Solanum lycopersicum mRNA Solyc01g096610.2.1

mRNA details  
Name
Solyc01g096610.2.1
Type
mRNA
Length
1,048
Organism
Solanum lycopersicum
Description
UPF0468 protein C16orf80 homolog (AHRD V1 ***- C1BNI4_9MAXI); contains Interpro domain(s) IPR007714 Protein of unknown function DUF667
Location(s)
SL2.50ch01:87682644..87686756
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
4113
Nb exon
7
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g096610.2.1 UPF0468 protein C16orf80 homolog (AHRD V1 ***- C1BNI4_9MAXI); contains Interpro domain(s) IPR007714 Protein of unknown function DUF667

ATGACAATCTATTCACATCCTCAATTTTATCATTTGATATTGAAATTCTCTTTGTTGTACAATTTTTTTAGGAACCCTTATTTTCCTCCCGCAACCGGTCCCGTTTCTTCATTGAAGAATTTGACTCCGATGTTTAAGAACACGTTTCAATCCGGGTTTCTTTCCATTTTGTACAGCCTTGGGAGCAAGCCTCTGCAGATTTGGGATAAAGAAGTTGTTGATGGACATGTCAAACGGCTGCAAGATGAAGATATCCAATCCAATGTCCTGGAAATTATTGGGTCGAATGTCCAGCAAGCATATATAACGTGTCCTGCAGATCCTAATGCAACTCTTGGCATAAAGTTGCCCTTCTTAGTCATGATAGTGAAGAATGTGAAGAAGTACTTCACATTCGAAATTCAGGTTTTAGATGATAAAAATGTCCGGAGAAGATTTCGAGCTTCTAATTATCAAGCGGTAACCCGAGTGAAACCCTATATTTGCACTATGCCCTTGAAATTGGATGAAGGATGGAATCAAATCCAGCTGAACCTTTCTGATTTGACCAGGCGAGCTTATGGAACCAACTATGTTGAAACTCTTCGAGTTCAGGTTCATGCAAATTGCAGGCTAAGGAGGATATACTTTTCTGACCGTCTGTATTCAGAGGAGGAACTCCCACCAGAATTCAAACTTTACCTTCCAATGCAGAAATCTTGAAGATCTTCTCTTAAAACCAGCAGACGAGGCGCTTTGGTTGTCGACATTCGCCTGCAGACTGGTATATCAATCTTGGAGTGAAACATTTTCATCTTTTGGAAATGTTGATTACCCTTGAGTGGGTAGCACCTGGAGTTTATGTTTCTAGAGTAGTTTATTAAAGAGTACTTGTACGATATCTCAATTATTTGTCTTTCACATAACGTTTGAAGTTAGGTATAACGTACACATGGGTAACATGATGAGTGTCATAATTGTCTTTTTATATAAACTGAAGTATATGTTGGAAGTGACGATACATGAATAGACTTCTATCGTCTCTCAAATAATAATGTCCTTTGAAACA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g096610.2.1SL2.50ch01:87682643..87686410234+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g096610.2SL2.50ch01:87682644..876867564,113+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g096610.2.1.1SL2.50ch01:87682644..8768271572+n/a
exonexon:Solyc01g096610.2.1.2SL2.50ch01:87683589..8768363345+n/a
exonexon:Solyc01g096610.2.1.3SL2.50ch01:87683723..8768378765+n/a
exonexon:Solyc01g096610.2.1.4SL2.50ch01:87683864..8768389532+1
exonexon:Solyc01g096610.2.1.5SL2.50ch01:87684945..87685186242+2
exonexon:Solyc01g096610.2.1.6SL2.50ch01:87686069..87686305237+n/a
exonexon:Solyc01g096610.2.1.7SL2.50ch01:87686402..87686756355+n/a
intronintron:Solyc01g096610.2.1.1SL2.50ch01:87682716..87683588n/a+n/a
intronintron:Solyc01g096610.2.1.2SL2.50ch01:87683634..87683722n/a+n/a
intronintron:Solyc01g096610.2.1.3SL2.50ch01:87683788..87683863n/a+n/a
intronintron:Solyc01g096610.2.1.4SL2.50ch01:87683896..87684944n/a+n/a
intronintron:Solyc01g096610.2.1.5SL2.50ch01:87685187..87686068n/a+n/a
intronintron:Solyc01g096610.2.1.6SL2.50ch01:87686306..87686401n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17694389%2Fdetails feature 17694389
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