Solanum lycopersicum mRNA Solyc01g097980.2.1

mRNA details  
Name
Solyc01g097980.2.1
Type
mRNA
Length
3,454
Organism
Solanum lycopersicum
Description
Kinase family protein (AHRD V1 *-** D7M4D4_ARALY); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch01:88626253..88636752
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006468
  • GO:0045263
Length
10500
Nb exon
13
Sifter term
GO:0004709
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g097980.2.1 Kinase family protein (AHRD V1 *-** D7M4D4_ARALY); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

TCAATATGAGAGAGAGAGTGTATGAAGACTAACAGTAGTAGCAGTTGATTAGTATATACTGAAAGGAAAAAGTAAAGGTATGATATAGAGAGAGAAACAATGAAACACATTTTCAAGAAGCTTCATCATTCAAATCGATCGAACGATGCTCAATCTACTTCATCAATATCATCGTCATCTTCACCTGCATCATCGTTGTCTTCGGCGTCATGTACTACTGATCATCGGAATTCCAATTCGGTTTCTCAATCACCGTTGAGTCCTTCCACGATTTCAACTGCGTCAACGACGACCACTCCTGCTGCTCCAGTGGGGGCTGGTGGTGGTGGTGGAGGAGGGAATTTATCTACGATCAACAGACAGCAGGACTATTATACTTCGGAGGAAGAGTATCAAGTGCAACTTGCCCTAGCTTTGAGTGTGTCATCCTCCCAGTCTCAAGATCCTTTTCCCTCTGATGTTAATTCAAGCAATGGTCATGGTGTAGGGCGAACCGCTGTTGACTTGGCACGTGATAGAGAGGATGCCGCTGCGGACTTGCTATCGAGGCAGTATTGGGATTATGGTGTGATGGATTATGAGGAGAAAGTTGTTGATGGCTTCTATGATGTATATAATCTCTTTACAGATCCAGCAAGTCGTGGGAAAATGCCATCTCTTTCTGAACTTGAAACAAATCCTGGGACTTCTAACTTTGAAGGCGTGATAATTAATCAGAGAATTGACCCCTCCTTGGAAGAGTTGATGCAGATTGCACACTGTATTACATTGGACTGCCCTGCCAGTGAGATTAGTCTGTTAGTACTGAGGCTTTCTGAACTTGTAACTGGGCATTTAGGTGGCCCAGTAAAGGATGCAAATATCATATTGGCCAAATGGATGGAAATTAGCACTGAGTTGAGGACATCACTTCACACCAGTGTGTTGCCAATCGGATCCCTAAAAATTGGGCTTTCACGTCACCGTGCACTGCTTTTTAAGGTACTAGCTGACCATGTTGGAATACCCTGTAGACTTGTTAAAGGGAGTCACTACACTGGTGTTGAAGATGATGCTGTCAACATTGTGAAGTTACCGAATGATAGCGAGTTTTTGGTTGATCTCATGGGAGCACCAGGCACACTCATACCGGCTGATGTTCTGAGTGCAAAGGATGCTTCTTTTAACAGTCCGAAATTGAACAAGATTCCAAGTTTGCCGTCCAATAGTCATTCTGGAGTTTCCTACCCGAGACGGAACTTGTTATCTGGTCAAAATTCTGTGTTAGGAGATGATTTCTCCGGTAGATCTAAGCCCGAGAAGATAGAATCAGTTCATTCAATCTCTGATGCAGGTGGTAGCTCCACTGCTGGTTCTTCAGGAATCAACAAAAGACCATCTTCTAATCAGGTTGATTGGACTTCACCGTTAGCAATTGGAACTTCTTTGTACAAAGGAGGCCGTGGACCCAATGCCGCTGGTGATGGCTTGAGGTTGAATGTAAATGTTGTTCCTTATGATCAGAATAACCCTGAGGATCCAAAAAATCTTTTTGCTGATCTTAATCCGTTTCAAATAAAAGGCTCTGGCAACACATTACTGCAGAAAAATCCTGCTAGAAACAAAGTCAGTGAGTTGCAACAGCCAATAAATACTTTGATCCCCGGACGGCCTCCTGCCCCTATGATGTGGAAAAATCGATATGCACCCAATGAGGTGCCCCGGAAAAACGAATCTGATTCTGAGGGACTTTTTCCAAAGAAGAACGGTGGATCTAGTGGGTATAATATATCATCAATCGCATCTACCAGCTCAAATATACCGCAGAAGTCTTCTACTGATACCTCCAGGTTACATGGAAATTCACGGCCTGCCTATAGAGGAAATGATGAGGTTGCTTCCACTAGGAATAACAGTTCCATATTATCAGCTGAGCTTGAATTTAGAAGGTTGTCTGTTCAGAACAGTCAAAACAATAATAGAGAAACAAGTCAATGGGAGGGGCACAGTTTGCAGAGTGACGACTTAAATAGGACACAAGCATATGGAGATGATATTATTGTGGAAAGTGATCACACAAGAAATTTGCAAGCTCAGTCAATAGGAACCAATATTAAATTGAAGGAGCCAGAAAATCCAACTTCTTCAGGGAATCTAGGTCCAAGTCAGGTTGATCCTGTGTTTGATGATGTTGGTGATTGTGAGATTCCATGGGAAGATCTTGTCATTGGCGAGAGGATTGGTCTTGGTTCCTATGGAGAGGTTTACCATGCAGATTGGAATGGCACTGAGGTTGCTGTAAAGAAGTTCCTCGATCAGGATTTCTCAGGTGCAGCGTTGGCTGAGTTTAAGAGAGAGGTGCGCATCATGCGTCGATTACGACATCCAAATGTTGTTCGTTTTATGGGTGCTATAACTCGGCCGCCCCACCTTTCTATTATCACTGAATTCCTACCACGAGGTAGCTTATATCGGATAATTCATCGTCCTCATTTTCAAATTGATGAAAGGCAGAGAATCAAAATGGCCCTTGATGTGGCAAAGGGCATGGATTGCTTACATACAAGCAACCCTACAATTGTTCACCGTGATCTGAAGTCACCTAATCTTTTGGTTGATACGGACTGGAATGTTAAGGTATGTGATTTTGGCTTGTCTCGGTTGAAGCACAACACATTTTTGTCTTCCAAATCAACAGCTGGAACGCCTGAGTGGATGGCACCAGAAGTTCTCCGCAATGAACCTTCGAATGAGAAGTGTGACATATACAGTTTTGGTGTCATTCTATGGGAACTTGCTACCTTAAGATTACCTTGGAGTGGAATGAATCCTATGCAAGTGGTGGGAGCTGTTGGCTTCCAGAATAAACGCCTTGAAATTCCCAAGGAACTTGATCCTATAGTAGCAAGAATAATATGGGAATGTTGGCAAACCGATCCAAACTTGCGTCCATCATTTGCACAGCTAACTGTGGCTTTAACACCATTGCAACGACTTGTCATTCCTGCCTATGTAGATCAGCTGAACTCCCGCTTGCCTCAGGAAATCTCAGTAAATTCTACCCCGTAAATTTCCTCGTCTTCCTCAAGTGCTGATCACTTGGGAAAAAGAAGGTTTCTGGTTTCGCTCATTTGCAAAAATGGAAAGATTCTTGGCGAAGTGGGTAAATGGTTCTTGTTGCTCAGAGATGATTTAGGAAGAAAAAGCAAAAGCAACCTTGGTAGTGGTCCTTAAATGTGTTGTTACTTGTATAGTGGTTGTGTATAAGTTGATCCCAAAGGGAACGGGTGTCTTTCTGAGTTGTATAGTCTTAATGATCATAAATTCGTTGGTTGAAAAACCCCCCTTCGAAATAATGGGGTGGTGCCGCACATAATCCCTGTATAGTCTATACAACAGAAGCTAAGTTGTCTCTTATAATGAATATATATGGTTGCCTTCAAAAACAGTACTACAATATCTCACGTATTATGCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g097980.2.1SL2.50ch01:88626351..88636346983+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g097980.2SL2.50ch01:88626253..8863675210,500+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g097980.2.1.1SL2.50ch01:88626253..88626810558+n/a
exonexon:Solyc01g097980.2.1.10SL2.50ch01:88635377..8863544569+n/a
exonexon:Solyc01g097980.2.1.11SL2.50ch01:88635570..8863561950+n/a
exonexon:Solyc01g097980.2.1.12SL2.50ch01:88635953..88636129177+n/a
exonexon:Solyc01g097980.2.1.13SL2.50ch01:88636211..88636752542+1
exonexon:Solyc01g097980.2.1.2SL2.50ch01:88627877..88628299423+n/a
exonexon:Solyc01g097980.2.1.3SL2.50ch01:88629148..88629251104+n/a
exonexon:Solyc01g097980.2.1.4SL2.50ch01:88629479..886306201,142+n/a
exonexon:Solyc01g097980.2.1.5SL2.50ch01:88631233..8863127341+1
exonexon:Solyc01g097980.2.1.6SL2.50ch01:88631564..8863163269+2
exonexon:Solyc01g097980.2.1.7SL2.50ch01:88633628..88633728101+n/a
exonexon:Solyc01g097980.2.1.8SL2.50ch01:88634553..8863463179+n/a
exonexon:Solyc01g097980.2.1.9SL2.50ch01:88634736..8863483499+1
intronintron:Solyc01g097980.2.1.1SL2.50ch01:88626811..88627876n/a+n/a
intronintron:Solyc01g097980.2.1.10SL2.50ch01:88635446..88635569n/a+n/a
intronintron:Solyc01g097980.2.1.11SL2.50ch01:88635620..88635952n/a+n/a
intronintron:Solyc01g097980.2.1.12SL2.50ch01:88636130..88636210n/a+n/a
intronintron:Solyc01g097980.2.1.2SL2.50ch01:88628300..88629147n/a+n/a
intronintron:Solyc01g097980.2.1.3SL2.50ch01:88629252..88629478n/a+n/a
intronintron:Solyc01g097980.2.1.4SL2.50ch01:88630621..88631232n/a+n/a
intronintron:Solyc01g097980.2.1.5SL2.50ch01:88631274..88631563n/a+n/a
intronintron:Solyc01g097980.2.1.6SL2.50ch01:88631633..88633627n/a+n/a
intronintron:Solyc01g097980.2.1.7SL2.50ch01:88633729..88634552n/a+n/a
intronintron:Solyc01g097980.2.1.8SL2.50ch01:88634632..88634735n/a+n/a
intronintron:Solyc01g097980.2.1.9SL2.50ch01:88634835..88635376n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17696144%2Fdetails feature 17696144
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