCAGCAAGAGGCCACGGTCATTCTCTTCAAGGCCAGGCCCAAACGCGCGGAGGAGTTATAATCAATATGGAATCATTGCAGCAGGATCAAGAAATGCAAGTTTACTACAATGGAGTGAAATTCCCTTATGTTGATGTCTCAGCTGGTGAATTGTGGATAAACATATTGCATGAGACATTGAGATATGGATTAGCACCTAAATCCTGGACTGATTATCTACATCTTACTGTTGGAGGTACTCTGTCTAATGCTGGCATCAGTGGACAGGCATTTCGTCACGGCCCTCAAATCAGTAATGTCCACCAGCTGGAAGTTGTAACAGGAAAAGGAGAAGTACTAATTTGTTCACAAGAACAGAATGCTGACCTCTTTCATGCTGTTCTTGGAGGACTTGGTCAGTTTGGCATAATAACTAAAGCAAGAATCTCACTCGAAAGAGCCCCGAAAATGGTGAAATGGATAAGAGTGTTGTACTCTGATTTCTCCGCATTTGCTAGAGATCAAGAGCGTTTGATATCTGCATTGAAAACATTCGATTACATAGAAGGACTTGTGATTAAGAACAAAACAGGTTTACTGAATAACTGGAGAACATCTTTTGACCCTCAAGATCCTGTTCAAGCAAGCCACTTTGTATCAGATGGAAGAACACTCTATTGCCTTGAACTAACCAAAAATTTATACCCCGAAAATTTCGATACAGTAAATCAGGAAATTGAAGACTTATTATCCCAACTAAGTTATATTCCATCAACACTTTTCATGTCAGAAGTTCCATACATAGATTTTTTAGACAGAGTTCATGCATCAGAGCTAATACTTCGATCGAAAGGACTTTGGGATCTTCCACATCCATGGCTCAATCTTCTAGTCCCTAAAAGCAAAATACAACACTTTGCTAATGAAGTTTTTGGCAACATACTAAGTGATACAAACAATGGACCTGTTCTTGTCTATCCAATTCATAAATCAAAGGTGGATAACAGGACTTCATTTGTTTGTCCAGATGAAGATATTATCTATCTTGTAGCCTTTTTATCCCATGCAAATCCTTCATCTAGCGGAACGGACAGTTTACAACATGTTTTAACTCAGAACAAAAGAATTTTAGACTTCTGTGAGGTGTCACACCTTGGAGTGAAGCAATATTTGCCTCATTACACAACACAGGAACAATGGAGGAAACACTTTGGTCCAAAATGGGATGTTTTTGTACAGAGGAAGTCTGTTTATGACCCTTTAGCCATGCTTGCTCCTGGACAGAATATCTTCCAAAAAGCAATATCAGTTTCATAACAAATGTTGTTATTTGAAACTGATAGCAACAACTAATTCTACGTTAGGTAAATATGAAGCACGATCGAATAGAAAATGAATTCTACTTTGTTGTAGCCAATGTAAAATGTGAATAATAGCTATTAACTTCATATACTACTTCTTATGCCTTTTCTGCACATGTAAGTTTAAGAGAAGGCTAGCTAGATTCAGTAGCACTATTAGGCAAAAAGAAAGTAATGTATCAAGATGCAATAGGAGAAAAATATTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g088160.2.1SL2.50ch01:83011140..83013120534-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g088160.2SL2.50ch01:83010891..830131782,288-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g088160.2.1.1SL2.50ch01:83012493..83013178686-2
exonexon:Solyc01g088160.2.1.2SL2.50ch01:83012273..83012400128-n/a
exonexon:Solyc01g088160.2.1.3SL2.50ch01:83011914..83012174261-n/a
exonexon:Solyc01g088160.2.1.4SL2.50ch01:83011557..83011819263-1
exonexon:Solyc01g088160.2.1.5SL2.50ch01:83010891..83011462572-n/a
intronintron:Solyc01g088160.2.1.2SL2.50ch01:83012401..83012492n/a-n/a
intronintron:Solyc01g088160.2.1.3SL2.50ch01:83012175..83012272n/a-n/a
intronintron:Solyc01g088160.2.1.4SL2.50ch01:83011820..83011913n/a-n/a
intronintron:Solyc01g088160.2.1.5SL2.50ch01:83011463..83011556n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17687728%2Fdetails feature 17687728
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)