Solanum lycopersicum mRNA Solyc01g097500.2.1
 mRNA details
|
| Name | Type |
Length
2,320
|
Organism |
|
Description
Serine/threonine kinase (AHRD V1 *-** C4QNN2_SCHMA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
|
|
Location(s)
SL2.50ch01:88322033..88333466
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0006468
- Length
- 11434
- Nb exon
- 15
- Sifter term
- GO:0005515
- GO:0004674
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc01g097500.2.1 Serine/threonine kinase (AHRD V1 *-** C4QNN2_SCHMA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
AAGAGCAAGAACACTCACTTCTTCCTCCTCATCTTCTTCTTCTTCTTCTGCCTCTACTGCTCTTCTGACCAAAGGCTACGGACGACGTCGTTTTCACATCTCGTTTGCCCTATGTATTCTTCAATGTAGCTCGTGATCCATCAAAGCTTCACGTTTCTGCAACGGGATTGGTGCAAGTTGAAGTTTGAACTTTGAAAAGAAAGTCAGTTACGGGCTCAATGGAGCAGTATGAAATATTGGAGCAAATTGGCAAAGGGGCTTTTGGCTCTGCGGTTCTTGTGAAGCATAAGCTTGAAAAGAAGAAGTATGTACTGAAAAAAATTCGTCTCGCTCGGCAAACGGATAGGACTCGCCGAAATGCACACCAGGAGATGGCCCTTATTTCGAGTATGCAAAATCCATTCATTGTGGAGTACAAAGACTCATGGGTGGAGAAGGGTTGCTATGTGTGCATAGTCATAGGTTATTGCGAAGGTGGAGACATGGCAGAGGCCATAAAAAAAGCAAAGGGTGTCCATTTTCTTGAAGAGAAACTATGCAAGTGGCTTGTTCAACTCTTAATGGCTCTTGACTACTTGCACACGAATCATATCCTTCATCGTGATGTCAAGTGCTCGAATATATTTCTAACTAGAGAGCAGGATATTCGTCTAGGTGATTTTGGACTTGCCAAGATGTTGACTTCAGATGACCTTGCTTCCTCGATTGTTGGAACCCCCAGTTACATGTGCCCTGAGCTTCTTGCCGACATACCTTATGGATCTAAGTCAGATATATGGTCTCTAGGATGCTGTATATATGAAATGGCTGCATTTAAGCCAGCATTCAAGGCATTTGATATGCAAGCACTCATCAACAAAATAAACAAGTCTATTGTGGCACCACTTCCGACAAAATACTCTGGTCCATTCCGAGGTCTTGTCAAAAGCATGCTGCGGAAAAACCCAGAACTGAGGCCAAGCGCAGCAGAACTTCTTAGGAATCCACTTCTTCAGCCATATGTGATTAATACACATCTCAAACTTAATGGCCCTAGACGGAACAGTTTACCTGCTTGTTTGCCTGATAATGATGTAAAGAAAACCAGATTTGCAATTTCTGAAAGCACACCTGTCAAAAAGAACAGAGAGAAGCGAATGTCATGTGGAAATGATAGGACTTTGAATCCTAGTGTCTCTGATCACGATTATACTTTTTCAAATCGTAGATATCCAAAAACACCAAGCAGAGTATCTGAATTGTCTGTTGGAAGCCCTGATAGAGGATCAACTGTCACAAAAAAAATCACTTCTAAAGCTTTGCTTGTGAATAAGAATCCAAAGGTGATCGTGCCAAAATTGACTACTACTCCAAGAAGACAAGTGGATCTAAGGAACAGCGATATGGCTTCACGAACCCTGGTGAAGAGATCTGTTTCTACAACTCGTAGGGCATCTTTGCCATTGACAAACAAGGCAGCAGTTCAAGAATTACCTCGAAGGCCGAGTCTCAGTTTTCTTGACTGTATTAAGTCTCCTGATGTTTCTGTCAATGCCCCTCGAATTGACAAGATGCTTGAGTTTCCATTAGCTTCATATGAAGATCCTTTCCATCCTATACGCCGAACATCATCAAACTCTGCGCAAGGTTCCTCTGGCTCACCACAAGCTGAGTATTCAGTTATGAAAGACAAATGTACCATACAGATTCCTGACAGTAAATTTGATCGAATGAGTTCCAATGATGCTTGGCAAGGTTATGAAGGCCCCATGGTGCATGTGGATAGAGAGGACATAACTGATTCTTCTGATCAAAATGCCACTGCTGGTGCATCTAGCCGAACTTCATCTGACACAAGACGCCGCCGTTTTAACATGTCATCTTATAAGCAACGGGCTGAAGCCCTGGAGGGACTACTTGAGTTCAGTGCTAGACTCTTGCAAGAAGACAGATTCGATGAACTTGGTGTCTTATTGAAGCCATTTGGACCAGAAAAAGTTTCTCCGAGGGAAACTGCTATTTGGTTGACCAAGAGCATAAAGGAAAATGCTCCTAAACAGGAAGATTAGTTCTAAGAACATTCAATGTGTATAAAGTAGTCTTTGCTGTAATATTTTCTGTAGGTGCCCAGATTTTGCTAAGTAGAGGCAGTCATAAGCTGAAACATTAATTCATAGCTAGGATCTCCTGTTACCCTTACCCCTTGCATATTTAGCAAATTCACGAAGTACTGAAAGGATAATATGGACGAGAAAACAGGTTCTTTAATTCCACTAGAAATATTATTGCTTATGGATGGTCCCAATGTTAGCATCTATTTTTGCCGAATTAGAGAGTGCTT
AAGAGCAAGAACACTCACTTCTTCCTCCTCATCTTCTTCTTCTTCTTCTGCCTCTACTGCTCTTCTGACCAAAGGCTACGGACGACGTCGTTTTCACATCTCGTTTGCCCTATGTATTCTTCAATGTAGCTCGTGATCCATCAAAGCTTCACGTTTCTGCAACGGGATTGGTGCAAGTTGAAGTTTGAACTTTGAAAAGAAAGTCAGTTACGGGCTCAATGGAGCAGTATGAAATATTGGAGCAAATTGGCAAAGGGGCTTTTGGCTCTGCGGTTCTTGTGAAGCATAAGCTTGAAAAGAAGAAGTATGTACTGAAAAAAATTCGTCTCGCTCGGCAAACGGATAGGACTCGCCGAAATGCACACCAGGAGATGGCCCTTATTTCGAGTATGCAAAATCCATTCATTGTGGAGTACAAAGACTCATGGGTGGAGAAGGGTTGCTATGTGTGCATAGTCATAGGTTATTGCGAAGGTGGAGACATGGCAGAGGCCATAAAAAAAGCAAAGGGTGTCCATTTTCTTGAAGAGAAACTATGCAAGTGGCTTGTTCAACTCTTAATGGCTCTTGACTACTTGCACACGAATCATATCCTTCATCGTGATGTCAAGTGCTCGAATATATTTCTAACTAGAGAGCAGGATATTCGTCTAGGTGATTTTGGACTTGCCAAGATGTTGACTTCAGATGACCTTGCTTCCTCGATTGTTGGAACCCCCAGTTACATGTGCCCTGAGCTTCTTGCCGACATACCTTATGGATCTAAGTCAGATATATGGTCTCTAGGATGCTGTATATATGAAATGGCTGCATTTAAGCCAGCATTCAAGGCATTTGATATGCAAGCACTCATCAACAAAATAAACAAGTCTATTGTGGCACCACTTCCGACAAAATACTCTGGTCCATTCCGAGGTCTTGTCAAAAGCATGCTGCGGAAAAACCCAGAACTGAGGCCAAGCGCAGCAGAACTTCTTAGGAATCCACTTCTTCAGCCATATGTGATTAATACACATCTCAAACTTAATGGCCCTAGACGGAACAGTTTACCTGCTTGTTTGCCTGATAATGATGTAAAGAAAACCAGATTTGCAATTTCTGAAAGCACACCTGTCAAAAAGAACAGAGAGAAGCGAATGTCATGTGGAAATGATAGGACTTTGAATCCTAGTGTCTCTGATCACGATTATACTTTTTCAAATCGTAGATATCCAAAAACACCAAGCAGAGTATCTGAATTGTCTGTTGGAAGCCCTGATAGAGGATCAACTGTCACAAAAAAAATCACTTCTAAAGCTTTGCTTGTGAATAAGAATCCAAAGGTGATCGTGCCAAAATTGACTACTACTCCAAGAAGACAAGTGGATCTAAGGAACAGCGATATGGCTTCACGAACCCTGGTGAAGAGATCTGTTTCTACAACTCGTAGGGCATCTTTGCCATTGACAAACAAGGCAGCAGTTCAAGAATTACCTCGAAGGCCGAGTCTCAGTTTTCTTGACTGTATTAAGTCTCCTGATGTTTCTGTCAATGCCCCTCGAATTGACAAGATGCTTGAGTTTCCATTAGCTTCATATGAAGATCCTTTCCATCCTATACGCCGAACATCATCAAACTCTGCGCAAGGTTCCTCTGGCTCACCACAAGCTGAGTATTCAGTTATGAAAGACAAATGTACCATACAGATTCCTGACAGTAAATTTGATCGAATGAGTTCCAATGATGCTTGGCAAGGTTATGAAGGCCCCATGGTGCATGTGGATAGAGAGGACATAACTGATTCTTCTGATCAAAATGCCACTGCTGGTGCATCTAGCCGAACTTCATCTGACACAAGACGCCGCCGTTTTAACATGTCATCTTATAAGCAACGGGCTGAAGCCCTGGAGGGACTACTTGAGTTCAGTGCTAGACTCTTGCAAGAAGACAGATTCGATGAACTTGGTGTCTTATTGAAGCCATTTGGACCAGAAAAAGTTTCTCCGAGGGAAACTGCTATTTGGTTGACCAAGAGCATAAAGGAAAATGCTCCTAAACAGGAAGATTAGTTCTAAGAACATTCAATGTGTATAAAGTAGTCTTTGCTGTAATATTTTCTGTAGGTGCCCAGATTTTGCTAAGTAGAGGCAGTCATAAGCTGAAACATTAATTCATAGCTAGGATCTCCTGTTACCCTTACCCCTTGCATATTTAGCAAATTCACGAAGTACTGAAAGGATAATATGGACGAGAAAACAGGTTCTTTAATTCCACTAGAAATATTATTGCTTATGGATGGTCCCAATGTTAGCATCTATTTTTGCCGAATTAGAGAGTGCTT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc01g097500.2.1 | SL2.50ch01:88322304..88332119 | 610 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc01g097500.2 | SL2.50ch01:88322033..88333466 | 11,434 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc01g097500.2.1.1 | SL2.50ch01:88333308..88333466 | 159 | - | n/a |
| exon | exon:Solyc01g097500.2.1.10 | SL2.50ch01:88329250..88329331 | 82 | - | 2 |
| exon | exon:Solyc01g097500.2.1.11 | SL2.50ch01:88329066..88329115 | 50 | - | n/a |
| exon | exon:Solyc01g097500.2.1.12 | SL2.50ch01:88327459..88327532 | 74 | - | 1 |
| exon | exon:Solyc01g097500.2.1.13 | SL2.50ch01:88326427..88326478 | 52 | - | n/a |
| exon | exon:Solyc01g097500.2.1.14 | SL2.50ch01:88323806..88324228 | 423 | - | n/a |
| exon | exon:Solyc01g097500.2.1.15 | SL2.50ch01:88322033..88322967 | 935 | - | n/a |
| exon | exon:Solyc01g097500.2.1.2 | SL2.50ch01:88332034..88332178 | 145 | - | 1 |
| exon | exon:Solyc01g097500.2.1.3 | SL2.50ch01:88331791..88331857 | 67 | - | n/a |
| exon | exon:Solyc01g097500.2.1.4 | SL2.50ch01:88331338..88331403 | 66 | - | n/a |
| exon | exon:Solyc01g097500.2.1.5 | SL2.50ch01:88330074..88330120 | 47 | - | 1 |
| exon | exon:Solyc01g097500.2.1.6 | SL2.50ch01:88329901..88329946 | 46 | - | n/a |
| exon | exon:Solyc01g097500.2.1.7 | SL2.50ch01:88329698..88329778 | 81 | - | n/a |
| exon | exon:Solyc01g097500.2.1.8 | SL2.50ch01:88329557..88329599 | 43 | - | 2 |
| exon | exon:Solyc01g097500.2.1.9 | SL2.50ch01:88329419..88329468 | 50 | - | n/a |
| intron | intron:Solyc01g097500.2.1.10 | SL2.50ch01:88329332..88329418 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.11 | SL2.50ch01:88329116..88329249 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.12 | SL2.50ch01:88327533..88329065 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.13 | SL2.50ch01:88326479..88327458 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.14 | SL2.50ch01:88324229..88326426 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.15 | SL2.50ch01:88322968..88323805 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.2 | SL2.50ch01:88332179..88333307 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.3 | SL2.50ch01:88331858..88332033 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.4 | SL2.50ch01:88331404..88331790 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.5 | SL2.50ch01:88330121..88331337 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.6 | SL2.50ch01:88329947..88330073 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.7 | SL2.50ch01:88329779..88329900 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.8 | SL2.50ch01:88329600..88329697 | n/a | - | n/a |
| intron | intron:Solyc01g097500.2.1.9 | SL2.50ch01:88329469..88329556 | n/a | - | n/a |
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