Solanum lycopersicum mRNA Solyc01g096190.2.1

mRNA details  
Name
Solyc01g096190.2.1
Type
mRNA
Length
4,551
Organism
Solanum lycopersicum
Description
Calcium-transporting ATPase (AHRD V1 ***- A8NHF4_COPC7); contains Interpro domain(s) IPR005782 ATPase, P-type, calcium-transporting
Location(s)
SL2.50ch01:87285030..87290897
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016020
  • GO:0008152
  • GO:0016021
Length
5868
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g096190.2.1 Calcium-transporting ATPase (AHRD V1 ***- A8NHF4_COPC7); contains Interpro domain(s) IPR005782 ATPase, P-type, calcium-transporting

GGGATTTATGGTTGTTGCTTCCTTGCAATTGCTAAAGTTTCAATCTTTTTTCTTTTATTTTTTCATGTGGGTACTGTATTAATGACATGATCTGTTTTGATTCTTCTTTATGTGACCGTTATTCTTGTTGTATATGTATAAAGTTGTTTGCTTTGCATGTTTTTTAGTTTCCATATTGCTGTATACAAGTTTGTCGGGTTGTCGATTTTGTTCCTTGATACTTTAATGCTGCTTGGATGGCGTCCCTGTTTTGCTTTTAATTTACTCGTGGTTCACAATTTGTTAGGTCTGTCATAAAAGCTGTCAATTAAAACTCAGTAGAGTTGTAGTTGGAGACACCCCACAAAGTTAGGGTAATGTCTGTGTACCTCATACCCTCCTTCTCCGGACTTATCCTGGGTATGTTGTTGTTATGGTAGTGTTTCTAGTTGGAACTTGTTTTTTTTTTTTTTTTACCTATTATTATGTGAATTTTCTGTTATTTGGTCTTCATGTTTGCTCTGTGTGTTATTTGGTTAGGGCAAAGTCTAATGATATAGTTTCTAGCTTCAGTGATGTTAATTTAGCTTTCCTTCTCTATTATTTTTGCTTAAATTTTATGGTTTTAGTTTTGCACACTAATAATACTACTCCCTCTGTCCAATTTTAAATGGAGCAATTGGAATTTTGAGATTCAAACTTATAAAATTTCAGTGTGATTTTTTTTATATGGCAATTTCAGTGTGAATTCAAATATAGAAGTTTTAAGTTTTTTGAAAATGAAATTTGTATATCTGAAAGCTACTCACAAGTACTAAAATAAATCACAATAATTAACAATTTAAAATATTTAATTGGCATATAAAGAAATTCCGGTTAAAGAAAAACTTGTTTGACTCTCAAAATTCCAATTGTGCCACATAAATTGGGATGGATGGAGTATATTAGTACTTCTAAGCTCAAACTGTTAATACTTGTATCTCTTTTCAGGGAATGAGATTATTGAACATAATTTCTGTGGAATTTAAGTTAAGACTGAGGATTTGATTTGCGATGGAAGAAAAACCATTCCCTGCCTGGTCCTGGTCTGTTGATCAGTGTCTGAAAGAGTACCAAGTAAAATTAGAGAAGGGTCTAAGCACTTATGAAGTAGACAAGAGGCGAGAAAGATATGGTTTGAATGAACTTGAGAAAGAAAAGGGGAAGCCGTTGTGGAGGCTTGTTTTGGAGCAGTTTGATGATACGCTTGTCAAAATCCTCCTTGGTGCAGCCTTCATCTCATTTGTTCTAGCTTATGTGAATCAGGATGAGACTGGAGAGTCAGGGTTCGAGGCCTATGTAGAACCCTTAGTAATCCTCTGGATCTTAGTACTCAATGCAATCGTCGGAGTTTGGCAAGAAAGCAATGCTGAGAAAGCACTGGAAGCATTAAAAGAGATGCAAGGTGAGTCTGCAAAGGTACTCAGAGATGGATATTTAGTACCGGATTTTCCAGCAAAGGAGCTTGTTCCTGGGGATATTGTGGAACTGCGAGTTGGTGACAAAGTGCCAGCTGATATGAGAGTTGCCACTTTAAAATCCTCAACCCTAAGGGTTGAACAAAGTTCTTTGACAGGGGAGTCGATGCCAGTTACTAAAAGCACCGATTTCCTTGCTACGGATGATTGTGAATTGCAGGCCAAAGAGAACATGGTTTTTGCTGGGACAACAGTTGTGAATGGTAGCTGCATCTGCATTGTTGTGAACACGGGGATGTGCACAGAAATTGGTAAGATTCAAAGACAAATCCATGATGCGTCCATGGAAGAAAGTGACACCCCTTTGAAGAAGAAGCTTGATGAATTTGGTAATAGGCTTACATTTGCCATTGGCGTTGTTTGCTTAGTTGTGTGGGCAATCAACTACAAATATTTTCTTTCCTGGGAGGTTGTGGATGACTGGCCTTCTGATTTCCGTTTCTCATTTGAGAAATGCGCATATTATTTCAAGATAGCTGTTGCTCTTGCGGTGGCTGCAATTCCTGAAGGTCTCCCTTCTGTAATCACTACTTGCTTAGCTCTTGGTACTAGGAAAATGGCACAAAAAAACGCGATAGTGAGGAAACTACAAAGCGTGGAAACCTTAGGATGCACAACTGTGATATGTTCAGATAAAACAGGAACCTTGACTACCAATCAGATGTCTGTGTCAGAATTCTTCACATTGGGAAGGAAAACTACAGCCTGTCGAGTTTTTGGCGTTGAAGGGACAACTTATGATCCTAAGGATGGGGGAATAATGAACTGGAATTGTTGCAAAATGGATGCTAACTTGCTACTTATGGCTGAAATATGTGCAATCTGCAATGATGCTGGGGTCTTCTGTGATGGTCGTCTGTTCAAAGCAACTGGACTGCCTACTGAGGCAGCTCTTAAAGTTTTGGTGGAAAAGATGGGAGTACCAGATAGCAAAGCAAGGTGCAAGATCCGCGACGCTCAGATTGTATCGAGCTATTTGATTGATCGCAACACAGTTAAATTAGGATGCTGTGATTGGTGGATGAAAAGATCAAAAAGGGTTGCAACATTGGAATTTGATCGTGTTCGGAAATCCATGGGTGTTATTGTGCGGGAGCCAAATGGGAGCAATCGACTTCTTGTCAAGGGTGCTTTTGAGAGTTTGCTAGAACGTAGTACATATGTTCAACTTGCCGATGGATCAACTGTTCCGCTTGACGAGTCTTGTAGACAACTATTGTTGTTGAAGCAATTGGAGATGAGCTCAAAGGGTCTGCGGTGCTTGGGCTTGGCATATAAAGATGACTTAGGTGAGCTTTCTGGATACTATGCTGCGACTCATCCTGCCCACAAGAAGCTGCTTGATCCATCCTGCTACTCCTCCATAGAAAGTGATCTAGTTTTTGTGGGAGTTGTTGGTCTAAGGGACCCCCCACGTGAGGAAGTTCACAGGGCAGTAAATGACTGCAGAAGAGCTGGGATCAAAATCATGGTTATAACTGGAGACAATAAATCCACAGCTGAGGCCGTTTGCAGGGAAATTCAGTTGTTTTCTAATGGTGAGAATCTTAGGGGAAGTAGTTTTACTGGCAAAGAATTCATGGCATTTTCCTCTCAGCAACAAATTGAGATATTGTCACAAGATGGAGGCAAGGTCTTTTCTCGTGCTGAACCCAGGCACAAACAAGAAATTGTAAGGATGCTGAAGGAGATGGGTGAAATAGTTGCAATGACTGGAGATGGTGTCAATGATGCACCTGCACTAAAACTTGCTGACATTGGAATAGCCATGGGTATTACAGGAACTGAGGTTGCAAAAGAAGCTTCTGATATGGTTCTGGCGGATGACAATTTCAGTACTATAGTCTCTGCTGTTGCAGAGGGACGTTCGATCTACAATAACATGAAGGCCTTCATCAGATATATGATATCATCTAACGTCGGTGAAGTCATCTCCATTTTCTTGACTGCTGTTTTGGGCATACCAGAATGTTTGATACCTGTGCAGTTGCTCTGGGTAAATTTGGTAACAGATGGCCCACCTGCTACAGCTCTCGGATTTAACCCTGCTGATGTTGACATAATGCAGAAACCACCTAGGAAGAACACTGATGCTCTCATAAACTCCTGGGTTTTCTTCCGCTATATGGTCATTGGTTCTTACGTGGGCATTGCAACTGTCGGTATATTTATAGTGTGGTACACCCAGGCTTCTTTCCTTGGTATTAATATTGTGAGTGATGGCCACACGCTTGTTGAACTATCACAGCTTCGCAACTGGGGTGAATGCTCAACATGGACAAATTTTACCGTGAGTCCATTCAAGGCTGGTAATCGCCTGATTACCTTTTCTGACCCTTGTGAGTATTTTACTGTTGGTAAAGTGAAGGCCATGACACTGTCACTCTCTGTCCTGGTGGCAATTGAGATGTTTAATTCTCTCAATGCCCTATCTGAAGACAACAGCTTGATCAAAATGCCACCTTGGAGAAATCCTTGGCTTCTTGTTGCAATGTCACTCTCGTTTGCCCTACATAGCGTGATACTCTATGTTCCTTTCCTAGCAGATATATTTGGTATTGTCCCACTAAGCCTTTATGAATGGCTTCTAGTCATCTTGCTTTCTGCACCTGTTATTCTTATTGATGAAGTCCTCAAGTTTGTCGGCAGGAGAAGAAGAAGAACTAAACTAAAAGCTGCATAATGTATTCTTCTAGGATATGCTCGATTTTACTATTGATTAAAAGGAGGTTTGATTAAATGTATATTGTTCAGAAATGAAAAATCTATTTCGGGTTATAGTTTTTGAGGAACTTGGAGGCTAGCTATATAGCTTTTGATCACATGCCTTGGAAGGCTGCTTGTTAACATAAAATCCAAGGTTCCTGAAGCAAAACCTGTTGTTTTTTTCCCCGATCCTTTCTAGGAGGGGTTTCATGTATTATAAGTTCTAGTTTGTATTATTCATTTATTGAATCTGCTATCTTACCGTAGATTTTGATGAACTTAAAACACACCTTTTTCTAAATTTGGTGCTTGAAGTTATATATCCTCAATGAGTGTTATTGTTGCTGTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g096190.2.1SL2.50ch01:87286061..872905251,049+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g096190.2SL2.50ch01:87285030..872908975,868+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g096190.2.1.1SL2.50ch01:87285030..872875292,500+n/a
exonexon:Solyc01g096190.2.1.2SL2.50ch01:87287611..87287732122+n/a
exonexon:Solyc01g096190.2.1.3SL2.50ch01:87288333..87288611279+2
exonexon:Solyc01g096190.2.1.4SL2.50ch01:87288702..87289085384+n/a
exonexon:Solyc01g096190.2.1.5SL2.50ch01:87289372..87289481110+n/a
exonexon:Solyc01g096190.2.1.6SL2.50ch01:87289578..87289806229+n/a
exonexon:Solyc01g096190.2.1.7SL2.50ch01:87289971..87290897927+1
intronintron:Solyc01g096190.2.1.1SL2.50ch01:87287530..87287610n/a+n/a
intronintron:Solyc01g096190.2.1.2SL2.50ch01:87287733..87288332n/a+n/a
intronintron:Solyc01g096190.2.1.3SL2.50ch01:87288612..87288701n/a+n/a
intronintron:Solyc01g096190.2.1.4SL2.50ch01:87289086..87289371n/a+n/a
intronintron:Solyc01g096190.2.1.5SL2.50ch01:87289482..87289577n/a+n/a
intronintron:Solyc01g096190.2.1.6SL2.50ch01:87289807..87289970n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17693865%2Fdetails feature 17693865
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