Solanum lycopersicum mRNA Solyc01g095710.2.1

mRNA details  
Name
Solyc01g095710.2.1
Type
mRNA
Length
4,313
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase (AHRD V1 *-** Q173G5_AEDAE); contains Interpro domain(s) IPR014001 DEAD-like helicase, N-terminal
Location(s)
SL2.50ch01:86897333..86905658
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0004386
  • GO:0008026
  • GO:0005524
Length
8326
Nb exon
11
Sifter term
  • GO:0004004
  • GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g095710.2.1 ATP-dependent RNA helicase (AHRD V1 *-** Q173G5_AEDAE); contains Interpro domain(s) IPR014001 DEAD-like helicase, N-terminal

TTGGGCAAAATTTTTAGCAGCTCCATAAACTCACCCTTCCAAACCACCGTTAAACACCCAAAACCAGCGACCGGACTCCGTTTTGAGTTTGAGGTCTTCCGGCGGAGCTCTGTTTATGATTTCTACCTGAGTTAGAGTTTCTAAATGGGCCCGTTGTTCACTATTTCTTGTTCTGCCTAATTCTAGTTAATTATTTTTTCCCTTTAAGTTTTCTTGCTTCGTCTGTCTTACCCTAGAACCATCCTTGCCATTGAGATTACTGTGTGGTTGCTTGTTTAGTCGTGATAATGGAGTTTAGTGCAAATATGAACCTCGATACAGACAACTGGAGCCAGAATGATCAAGACAGCAATGCACTTATATTGCCGGACAAGAAAAAGAAGAAGAAGAAAGAAAAGGAACAGGTGTCCAAAAAGCTTAAGCCTAAGAATAATAGTATTAAGTTAAGCCAATCGCAGAAAAAAAAGTTGAAGAAACTCGAGGAAGACAAGGAGAAGGCAGTACTTTTAGCAGAAAGCATTAAGACCTTGAAGAAGCACCAGATCCAAGATGATGTTTATTCACTTATGTGGTCTTCAAGGAACTTGGGTCAGGGTGAAACTAGCCGAGAAAAACGTAGAAGAGAAATACAATTTTCTAGGGCAGGGCTAGACGTGCCACATAGGGATCGACCAGTCAAGAAGAGGACTGTTGACGACCTATCTAGTGAGGTCTTGTATGATTCTGAAGAAATGCAGCTTAGTCCAATAGTCAATGGCCACCTTTTGCAGTCCTCCATAGGAGAAGGTGGTGTTCCAAGTGATGCACCCATTACACCAGGGTCTTCTCAGGAGTTGGCTTGCCATAGCAAACTTTTAGTATGCGATAGAGATGCTTCTGTGCCAAGTAAGCAAAAAGAGGATAGAACTGCAGAATGCTTAAAGTCAGATTATCTGCAAAATCACCTTTCTGTTCATGATTGTCATAATGAGGGAAGGAGGAAATCAACGGATGGTGCCAAAGCTGTTCAAAATGCCATCCTGAGCAATAGTACCAACTCAGCTAACTGTAGTTCTGAAAGAGATTTAACAACTCCAGTTGTGGTGCATGTTTCAAGACCAAAGGAGGTTGAAAATAACAGGAGCAATCTGCCGATAGTCATGATGGAGCAGGAGATAATGGAAGCCATAAATGACAACACTTGTGTAATAGTTTGTGGTGAGACTGGTTGTGGTAAGACAACCCAAGTGCCACAGTTCCTTTATGAAGCTGGCTATGGTTCAAATCATTCCAATGCTTGTGGTGGTATTATTGGTGTGACTCAACCACGCCGTGTTGCGGTACTTGCAACTGCCAAGCGAGTGGCATTTGAGCTTGGTGTTCATCTTGGCAAAGAGGTTGGTTTTCAAGTTAGACATGACAGGAGGATAGGAGACAATTGTTCCATAAAGTTCATGACTGATGGAATTTTGCTTCGCGAACTGCAGAATGATTTTCTTTTAAGGCGTTACTCGATCTTAATCTTGGACGAGGCTCACGAGAGGAGCTTGAACACCGATATACTAATCGGTATGCTTTCACGTATAATAAGAGAGCGTCAGAAAGAATATGAGGAGCAACAGAAGAAGCTTCTTTCGGGACAAACAATAATCCCTGAAGAGAGAGTTTATCCACTGAAACTTGTGCTGATGAGTGCTACACTTCGAGTTGAGGACTTTATATCTGGCAGAAAAATTTTCCGTGATCCTCCCCCTGTAATTGAAGTCCCTACTCGCCAATACCCAGTAACTATTCATTTCTCGAAGAGAACTGAGATGGTGGACTATGTTGGCCAAGCATATAAAAAAATATTGTCAATTCACAAAAGATTGCCACCTGGTGGTATACTTGTATTTGTGACAGGGCAAAGGGAAGTTGAATACTTGTGTCAAAAGCTGCGCAAAGCTTCTAAGGAGATAGTTGATAGAGCTTCAAAAGATCATAGTGAGCTATCTTTGGCATCTGAAGGGAATACTATCAGGGAGAAGGTTGACAGGGAGATAAGTGAGGCATTTGATGTTGAAAGGAGTTCTTTAAATGAGATAACTGAAAGCTTCAATTCCTATGATGAGGATCATGGGGAATCTTATGAAGATGACTCAGATATTTCGTATGATTCAGCAGATGATAGTGATTTGGATATTTATAGTGATGATGATGCAGGGCTGCTAAACCAGAAGTCTCCAAGCTCTGATGGTAAGTTAGATGTCTTAGGTGAGGAGGGAAGCCTAAGATCACTGAAAGCTGCTTTTGAAGCTTTGGCCGGTAAAAAAATGTCAGAGCCTGATTCCGGCGGAAAGGAACTTGTTCCTATCACTGAAGAAGGGATGACCTCAAATGAATCTGAACCTCTGTTAAGCAAGGTTAGGATCGGGGCTAACGGGACTTGTGCTGGTCCAATGTGTGTTCTACCTCTTTATGCTATGCTTCCGGCATCCGCACAGCTTCGTGTGTTTGAAGAGGTCAAGGAAGGAGAACGCCTTGTTGTTGTTGCCACTAATGTGGCTGAAACCTCATTGACCATTCCTGGTATTAAATATGTGGTTGATACAGGCAGAGAAAAGGTCAAAAACTACAACTCTTCTAACGGTATGGAAGGATATGAAATACAATTTATAAGTAAGGCTTCAGCTTCTCAGCGTGCAGGAAGGGCAGGAAGAACAGGTCCTGGGCACTGTTATCGGCTTTATTCTTCTGCAGTCTTCAATGACATGTTCTTTGACTTCTCAAATGCAGAAATATTGAAAGTACCAGTTGATGGTGTTGTCCTACTTCTGAAGTCCATGCATATTGATAAGGTTGCTAACTTCCCTTTCCCGACTCCTCCTGAGCCAACTGCCTTAGTAGAAGCAGAGCGTTGCTTAAAGGTTCTTGAAGCACTTGATAGCAATGGAAGGCTGACACCTCTAGGTAAGGCCATGGCACAATATCCGATGAGTCCTCGCCACTCCCGTATGCTCCTTACAGTAATCCAAATTATGCAAAAGATGAAAGATTATTCCCGCGCAAACACAGTCTTGGCTTATGCAGCTGCAGCAGCTGCAGCTTTGAGCTTGTCGAATCCTTTCCTTATGGAGTTTGAAGGGAAGAATAAAGATCTAGATGGCTTGAAGCAGGATGAAAAACCAGGATCAGCAGAAACTGAGAGATACTTAGGGAAAGAGGAGAGAATGAGGATAAAAAAGCTGAAAGAAACTGCTAGAGTGTCTCGTGCAAAATTTTCGAACCCCACAAGTGATGTTTTGTCCGTGGCATATGCTCTGCAATGTTTTGAACTTTCTGGTCAACCACTGGAATTCTCCAAAGACAACACGTTACATTTTAAAACAATGGAGGAAATGTCTAAGTTGAGGAAGCAGCTAATTAATCTTGTTTTCAACTCCAAACTATGTGACTCACAGCAAAATTTCTCATGGCCTCACGGTACTTTGGAAGATGTAGAATGTGCTTGGAGGATTCCTTCAAACAAATGCCCTCTTCAACTGAATGAGGAGGAGATTCTGGGCCAAGCTATTTGTGCTGGCTGGGCTGACAGGGTTGCTAAACGTATTAAGGATGTTTCATCCTTATCAGAATCTGACATGAATGTTCATGCAGTTCGATATCAGGCTTGCTTGGTAAAAGAAACTGTCTTCCTCCATCGAAGGTCATCTATTGCTAAATCTGCTCCGCAATATTTAGTCTACACTGAACTACTGCATACAAAAAGGCCATATATCCAAGGAGCAACTAGCGTGAAAGAGAATTGGCTCATTAAGTATGCTCCATCACTATGCAGTTTCTCTGCGCCCCTCTCAGATCCAAAACCTTATTATGACCCACTGAATGACCAGGTCCTCTGTTGGGTGAGTCCAACTTTTGGTCCTCATCTATGGAAGCTCCCTCTGCATGGTTTGCCAATCGCAGATGATTTCCTCCGGGTGGCAGTATTTGCTAGTTCCTTGCTTGAAGGCAAAGTTCTGCCTTGCCTAAAATCTGTACAGAAATTATTGGCAGCCTCACCAGCTAGCATTTTGAAGCCTGAGGCGTTGGGCCTCAAGCGGGTTGGCGATCTTTTATACAAGATGAGGATCAAGAAGAAAGGGATTGATAGTTGTATCAAGCTAAGGAAGTTGTGGGATGATAATCCTCAAGAATTGTTTCCAGAAATTTTGGATTGGTTTCAGGAAGGATTTCATGAGCATTTTGAAGATCTTTGGGCAAAGATGCAACTTGAAATACTTTTAGACCCAAAAAGACGTTTTTCGGAGAAGGTCAAGAGAAAGAAAAGGAAACCACGAGCTTCCGATGATTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g095710.2.1SL2.50ch01:86897619..869056581,342+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g095710.2SL2.50ch01:86897333..869056588,326+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g095710.2.1.1SL2.50ch01:86897333..86897663331+n/a
exonexon:Solyc01g095710.2.1.10SL2.50ch01:86901594..869028291,236+n/a
exonexon:Solyc01g095710.2.1.11SL2.50ch01:86904162..869056581,497+n/a
exonexon:Solyc01g095710.2.1.2SL2.50ch01:86897781..8689785373+n/a
exonexon:Solyc01g095710.2.1.3SL2.50ch01:86897928..8689800578+1
exonexon:Solyc01g095710.2.1.4SL2.50ch01:86898101..8689815050+n/a
exonexon:Solyc01g095710.2.1.5SL2.50ch01:86898241..8689830161+n/a
exonexon:Solyc01g095710.2.1.6SL2.50ch01:86898383..86898778396+1
exonexon:Solyc01g095710.2.1.7SL2.50ch01:86898908..86899153246+n/a
exonexon:Solyc01g095710.2.1.8SL2.50ch01:86899285..86899515231+n/a
exonexon:Solyc01g095710.2.1.9SL2.50ch01:86901202..86901315114+n/a
intronintron:Solyc01g095710.2.1.1SL2.50ch01:86897664..86897780n/a+n/a
intronintron:Solyc01g095710.2.1.10SL2.50ch01:86902830..86904161n/a+n/a
intronintron:Solyc01g095710.2.1.2SL2.50ch01:86897854..86897927n/a+n/a
intronintron:Solyc01g095710.2.1.3SL2.50ch01:86898006..86898100n/a+n/a
intronintron:Solyc01g095710.2.1.4SL2.50ch01:86898151..86898240n/a+n/a
intronintron:Solyc01g095710.2.1.5SL2.50ch01:86898302..86898382n/a+n/a
intronintron:Solyc01g095710.2.1.6SL2.50ch01:86898779..86898907n/a+n/a
intronintron:Solyc01g095710.2.1.7SL2.50ch01:86899154..86899284n/a+n/a
intronintron:Solyc01g095710.2.1.8SL2.50ch01:86899516..86901201n/a+n/a
intronintron:Solyc01g095710.2.1.9SL2.50ch01:86901316..86901593n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17693269%2Fdetails feature 17693269
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