Solanum lycopersicum mRNA Solyc01g095740.2.1

mRNA details  
Name
Solyc01g095740.2.1
Type
mRNA
Length
2,883
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase DBP4 (AHRD V1 *-** C1GZM0_PARBA); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch01:86937684..86944774
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
7091
Nb exon
10
Sifter term
GO:0003723
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g095740.2.1 ATP-dependent RNA helicase DBP4 (AHRD V1 *-** C1GZM0_PARBA); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

TCCATGCCGCTCAAGTTATTACCACAGCTTCGTTTCTTCAATCCAACATTCCCACTTACCCATTTTCCCACCATGAAATGCAATTCAACTTTGAAGCCTAAAACAATACCAGCTTTTTCTAGAATGTTTCCACACAAGCTAAAGTATAGGTCAATTGCGTTTCCAATTTTAGCAGCTCAAGAACAAGAGCTTCGTAGGTTCTCGAGCCGTTCAGGGAGACCAAGACCCGGGTCGGGTGCTGACGTGCGAGTTTCGAAGAGCTTGATTGAAGATGAAGCTGAACTCAGTGATTGGGTGAGTGGGTTGAGGTCTGATTCTTCGTTCACGAAAACTCAGGTGTATAGTGAGAGTGATGATAATGAGGGCGACAGGGAAAGGGGTAGGGGTAGATTTAGTAATAGGCGTAATGGTGGAGAAGATAGAGGTGAAAAGAGAAGGAGAGATGATGATTTTAGTGGACCTGGTAGGAGGGGTGGTGGCCCAATGCAGTCGAATTCGAGGAATGGGGGAAGGTTTGGAAGTGAATATTCGGGTGGAAGAGGTGCGGGACGAGGTGGAATGCAGTCGAATTCAAGAAACGAAGGGAGGTTTGGAAATGACAGGGGGAGTAGATATGAGGGTGGAAGAGGTGATGGTGGTCGAGATCGAAAGGAGTCCTCCTCAAGGGGAGGAAGATTTGGAAGTGATGTAAGGAGTGGAAGTGAGGGTAGAAGAAGTGGAGGCCGAGATCGTATGGAGTCATTTTCGAAGGGAGGAAGGTTTGGAAGTGATAATGGGAGAGAAAGTGAAGGTAGAAGAAGTGGAGGCCAGGATCGGACAGAGTCGCTTCCAAGGAAGGGAGGGAGGTTTGGAAGTGAAATGGCAAGTTCGAGTGACAATAGGGGTAAAAGCAGGATTGGTAGTGGATATGGTAGAGATATGGCAGCACAAGGTGGTAATGGTAGGTTAGGGAGGAAAGAAGGGGCAGGTATGGGTCGAGGTAGTTCCATGCTGTTGGATGAAGATGATACCGATAATGAGGATGACGAAGAGGAAGAGGAGAATGGTTATAAGGGGTTCCGAGATTTGATTGACAGCGAGGAAGAAAGTGAAGAATCTGATGAAGACAATGAGGTCGAGGATGAAAAGATGGCCTCATTGGAGGAGGACAGTCCAAGGGCATCAAGCCCGAGCTCACATGGAAAAAGTGATTCCCACCTCACCGAAACCAGGTTTGATCAGTTTCCTCTCTCTCCCTTGTCTCTGAAAGGAGTTAAAGATGCTGGATACAAAACGATGACTGTAGTGCAGGAGGCAACCCTTCCCATTATTCTAAAAGGCAAGGACGTTCTGGCCAAGGCAAAGACTGGCACTGGGAAAACTGTAGCATTTTTGCTTCCTTCAATTGAAGTTGTTGTAAAATCACCCCCCAACACCCGTGATCAAAAGAGGCCACCAATTCTGGTGCTTGTGATATGCCCTACCCGGGAGCTTGCAACTCAAGCAGCTGCCGAGGCCAACACCTTGTTAAAATATCACCCTTCAATTGGGGTTCAAGTTGTTATAGGCGGAACAAGGCTTGCACTTGAGCAGAAAAGGATGCAAGCAAATCCATGTCAGATACTTGTGGCGACACCTGGGAGACTCAGAGATCATGTAGAGAATACAGCAGGATTTGCTACTCGGTTGATGGGTGTTAAAGTGTTGGTCCTTGATGAAGCCGATCATTTGTTGGATATGGGATTCCGTAAAGAAATTGAGAGAATCATCTCTGCTATTCCAAAACAGCGCCAAACACTTCTCTTTTCTGCAACAGTTCCACCGGAGGTCCGTCAAATTTGTCATATTGCTTTGAAAAGAGACCACGAATTTATCAATACTGTTGAGGAAGGCAGTGAAGAGACACATGCACAAGTTCAGCAGATGCATCTGGTTTCTCCTCTAGAATCACACTTTTCCCTTCTTTATGCTCTACTAAAAGAGCACATTGCTGATGATGTTAACTATAAGGTTCTTGTATTTTGCACAACTGCAATGGTAACAAAACTCGTTGCTGAACTTCTTGGTGAACTTAACTTAAACGTCCGGGAGATTCATTCTCGTAAGCCACAAAGCTATAGAACAAGGGTTTCAGATGAATTTCGCCAGTCAACAGGTCTTATTCTAGTTTCCTCAGATGTTTCTGCTCGTGGAGTGGATTATCCAGATGTTACCTTAGTTGTACAGATTGGAGTGCCAGCTGATAGACAGCAGTACATCCATCGTCTAGGTAGAACCGGACGGAAAGGAAAAGAAGGACAAGGCATTTTGTTGTTGGCTCCATGGGAGGAATTCTTCTTGTCTACAATTAAAGATTTGCCCGTATCAAAGGCACCTGTACCTCTGCTTGATCCAGAGGCCAAGAAAAAGGTGGAACGTGCGTTAGCCCATATAGAAATGAAAACCAAAGAATCTGCATACCAGGCATGGCTTGGTTACTATAATTCCAACAGGTCTATCGGTAAGGACAAGTACAGACTTGTTGAACTTGCAAACGAGTTTAGTCGGACCATGGGGCTTGACAACCCTCCAGCAATTCCAAAGCTTGTTCTTGGGAAAATGGGATTGAAAAATATTCCTGGACTACGTTCCAAGTAATTGAGATAGTGTTGCTGCTTCTTCTCATACACATATATGCATACGAAGTGTATATATACACAGCATAGGCCGTGCAATGCAACAATTAATTTCGAGCTAAGTGCTGTTTTTACCCATTGTTTGTAATTTTTTTGCTAGGGAGGATTCAAAGCCTTGACAGAACATAAGTTGAGTTCCTTTTTTACTAATAGGAAATTTGGCCTTTCCTCTTTCTAGTTGAACTATTTTGTCTCTTCATTTATTAGTAAGTGGGAATTACAAACAGCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g095740.2.1SL2.50ch01:86937950..86944771871-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g095740.2SL2.50ch01:86937684..869447747,091-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g095740.2.1.1SL2.50ch01:86943564..869447741,211-1
exonexon:Solyc01g095740.2.1.10SL2.50ch01:86937684..86938178495-n/a
exonexon:Solyc01g095740.2.1.2SL2.50ch01:86942824..86942930107-2
exonexon:Solyc01g095740.2.1.3SL2.50ch01:86942504..8694255956-n/a
exonexon:Solyc01g095740.2.1.4SL2.50ch01:86941032..86941256225-n/a
exonexon:Solyc01g095740.2.1.5SL2.50ch01:86939882..86940088207-n/a
exonexon:Solyc01g095740.2.1.6SL2.50ch01:86939723..8693980987-n/a
exonexon:Solyc01g095740.2.1.7SL2.50ch01:86939541..8693963696-n/a
exonexon:Solyc01g095740.2.1.8SL2.50ch01:86938853..86939068216-n/a
exonexon:Solyc01g095740.2.1.9SL2.50ch01:86938349..86938531183-n/a
intronintron:Solyc01g095740.2.1.10SL2.50ch01:86938179..86938348n/a-n/a
intronintron:Solyc01g095740.2.1.2SL2.50ch01:86942931..86943563n/a-n/a
intronintron:Solyc01g095740.2.1.3SL2.50ch01:86942560..86942823n/a-n/a
intronintron:Solyc01g095740.2.1.4SL2.50ch01:86941257..86942503n/a-n/a
intronintron:Solyc01g095740.2.1.5SL2.50ch01:86940089..86941031n/a-n/a
intronintron:Solyc01g095740.2.1.6SL2.50ch01:86939810..86939881n/a-n/a
intronintron:Solyc01g095740.2.1.7SL2.50ch01:86939637..86939722n/a-n/a
intronintron:Solyc01g095740.2.1.8SL2.50ch01:86939069..86939540n/a-n/a
intronintron:Solyc01g095740.2.1.9SL2.50ch01:86938532..86938852n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17693322%2Fdetails feature 17693322
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