Solanum lycopersicum mRNA Solyc01g098560.2.1
 mRNA details
|
| Name | Type |
Length
1,771
|
Organism |
|
Description
Glucose transporter 8 (AHRD V1 ***- Q2KKJ3_SOLIN); contains Interpro domain(s) IPR003663 Sugar/inositol transporter
|
|
Location(s)
SL2.50ch01:89047304..89051297
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0016020
- GO:0016021
- Length
- 3994
- Nb exon
- 18
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc01g098560.2.1 Glucose transporter 8 (AHRD V1 ***- Q2KKJ3_SOLIN); contains Interpro domain(s) IPR003663 Sugar/inositol transporter
TATGGAAAGAGTGACTAAGCAAATCTTGGACAATAACTGACGTTTGATATATATTGTATCCGTGAAGATGAACACAACCAAAGAGAGCAGCTGTACTTTTATATAGGATGATTCATCTTGACAAAAAAAATCAAAATAATATATTTTTTGAGAAATTAAACTTAGTTTAGTTAAGTATAAGGTTAATTCGATGGAGAGGCCAGAAAGAATAGAAGATGGATTTACAACCACTGATCCTTTGCTTTCTACTGGTGGTGATACTCCGGCGCCGCCCACACTCGCCGTCGTATTCAGCACCTTGGTTGCCGTCTCCGGCTCCTTTGTTTTTGGTTCTGCGGTGGGATTTTCTTCACCCGCTCAGAATGGGATAATAAAGGATCTTGGCCTCTCTGTGGCAGAGTACTCTGTATTTGGTTCAATATGGACAATTGGAGCGATGATAGGTGCTGTAATGAGTGGGAAACTAGCTGATCTTTTCGCCCGTAGAGGTGCAATGGGCTTCTCTGAGTTGTTTTGTCTTTTGGGATGGCTTGCAATTATTTTTGGCAAGGATGCTTTGTGGCTTGACATTGGGAGGTTTTTAATGGGATATGGAGTTGGCATTATTTCTTATGTGGTACCTGTATATATAGCGGAAATAACACCTAAGAATCTCCGAGGCGCATTCACAACTGTTAATCAGCTAATGATATGCTGTGGAGTATCACTTATGTATGTTGTTGGAGTAATCATCAACTGGCGTCTATTGGCTGTGATTGGAGCTATTCCCTGTATAATACAGCTTTTGGGCCTGTTTTTCATACCGGAGTCTCCGAGATGGTTGGCTAAGGCTGGCCAGTGGAAAGAGTGTGAAGCTTCTCTTCAGCGCCTTAGGGGGAAAGACGCCAATATATCAGAAGAAGCTGCTGAAATAAAAGAGTACACAGAAACACTTCAGAAACTTTCTGAGGCTAAGCTAATTGATTTGTTCCACAAGAAATATGCACATTCTCTTATAGTTGGAGTGGGATTAATGGTATTGCAACAATTTGGAGGGGTGAATGCTATTGCATATTATGCAAGTTCTATTTTTGAGTCAGCTGGTTTTTCTGGTAGGGTTGGTTCAATTGCAATGGTAGTTGTACAGATCCCAATGCAAGTTTTAGGAGTACTGTTGATGGATAAATCAGGAAGGCGTCCACTACTTATGGTATCTGCTGCAGGGACATGCTTGGGTTGTTTCCTTGTAGGATCGTCATTCTTACTACAGGATCTTCAACTTTGGAAGTCTAGCCCCTTTTTGGCACTTGTTGGCATACTGGTCTTTACTGGATCGTTCTCATTAGGCATGGGAGGTATACCGTGGGTAATTATGTCTGAGATATTTCCCATAAATGTCAAAGGTTTAGCTGGAAGCTTAGTGACAGTAATCAACTGGTTTGGTTCTTGGATCGTCTCATATTCGTTCAACTTTCTTATGCTATGGAGCTCTGAAGGAACATTCTTCATATTTTCAGCAGTCTGTGGTGTAACTGTTATGTTTGTGGCAAAGCTGGTTCCAGAGACCAAAGGCCGTACCTTGGAAGAAATACAATCCTCCATGACATGACCAATGAATTCTAATGATTTATTATGTAAGAAACTGAGGGTCTTTGGATCGGCTTAAAAGATGGTCAAACCTATTTAAAGTCAGTTTTATATTATCAGTATCCGATCGACATACATAATAAACATCTCTTCATACAGAAAACCTAATACTATAAGCCCCGAATGTTTTAAATATAATAAGCGG
TATGGAAAGAGTGACTAAGCAAATCTTGGACAATAACTGACGTTTGATATATATTGTATCCGTGAAGATGAACACAACCAAAGAGAGCAGCTGTACTTTTATATAGGATGATTCATCTTGACAAAAAAAATCAAAATAATATATTTTTTGAGAAATTAAACTTAGTTTAGTTAAGTATAAGGTTAATTCGATGGAGAGGCCAGAAAGAATAGAAGATGGATTTACAACCACTGATCCTTTGCTTTCTACTGGTGGTGATACTCCGGCGCCGCCCACACTCGCCGTCGTATTCAGCACCTTGGTTGCCGTCTCCGGCTCCTTTGTTTTTGGTTCTGCGGTGGGATTTTCTTCACCCGCTCAGAATGGGATAATAAAGGATCTTGGCCTCTCTGTGGCAGAGTACTCTGTATTTGGTTCAATATGGACAATTGGAGCGATGATAGGTGCTGTAATGAGTGGGAAACTAGCTGATCTTTTCGCCCGTAGAGGTGCAATGGGCTTCTCTGAGTTGTTTTGTCTTTTGGGATGGCTTGCAATTATTTTTGGCAAGGATGCTTTGTGGCTTGACATTGGGAGGTTTTTAATGGGATATGGAGTTGGCATTATTTCTTATGTGGTACCTGTATATATAGCGGAAATAACACCTAAGAATCTCCGAGGCGCATTCACAACTGTTAATCAGCTAATGATATGCTGTGGAGTATCACTTATGTATGTTGTTGGAGTAATCATCAACTGGCGTCTATTGGCTGTGATTGGAGCTATTCCCTGTATAATACAGCTTTTGGGCCTGTTTTTCATACCGGAGTCTCCGAGATGGTTGGCTAAGGCTGGCCAGTGGAAAGAGTGTGAAGCTTCTCTTCAGCGCCTTAGGGGGAAAGACGCCAATATATCAGAAGAAGCTGCTGAAATAAAAGAGTACACAGAAACACTTCAGAAACTTTCTGAGGCTAAGCTAATTGATTTGTTCCACAAGAAATATGCACATTCTCTTATAGTTGGAGTGGGATTAATGGTATTGCAACAATTTGGAGGGGTGAATGCTATTGCATATTATGCAAGTTCTATTTTTGAGTCAGCTGGTTTTTCTGGTAGGGTTGGTTCAATTGCAATGGTAGTTGTACAGATCCCAATGCAAGTTTTAGGAGTACTGTTGATGGATAAATCAGGAAGGCGTCCACTACTTATGGTATCTGCTGCAGGGACATGCTTGGGTTGTTTCCTTGTAGGATCGTCATTCTTACTACAGGATCTTCAACTTTGGAAGTCTAGCCCCTTTTTGGCACTTGTTGGCATACTGGTCTTTACTGGATCGTTCTCATTAGGCATGGGAGGTATACCGTGGGTAATTATGTCTGAGATATTTCCCATAAATGTCAAAGGTTTAGCTGGAAGCTTAGTGACAGTAATCAACTGGTTTGGTTCTTGGATCGTCTCATATTCGTTCAACTTTCTTATGCTATGGAGCTCTGAAGGAACATTCTTCATATTTTCAGCAGTCTGTGGTGTAACTGTTATGTTTGTGGCAAAGCTGGTTCCAGAGACCAAAGGCCGTACCTTGGAAGAAATACAATCCTCCATGACATGACCAATGAATTCTAATGATTTATTATGTAAGAAACTGAGGGTCTTTGGATCGGCTTAAAAGATGGTCAAACCTATTTAAAGTCAGTTTTATATTATCAGTATCCGATCGACATACATAATAAACATCTCTTCATACAGAAAACCTAATACTATAAGCCCCGAATGTTTTAAATATAATAAGCGG
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc01g098560.2.1 | SL2.50ch01:89047493..89051114 | 466 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc01g098560.2 | SL2.50ch01:89047304..89051297 | 3,994 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc01g098560.2.1.1 | SL2.50ch01:89047304..89047640 | 337 | + | n/a |
| exon | exon:Solyc01g098560.2.1.10 | SL2.50ch01:89049506..89049586 | 81 | + | n/a |
| exon | exon:Solyc01g098560.2.1.11 | SL2.50ch01:89049687..89049771 | 85 | + | n/a |
| exon | exon:Solyc01g098560.2.1.12 | SL2.50ch01:89049866..89049909 | 44 | + | n/a |
| exon | exon:Solyc01g098560.2.1.13 | SL2.50ch01:89049983..89050045 | 63 | + | 2 |
| exon | exon:Solyc01g098560.2.1.14 | SL2.50ch01:89050130..89050189 | 60 | + | n/a |
| exon | exon:Solyc01g098560.2.1.15 | SL2.50ch01:89050268..89050318 | 51 | + | n/a |
| exon | exon:Solyc01g098560.2.1.16 | SL2.50ch01:89050638..89050697 | 60 | + | n/a |
| exon | exon:Solyc01g098560.2.1.17 | SL2.50ch01:89050780..89050894 | 115 | + | n/a |
| exon | exon:Solyc01g098560.2.1.18 | SL2.50ch01:89051002..89051297 | 296 | + | n/a |
| exon | exon:Solyc01g098560.2.1.2 | SL2.50ch01:89048116..89048178 | 63 | + | n/a |
| exon | exon:Solyc01g098560.2.1.3 | SL2.50ch01:89048344..89048433 | 90 | + | n/a |
| exon | exon:Solyc01g098560.2.1.4 | SL2.50ch01:89048509..89048568 | 60 | + | n/a |
| exon | exon:Solyc01g098560.2.1.5 | SL2.50ch01:89048663..89048728 | 66 | + | n/a |
| exon | exon:Solyc01g098560.2.1.6 | SL2.50ch01:89048811..89048876 | 66 | + | n/a |
| exon | exon:Solyc01g098560.2.1.7 | SL2.50ch01:89048954..89049029 | 76 | + | n/a |
| exon | exon:Solyc01g098560.2.1.8 | SL2.50ch01:89049112..89049176 | 65 | + | n/a |
| exon | exon:Solyc01g098560.2.1.9 | SL2.50ch01:89049291..89049383 | 93 | + | 2 |
| intron | intron:Solyc01g098560.2.1.1 | SL2.50ch01:89047641..89048115 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.10 | SL2.50ch01:89049587..89049686 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.11 | SL2.50ch01:89049772..89049865 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.12 | SL2.50ch01:89049910..89049982 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.13 | SL2.50ch01:89050046..89050129 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.14 | SL2.50ch01:89050190..89050267 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.15 | SL2.50ch01:89050319..89050637 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.16 | SL2.50ch01:89050698..89050779 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.17 | SL2.50ch01:89050895..89051001 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.2 | SL2.50ch01:89048179..89048343 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.3 | SL2.50ch01:89048434..89048508 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.4 | SL2.50ch01:89048569..89048662 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.5 | SL2.50ch01:89048729..89048810 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.6 | SL2.50ch01:89048877..89048953 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.7 | SL2.50ch01:89049030..89049111 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.8 | SL2.50ch01:89049177..89049290 | n/a | + | n/a |
| intron | intron:Solyc01g098560.2.1.9 | SL2.50ch01:89049384..89049505 | n/a | + | n/a |
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