Solanum lycopersicum mRNA Solyc01g090730.2.1
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Name | Type |
Length
1,215
|
Organism |
Description
Squamosa promoter binding protein 1 (AHRD V1 *-*- Q1MU24_PHYPA); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box
|
Location(s)
SL2.50ch01:84368145..84372011
|
Ontology term(s) |
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005634
- Length
- 3867
![]() | spliced mRNA sequence, including UTRs |
>Solyc01g090730.2.1 Squamosa promoter binding protein 1 (AHRD V1 *-*- Q1MU24_PHYPA); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box
CCAACTACAAAATATTCCAAACTTTTTTTTTTCTTCTTCATTTTCAAAAATTCAATTTCCCCACTCTATTTATTTGGCTATCAAAGTGAGGGGAAAAAAAAATTGAGAAAAAATGTTGGACTATGAATGGGAAAATCAATCTAGTTTTATGTTTACAAGTGATCAAAACACTCAAGAAGAAAATGACCAAAATAACAATCAATTTTTGGATCCTCAAGCACATTTTCCTCATATAACAAGTTACCAACACCCGCAGCAGCAGCAACAACAACAATTACAAAATCCGCATTTTCCCCAATTTCAAGCAACACCAAATAACACCCATTTAATTAGCTCCATGTACGATCCACGCGCTTATGGCGTTCCGTACACGCAAACACACGACACATCCATGCTTTCTCTACAACCAACGGGTGGATTTATGGTAGTGCCGAAGAGCGAACCGCAATTTGGAGGCGGAATTCATGATTTTTCAAGTAGCAGTAGTCGGATTGGGTTGAATTTGGGCGGGAGAACTTATTTTGCTTCGTCATCGGAAGATGATTTTGTGAATCGGCTTTACCGGCGGACTCGCGCGGTTGACGCCGGTTCAGTGAACTCGCCCAAGTGTCAAGCTGAAGGGTGCAATGCCGATCTCACTCATGCAAAGCACTACCACCGACGGCACAAAGTGTGTGAGTTTCACTCCAAAGCCTCTACCGTTATCGCCGCCGGTTTGACTCAGCGTTTCTGCCAACAATGCAGCAGGTTTCATGTTCTGTCGGAATTTGATAACGGAAAAAGAAGTTGCCGGAAACGGTTAGCAGATCACAACCGGAGAAGAAGGAAGAATATTCAGCAAGAAAACAACAAAAAGCAGCCTCAGCCTTCATCAAAGTCTCCAGCAGAATCAGGAGCACAATCATCAACAGTGACAGTGGCCATATCACCACCAAGAATTCCAGTGGATGGATTTAGGCAAAGAACATACCAGCAAGTTACAACTTCTTCTTCTTTTCCAATGGGTGACTAAAATATTTTTATTTTTCAATAATTAATTATTAGTATGATTATTATTTCAAACTTATGCTTTAATGGCCATAACAATCTAGTATATGTTAGTACTAATTACATTATAGGAAAGTTAATTTAGATATGAAATTATGATTAATGATGTAATGGAGAGGATCAGGTTAATGTTAACCCTTTCTAGCTTGTGTGCTCCACCTAATTCAT
CCAACTACAAAATATTCCAAACTTTTTTTTTTCTTCTTCATTTTCAAAAATTCAATTTCCCCACTCTATTTATTTGGCTATCAAAGTGAGGGGAAAAAAAAATTGAGAAAAAATGTTGGACTATGAATGGGAAAATCAATCTAGTTTTATGTTTACAAGTGATCAAAACACTCAAGAAGAAAATGACCAAAATAACAATCAATTTTTGGATCCTCAAGCACATTTTCCTCATATAACAAGTTACCAACACCCGCAGCAGCAGCAACAACAACAATTACAAAATCCGCATTTTCCCCAATTTCAAGCAACACCAAATAACACCCATTTAATTAGCTCCATGTACGATCCACGCGCTTATGGCGTTCCGTACACGCAAACACACGACACATCCATGCTTTCTCTACAACCAACGGGTGGATTTATGGTAGTGCCGAAGAGCGAACCGCAATTTGGAGGCGGAATTCATGATTTTTCAAGTAGCAGTAGTCGGATTGGGTTGAATTTGGGCGGGAGAACTTATTTTGCTTCGTCATCGGAAGATGATTTTGTGAATCGGCTTTACCGGCGGACTCGCGCGGTTGACGCCGGTTCAGTGAACTCGCCCAAGTGTCAAGCTGAAGGGTGCAATGCCGATCTCACTCATGCAAAGCACTACCACCGACGGCACAAAGTGTGTGAGTTTCACTCCAAAGCCTCTACCGTTATCGCCGCCGGTTTGACTCAGCGTTTCTGCCAACAATGCAGCAGGTTTCATGTTCTGTCGGAATTTGATAACGGAAAAAGAAGTTGCCGGAAACGGTTAGCAGATCACAACCGGAGAAGAAGGAAGAATATTCAGCAAGAAAACAACAAAAAGCAGCCTCAGCCTTCATCAAAGTCTCCAGCAGAATCAGGAGCACAATCATCAACAGTGACAGTGGCCATATCACCACCAAGAATTCCAGTGGATGGATTTAGGCAAAGAACATACCAGCAAGTTACAACTTCTTCTTCTTTTCCAATGGGTGACTAAAATATTTTTATTTTTCAATAATTAATTATTAGTATGATTATTATTTCAAACTTATGCTTTAATGGCCATAACAATCTAGTATATGTTAGTACTAATTACATTATAGGAAAGTTAATTTAGATATGAAATTATGATTAATGATGTAATGGAGAGGATCAGGTTAATGTTAACCCTTTCTAGCTTGTGTGCTCCACCTAATTCAT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc01g090730.2.1 | SL2.50ch01:84368256..84371808 | 300 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc01g090730.2 | SL2.50ch01:84368145..84372011 | 3,867 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc01g090730.2.1.1 | SL2.50ch01:84368145..84368891 | 747 | + | n/a |
exon | exon:Solyc01g090730.2.1.2 | SL2.50ch01:84370050..84370177 | 128 | + | n/a |
exon | exon:Solyc01g090730.2.1.3 | SL2.50ch01:84371672..84372011 | 340 | + | 1 |
intron | intron:Solyc01g090730.2.1.1 | SL2.50ch01:84368892..84370049 | n/a | + | n/a |
intron | intron:Solyc01g090730.2.1.2 | SL2.50ch01:84370178..84371671 | n/a | + | n/a |
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