Solanum lycopersicum mRNA Solyc01g093960.2.1

mRNA details  
Name
Solyc01g093960.2.1
Type
mRNA
Length
986
Organism
Solanum lycopersicum
Description
MADS box transcription factor (AHRD V1 ***- Q2NNC0_ELAGV); contains Interpro domain(s) IPR002487 Transcription factor, K-box
Location(s)
SL2.50ch01:85535132..85540286
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
5155
Nb exon
8
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g093960.2.1 MADS box transcription factor (AHRD V1 ***- Q2NNC0_ELAGV); contains Interpro domain(s) IPR002487 Transcription factor, K-box

GCTAACCCCACCTCCCCTATTCATTACTGATCATAACATAAATAATCTTTTTGATAGAATTAGCTAGCTCTAGGAATAGAAGAAGAAAAAAATGGGGAGAGGGAGAGTGGAACTAAAGAGAATAGAGAACAAAATCAACCGTCAAGTGACATTTTCTAAGAGGAGGAATGGTTTGTTGAAGAAAGCTTATGAATTATCAGTGCTTTGTGAGGCTGAAGTTGCTCTCATCATCTTCTCTAGTCGTGGAAAGCTCTATGAGTTTGGTAGTGCAGGTATCACTAAAACCCTTGAGAGGTACCAACGTTGTTGCCTTAATCCTCAAGACAATTGTGGTGAAAGAGAAACACAGAGCTGGTACCAAGAGGTCTCTAAATTAAAGGCCAAGTTTGAAGCACTTCAACGAACTCAAAGGCACTTGCTTGGTGAAGATCTTGGAGCACTAAGTGTGAAGGAGTTGCAAAATCTTGAAAAACAACTTGAAGGTGCACTTGCACAAGCTAGACAAAGAAAGACACAAATAATGATGGAACAGATGGAGGAGCTTCGTAGAAAGGAGCGTCATCTTGGTGATGTGAACAAGCAGTTGAAGATTAAGGTTTCTCTTGAACTATCATCGTTTGAGGGTGAAGGACAAGGTGTTCCTTTTCCATGGAGTAATTGTAATGCATCTTTAGATGAAGCAGGAAGCAGCACCTTTCATGTCCACCATTCTCAATCAAATCACATGGACTGTGATTTACCTGATCCAGTTCTTCAAATAGGGTATCATCAGTATATGGCTGCAGATGGAGCCTCAGGGTCAAGGAACATGGCTGTTGAGAGTAACATTATCCATGGTTGGGGTCTTTAATTTCTAATTCTAATTATGGATTATACTAGTACAAGTTTTTTGCTTTTAAGTTTTTCAGATTAAAAAACTCAAGTGACATATAATTATGATTTGAAATGCATGTTATATAGTAATGTATAATTTTAGCAAGTGTCAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g093960.2.1SL2.50ch01:85535267..85540195253-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g093960.2SL2.50ch01:85535132..855402865,155-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g093960.2.1.1SL2.50ch01:85540014..85540286273-1
exonexon:Solyc01g093960.2.1.2SL2.50ch01:85536752..8553682776-n/a
exonexon:Solyc01g093960.2.1.3SL2.50ch01:85536610..8553667162-1
exonexon:Solyc01g093960.2.1.4SL2.50ch01:85536368..85536467100-n/a
exonexon:Solyc01g093960.2.1.5SL2.50ch01:85536094..8553613542-n/a
exonexon:Solyc01g093960.2.1.6SL2.50ch01:85535737..8553579963-n/a
exonexon:Solyc01g093960.2.1.7SL2.50ch01:85535502..85535647146-1
exonexon:Solyc01g093960.2.1.8SL2.50ch01:85535132..85535355224-n/a
intronintron:Solyc01g093960.2.1.2SL2.50ch01:85536828..85540013n/a-n/a
intronintron:Solyc01g093960.2.1.3SL2.50ch01:85536672..85536751n/a-n/a
intronintron:Solyc01g093960.2.1.4SL2.50ch01:85536468..85536609n/a-n/a
intronintron:Solyc01g093960.2.1.5SL2.50ch01:85536136..85536367n/a-n/a
intronintron:Solyc01g093960.2.1.6SL2.50ch01:85535800..85536093n/a-n/a
intronintron:Solyc01g093960.2.1.7SL2.50ch01:85535648..85535736n/a-n/a
intronintron:Solyc01g093960.2.1.8SL2.50ch01:85535356..85535501n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17691075%2Fdetails feature 17691075
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