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Solanum lycopersicum mRNA Solyc01g094350.2.1

mRNA details  
Name
Solyc01g094350.2.1
Type
mRNA
Length
1,756
Organism
Solanum lycopersicum
Description
ATP-dependent RNA Helicase (AHRD V1 ***- Q7PDT0_PLAYO); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch01:85862572..85871544
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
8973
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g094350.2.1 ATP-dependent RNA Helicase (AHRD V1 ***- Q7PDT0_PLAYO); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

CATATCGATTTTTCCTAGAATTTTAGGTGGAATTTTCGTTGTGTTTCTCTATCGCCGTTGGTTGCCGGAGATCGTACATTCTCGCCGACTTACAAAGTTTTGTACATAATACTTCTTTAGTTTCTTCAGGAGACCTAGTTGGTGATGAATCCGAGACCAAGATTTCAATCGCCAGGGATGGGGGGCCGTGGAGGCGGCGGCGGCGGGAGTATGCATCCAAATACTAACCCAAACTTTCAACACAGAAATCCTCAGCAGTACATTCAGAGAGGGCCAGCACCCTATCAGCAGCCGCAGCCGCAACAACAACAACAACAGCATTTTCAGAATCAGCAAACACAGCAGTGGCTTAGAAGAAACCAGTTGCCATCTCCCGATTCCACCGTTGCCGAGGTTGAAAAGAATGTACAGTCCGAAGCCGTTGACCAGAGTTCACAAGAATGGAAGGCTAGATTGAAGATACCACAACCTGATACTCGATACAGAACAGAGGACGTGACAGCAACTAAGGGAAATGAATTTGAAGACTACTTTCTTAAGCGCGAACTGCTTATGGGAATTTATGAAAAGGGATTTGAGAGACCATCGCCAATCCAAGAGGAGAGCATTCCAATTGCGCTAACTGGTAGTGACATATTGGCTAGGGCCAAAAATGGAACTGGGAAGACTGCTTCCTTCTGCATTCCTGCTTTAGAGAAAATTGATCAAGACAAGAATGTGATTCAAGCTATTATTCTTGTCCCAACTCGAGAATTGGCCCTCCAAACATCTCAAGTTTGTAAAGAACTCGGGAAGCACCTAAAAATTCAAGTCATGGTTACCACTGGGGGGACTAGCTTAAAGGACGACATAATGAGACTGTATCAGCCAGTTCATTTACTTGTTGGTACTCCTGGAAGAATTCTTGACCTTGCAAAAAAGGGTGTGTGTGTTTTGAAAGATTGCTCCATGTTTATCATGGATGAGGCTGATAAGCTTCTTTCACCAGAATTCCAACCTTCCATCGAGCAGCTGATCTGCTTCCTACCTGCAAATCGCCAGATTTTGATGTTTTCTGCAACATTTCCTGTTACTGTCAAAGACTTTAAAGAAAGATATTTGCACAAGCCATATGTTATCAACCTCATGGATGAACTTACACTCAAGGGTATAACACAATTTTATGCTTTCGTTGAAGAAAGACAGAAGATTCACTGCCTTAACACTCTCTTCTCAAAGCTTCAAATTAACCAATCAATTATTTTTTGCAACTCTGTAAATCGTGTGGAACTTCTTGCCAAAAAGATTACTGAGCTGGGCTATTCATGCTTCTACATTCATGCTAAGATGCTTCAAGATCATAGAAACAGGGTGTTTCATGACTTCCGCAATGGTGCCTGCAGGAACCTTGTTTGTACTGATTTGTTTACTAGAGGAATAGATATTCAAGCAGTTAACGTTGTTATCAATTTTGATTTCCCTAAGAACTCAGAAACGTATTTGCACAGGGTTGGACGATCAGGGAGATTTGGACACCTTGGTTTGGCTGTTAGCCTGATTACTTTTGAGGATCGCTTCAATTTGTATAGAATTGAACAAGAATTAGGAACAGAGATCAAGCAAATCCCTCCACAGATAGATCAAGCTATATATTGTCAGTGAACCAGTTAGCTGTGGTTGATGGTGCTGCAAGTGGAGATGCCAGATTTCACTTTCTAAGGGCGTGCAACTCCAGAGTTCAAAAGAGGAACTTGGCAGATTCATGGTTGTGGAACAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g094350.2.1SL2.50ch01:85862715..85870609499+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g094350.2SL2.50ch01:85862572..858715448,973+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g094350.2.1.1SL2.50ch01:85862572..85863002431+n/a
exonexon:Solyc01g094350.2.1.10SL2.50ch01:85871464..8587154481+1
exonexon:Solyc01g094350.2.1.2SL2.50ch01:85864843..8586490361+n/a
exonexon:Solyc01g094350.2.1.3SL2.50ch01:85866261..85866495235+1
exonexon:Solyc01g094350.2.1.4SL2.50ch01:85868340..85868578239+n/a
exonexon:Solyc01g094350.2.1.5SL2.50ch01:85869011..85869262252+2
exonexon:Solyc01g094350.2.1.6SL2.50ch01:85869350..85869530181+n/a
exonexon:Solyc01g094350.2.1.7SL2.50ch01:85870205..8587029389+n/a
exonexon:Solyc01g094350.2.1.8SL2.50ch01:85870375..8587044874+2
exonexon:Solyc01g094350.2.1.9SL2.50ch01:85870531..85870643113+n/a
intronintron:Solyc01g094350.2.1.1SL2.50ch01:85863003..85864842n/a+n/a
intronintron:Solyc01g094350.2.1.2SL2.50ch01:85864904..85866260n/a+n/a
intronintron:Solyc01g094350.2.1.3SL2.50ch01:85866496..85868339n/a+n/a
intronintron:Solyc01g094350.2.1.4SL2.50ch01:85868579..85869010n/a+n/a
intronintron:Solyc01g094350.2.1.5SL2.50ch01:85869263..85869349n/a+n/a
intronintron:Solyc01g094350.2.1.6SL2.50ch01:85869531..85870204n/a+n/a
intronintron:Solyc01g094350.2.1.7SL2.50ch01:85870294..85870374n/a+n/a
intronintron:Solyc01g094350.2.1.8SL2.50ch01:85870449..85870530n/a+n/a
intronintron:Solyc01g094350.2.1.9SL2.50ch01:85870644..85871463n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17691666%2Fdetails feature 17691666
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