Solanum lycopersicum mRNA Solyc01g090710.2.1

mRNA details  
Name
Solyc01g090710.2.1
Type
mRNA
Length
1,348
Organism
Solanum lycopersicum
Description
Malate dehydrogenase, cytoplasmic (AHRD V1 **** MDHC_ORYSJ); contains Interpro domain(s) IPR011274 Malate dehydrogenase, NAD-dependent, cytosolic
Location(s)
SL2.50ch01:84349917..84352603
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008152
  • GO:0005975
  • GO:0055114
Length
2687
Nb exon
7
Sifter term
  • GO:0005515
  • GO:0030060
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g090710.2.1 Malate dehydrogenase, cytoplasmic (AHRD V1 **** MDHC_ORYSJ); contains Interpro domain(s) IPR011274 Malate dehydrogenase, NAD-dependent, cytosolic

TTATGTATTGTGGTAGCATTTTAACAGTGTCTAATTTCAATTATTTGTGAATTTTATTCTTAATTATTAAATTAATGGAATATTGGGGTTCAATTGAAAAGCCTATTGTTTTGTTGGGTTGTGCATATTTGTCATGGAAGATTGTTACGCATATATGGAGTTTCATGAATATAGAAAAGGATCCCATTACAGTGCTTGTTACTGGTGCTGCAGGTCAAATTGGCTATGCTCTTGTTCCTATGATCGCGAGAGGAGCCATGTTAGGCCTTGATCAACCTGTTATCATACACATGCTTGATATTGAACCAGCTGCTGAGTCCTTAAAAGGAGTGAAAATGGAATTGATTGATGCAGCTTTTCCTCTTCTCAAAGATGTTGTTGCTACCACGAACGTTGTTGAAGCTTGTAAAGGCGTCAATGTTGCTGTTATGGTTGGTGGATTTCCGCGAAAAGAAGGGATGGAAAGAAAGGACGTGATGACGAAAAATGTTTCAATTTACAAAGCACAAGCCTCTGCCTTAGAACAGCATGCTGCCCCTGATTGCAAGGTTTTGGTTGTTGCTAATCCAGCAAACACTAATGCACTTATTTTGAAAGAATTTGCCCCTTCATTTCCAGCGAAAAACATCACTTGCCTAACAAGGCTTGATCACAACAGAGCTTTAGGTCAGATTTCGGAGAAACTAAACGTTCACGTTGGTGATGTGAAGAATGTGGCAATATGGGGAAATCACTCATCAACTCAGTATCCAGATGTGAATCATGCAACTGTGAAAACCGCTGCTGGAGAAAAGCCTGTCAGAGAACTTGTTGCTAATGATCAATGGTTGAACACGGAATTCATCACCACAGTGCAACAACGAGGAGCCGCTATCATAAAAGCTCGAAAGCTATCAAGTGCATTATCTGCAGCTAGCTCAGCTTGTGATCATATACATGATTGGGTTCTCGGCACTCCAAAGGGGACATGGGTTTCAATGGGGGTTTATTCTGATGGATCTTATGGCATTCCAGCTGGTTTAATTTACTCTTTCCCTGTTACTTGTGAAAAAGGAGAATGGTCAATTGTGCAAGGTCTAAAGATAGACGAGTTTTCAAGGGCCAAGATGGATGCAACCGCGAAGGAGTTGGCTGAGGAAAAATCCTTAGCGTATTCATGCCTAAACTGAAATCGTGATTAATTCTTATCTATCAAGGGAAATAAACATTGGAAGATGAATGAAATAAATGGAATTTTAGTTTATTTTCACATACTAATATGTTGAATCATCTTTTCACTATTGACAAAATATGATTCCTTGTCTCTAAATTCTTTCACTTTCTACTCTCGTATAATCAAACTACTTTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g090710.2.1SL2.50ch01:84350080..84352424335+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g090710.2SL2.50ch01:84349917..843526032,687+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g090710.2.1.1SL2.50ch01:84349917..84350129213+n/a
exonexon:Solyc01g090710.2.1.2SL2.50ch01:84350872..84351030159+n/a
exonexon:Solyc01g090710.2.1.3SL2.50ch01:84351115..84351290176+2
exonexon:Solyc01g090710.2.1.4SL2.50ch01:84351366..84351643278+2
exonexon:Solyc01g090710.2.1.5SL2.50ch01:84351720..84351855136+n/a
exonexon:Solyc01g090710.2.1.6SL2.50ch01:84351974..84352085112+1
exonexon:Solyc01g090710.2.1.7SL2.50ch01:84352330..84352603274+n/a
intronintron:Solyc01g090710.2.1.1SL2.50ch01:84350130..84350871n/a+n/a
intronintron:Solyc01g090710.2.1.2SL2.50ch01:84351031..84351114n/a+n/a
intronintron:Solyc01g090710.2.1.3SL2.50ch01:84351291..84351365n/a+n/a
intronintron:Solyc01g090710.2.1.4SL2.50ch01:84351644..84351719n/a+n/a
intronintron:Solyc01g090710.2.1.5SL2.50ch01:84351856..84351973n/a+n/a
intronintron:Solyc01g090710.2.1.6SL2.50ch01:84352086..84352329n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17689426%2Fdetails feature 17689426
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