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Solanum lycopersicum mRNA Solyc01g098980.2.1

mRNA details  
Name
Solyc01g098980.2.1
Type
mRNA
Length
4,991
Organism
Solanum lycopersicum
Description
Kinesin (AHRD V1 *-*- A6YTD6_CUCME); contains Interpro domain(s) IPR015748 Mitogen activated protein kinase kinase kinase 3
Location(s)
SL2.50ch01:89328416..89342200
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006468
  • GO:0007018
Length
13785
Nb exon
35
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g098980.2.1 Kinesin (AHRD V1 *-*- A6YTD6_CUCME); contains Interpro domain(s) IPR015748 Mitogen activated protein kinase kinase kinase 3

TCTTCATCTTCCTCTTCACTGATTTCGCACTCACTCATGGACGATCGAACCCTAGAAAAGCTATGTGATACTTTTGATCAAGCAGTTACCATCTCTGGGGATAATTTGATCAAGGCTGAACCAATTCTAAATGGAGGTGAAACCCTGGAATCTTCTCCTACTCTTGATGAAGTGAAAGTTGACAGAACTTCTGATTCAGTGGGTGAGAGTAATGCTTCACATTGTACCGCAGAAGTATGTTCATCATATCAAGAGCAGACTCTTCCACTTCTGGAGAAGATCGAAGCTAGCAACAAAGTGCTCGACTTGGCGAAAGAACAGGAAGCACTTTGTAATGATGTCAAGGAGAGCACGAGTGTGGACTCTTTTTCTGGTTCTGAAGCTTTTAATGCTCTTCAGCATTTGAGTGTTCAACATGAAATTCTAAAAAAGAAGTATGATGAAGAGTGTGAACTACTGAAGCAGAAGTACACGGAGGAGTGTGTTCAACATGAAGTTTTAAAAAAGAAGTACGACCAAGAGTGTGAACTACTGAAGAAGAAGTATCTGGAGGAGTGTACTGAAAGAAAGCGTCTATATAATGAAGTGATCGAACTCAAAGGAAATATCAGGGTCTTCTGTAGATGTAGACCTTTAAATGCAAGTGAAATTGTAGATGGATCAACATCGGTGGTCGAATTTGATCCATCTCATGAAAATGAACTGCAGATCAGTTGTGCAGGTTCCTCTAAAAAGCAGTTTAAGTTTGATTACGTGTTTAAACCTGAGGACAGCCAAGATGCCGTTTTTTCTCAAACAATGCCCATTGTGACCTCTGTTTTGGATGGGTATAATGTCTGCATATTTGCCTATGGACAAACTGGTACAGGGAAGACGTTTACCATGGAAGGGACACCAGAAAATAGGGGAGTCAACTACAGAACTTTAGAGAAGCTATTTAGCTTATCTAGTGAGAGAAGTAGTATCATGAGATATGAATTGTTTGTCAGCATGTTAGAGGTTTATAATGAGAAGATAAAAGATCTCCTGGTAGAGAACTCAAATCAACCGGCTAAGAAGTTGGAGATAAAACAATCTGCAGAAGGAACTCAAGAAGTTCCAGGACTTGTTGAGGCTCGTGTATATGGTACAGATGAAGTATGGGAACTGCTTAAGTCCGGAAGTCGGGCTAGATCTGTTGGATCAACTAGTGCTAATGAACTTAGCAGCCGCTCTCACTGCTTACTGCGGGTGACTGTTGTGGGAGACAATTTGATTAACGGCCAGAGGACTAGGAGCCACCTTTGGCTTGTTGACCTTGCTGGCAGTGAGCGTGTGGGGCGGATAGCAGTTGAAGGCGAGAGGTTGAAAGAGTCACAATTCATAAACAAGTCATTATCTGCACTTGGGGATGTCATTTCTGCACTAGCCTCTAAGACATCTCATATCCCATACAGGAATTCAAAGCTCACACATATGCTGCAGAGCTCTCTAGGGGGAGATTGCAAAGCAGTCATGTTTGTCCAAATCAGCCCTAATAACACAGATTTGGGAGAAACTCTATGTTCGCTGAATTTTGCTAGTCGAGTTCGAGGAGTTGAGCACGGCCCTGCTCGCAAACAGACAGACCCTGCAGAGATCATGAAGCATAAACTACTGGCAGAAAAAGCAAAGCATGATGAGAAGGAAACCAAAAAATTGCAGGACAATTTGCAGTCTCTGCAGCTGAGACTTGCTACGAGAGAACAGACGTGCAGAAGTCTTCAGGATAAGGTTCGTGATTTGGAAAACCAATTGGCAGAGGAGAGGAAAATACGTTTAAAGCAGGAAAGCAAGGCTTTGGCTGGAGCTTCTCGTGATATCACAACCTCGTCATATTTAAGCCAAGCACAGAAGATCACAACTGAGAAGAAACCACCACTGGCTCCTTCAAAAGCACTGAGAATGCCTTTGAGAAAAATCAGCAATTTTGTGCCCCCTCCATCCCCTCCATCCCCTCTTGCTCGTGCTCCTGCAAAAACTAAGAAGTCTTTTGTGCCAGTGGCATCACATAACAAAGAAAATGTAGAGAGAACATCATTGACAAAGGCAGTTTTGAAACCAAGGCGAGGATCTATTATTGCAGTTAGACCACCACCTCAAGGAACAAACCAGGTTTTGCAGCCGAAAAGACGGGCTTCTATTGCAACCCTTCGCCCTGAGTCTAGCATTTCAACTTTCAATAACTCTGCTGCTCGACCAAGGAATGACCGGTTCATTGGTCGGCAATCATTTGTCTGGGATCCACAGAGAATGTGGCGTACATCAAGAATGCTTTCTCCAATAGCACAGGCAAAGGAATCATCTATTGCAACACCAATAGGGGCAACCCCCATTGGTTCACGAAGCAGTAAATTCATGGGAAGTCCTCCTTCACAAGCACCAGGTTCATGGAGGCCCAAGCATCCAACAGTTGTTGCATTAAAGAAGCAATTGGTGTGGAGTCCTCTGAAGAAGGTCGCAAGAAGTAGCAATAGGAAGTCCTTGGCTTACTATCTGCTTAACTCGTTTCGACTAAGATCCTTTAAGGTAAAGCATCTCAGTTTAGACGGAACAGAAAAGTTAGAGATTTTGAAAAATCATATAATTAAAGGGGGCTATTTTGTAATTCCAATTCTTATTCCATTTTTTTTCAAAAAGATGCAAGATATATTCGGATCAGTTAGGCGATCACTGGTGTTTCGAACGCCGAATGCCGACGGTGCAGATGACGGTAATCTAGTTGAGAAGATAAATTCCTGCATCCGGAACTCTAGAGTTTTCTCCAAGCTATCGCCTCCTCCGCGAGCGTTGCCATCACCGACAACCGCCGTTAAAGATGACGGTGATGCGGCTACACTTCCTATCAGATGGAGAAAAGGAGAGATGATAGGATGTGGTGCTTTTGGACAGGTTTATATGGGAATGAATCTCGATTCTGGAGAACTTCTCGCGGTCAAGCAGGTTATGATAGCTGCAAACAGTGCTTCAAAGGAGAAAGCGCAGTCCCACGTTAAGGAGCTTGAGGAGGAAGTCAAGCTTCTCAAGAATCTCTCCCATCCGCATATTGTTAGATATCTTGGAATTGTGAGAGAAGAAGACACATTGAATATTTTGCTGGAATTTGTACCTGGTGGATCAATATCATCCCTTTTAGGAAAATTTGGATCTTTCCCAGAGCCCGTTATAAGATCGTACACTAAGCAATTGCTCCTAGGACTGGATTATCTTCACAAGAATGGAATAATGCATAGAGATATTAAGGGGGCAAATATCCTTGTTGATAACAAAGGTTGCATAAAACTGGCTGACTTTGGGGCATCAAAGAAGGTTGTCGAACTGGCTACTATATCAGGTGCCAAGTCCATGAAGGGCACACCATATTGGATGGCTCCTGAGGTCATTCGCCAAACTGGTCATAGCTTCTCTGCTGATATATGGAGTGTAGGATGTACTGTAATTGAGATGACTACTGGCAAGCCTCCCTGGAGCCAACAGTATCAAGAGGTTGCTGCACTCTTCTATATTGGGACAACAAAAGCTCATCCCCCGATCCCTGAACATGTGTCTGTTGAAGCAAAAGACTTTCTGCTGAAGTGCTTACAGAAGGAACCAGAGTTAAGGCCATCTGCCAGTGAGTTATTACAGCATCCATTTGTCACCGGTGAAGCACAACTGTCTCTTCCTGATGTTTCTAGTTCTATGATGGGCAAATCTGAAGGTCACTCTTATTCAAGTGGGCATAATGCGAAAAGTGTTGCTGGTTCAGTAGACATCTGCAACTTGGGTACCTTGAATATCTCAACGGAAAATACTGATAATTTGTCGGAGGCTAGAAATATGTGGAGAGGAAACAGTAGTGATGATGACATGTGTCAGATTGATGATAATGAAAATTTGCTCTTGGATGGAGGAACAACGTTTAGCTCTGTTAAGATGATGGATGACTTCAATAAGAGTTTCAATCCCATTGCCGAGCCCTCTGATGAATGGAACTGTGATTATGGCATGACTCCTCAATCACGACAAAGAAATACAGATTTAGTTAACAATCAGGAAGGTGCCTTAGGTGCTGGGATCTCAGCCTCACCTAACAACAATTCTGCAGTTTTATGTGGTCCTTCCATCTCAGAAGATGATGATGAGCTTACTGAGTCAAAAATCAGAGCCTTCTTGGACGAAAAGGCTCTTGAACTAAAGAAACTGCAGACACCTCTGTATGAAGAGTTCTACAACAGTTTGAATCCTTCATACTCCTCTCCTCAAGTTGAGGCTACAATTGATGAAACTACACCAAATTACTTAAGGTTACCTCCGAAAAGTAGGTCACCAAGTCGGGGCCCTATTGGAAGCCCGTCTACAGGAATTGATACCATCACTAGTCCAAGCCCTGGTAGTAGCAACAGGCGAACATCATGCATTGGCAGCGGAAGCAATCAAGACTATGATGATGGTTCACCCCAGTCTACTGAGCGGACGCAATCAAATAGTCCCATTGCAAGTTTTAGTGAGATTCAAAGGAAATGGAAGGAAGAGCTTGACCAAGAACTTGAAAGAAAGCGAGAGATGATGCGTCAAGCAGGTGTGGCAGGGAAAACATCTTCTCCCAAAGATCGAGCTTTGAATCGGCAGAGAGAGCGTTCAAGCATGCATTGCTCAAGGAAGAGGTTATTTTTCTCCCTCTTCTATGAAGCATCTTTACTGTATATGTTAACCACACTTGGAGACAAAAAGATATGCAACAAACTAGTCACAGGGTTGATCCATGTGCTGTTGTTTTGCTTCTACCTCACAAGCCGGCAACAAAATGAGACAATCAGCATAGGTATGGCAGATTGTAGCCACCAATATTGTCCTGTTCCACTTCACTGCAAGCATTGGTTTCCGGTTTTATGATTCATTTTCAAGTGAGATGTAATTTGCCTGACAAAAAATTATGGTTGTTGCGAGTGCATTTATGTGAATCTTCTCTTTTGAAATATAAAGTATTCTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g098980.2.1SL2.50ch01:89328513..893421641,619-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g098980.2SL2.50ch01:89328416..8934220013,785-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g098980.2.1.1SL2.50ch01:89342158..8934220043-2
exonexon:Solyc01g098980.2.1.10SL2.50ch01:89338702..89338917216-1
exonexon:Solyc01g098980.2.1.11SL2.50ch01:89338578..8933861538-2
exonexon:Solyc01g098980.2.1.12SL2.50ch01:89338159..89338322164-n/a
exonexon:Solyc01g098980.2.1.13SL2.50ch01:89337961..89338074114-n/a
exonexon:Solyc01g098980.2.1.14SL2.50ch01:89337087..89337838752-1
exonexon:Solyc01g098980.2.1.15SL2.50ch01:89336741..8933681171-2
exonexon:Solyc01g098980.2.1.16SL2.50ch01:89336263..8933634583-n/a
exonexon:Solyc01g098980.2.1.17SL2.50ch01:89335732..89336034303-n/a
exonexon:Solyc01g098980.2.1.18SL2.50ch01:89335556..8933559742-n/a
exonexon:Solyc01g098980.2.1.19SL2.50ch01:89334982..8933504766-n/a
exonexon:Solyc01g098980.2.1.2SL2.50ch01:89341982..8934207493-2
exonexon:Solyc01g098980.2.1.20SL2.50ch01:89334797..89334907111-n/a
exonexon:Solyc01g098980.2.1.21SL2.50ch01:89334624..8933470481-n/a
exonexon:Solyc01g098980.2.1.22SL2.50ch01:89334474..8933455178-n/a
exonexon:Solyc01g098980.2.1.23SL2.50ch01:89334297..8933437983-1
exonexon:Solyc01g098980.2.1.24SL2.50ch01:89333233..8933331482-n/a
exonexon:Solyc01g098980.2.1.25SL2.50ch01:89333016..89333116101-1
exonexon:Solyc01g098980.2.1.26SL2.50ch01:89332616..8933265540-n/a
exonexon:Solyc01g098980.2.1.27SL2.50ch01:89332470..8933252960-n/a
exonexon:Solyc01g098980.2.1.28SL2.50ch01:89332343..8933239250-1
exonexon:Solyc01g098980.2.1.29SL2.50ch01:89331371..89331569199-n/a
exonexon:Solyc01g098980.2.1.3SL2.50ch01:89341846..8934188136-2
exonexon:Solyc01g098980.2.1.30SL2.50ch01:89331045..89331272228-n/a
exonexon:Solyc01g098980.2.1.31SL2.50ch01:89330634..89330944311-1
exonexon:Solyc01g098980.2.1.32SL2.50ch01:89330492..8933055968-2
exonexon:Solyc01g098980.2.1.33SL2.50ch01:89328907..8932898882-1
exonexon:Solyc01g098980.2.1.34SL2.50ch01:89328701..89328865165-1
exonexon:Solyc01g098980.2.1.35SL2.50ch01:89328416..89328598183-n/a
exonexon:Solyc01g098980.2.1.4SL2.50ch01:89341082..89341212131-n/a
exonexon:Solyc01g098980.2.1.5SL2.50ch01:89340895..89340997103-2
exonexon:Solyc01g098980.2.1.6SL2.50ch01:89340737..8934081175-2
exonexon:Solyc01g098980.2.1.7SL2.50ch01:89340354..89340650297-2
exonexon:Solyc01g098980.2.1.8SL2.50ch01:89339970..89340249280-1
exonexon:Solyc01g098980.2.1.9SL2.50ch01:89339037..89339198162-1
intronintron:Solyc01g098980.2.1.10SL2.50ch01:89338918..89339036n/a-n/a
intronintron:Solyc01g098980.2.1.11SL2.50ch01:89338616..89338701n/a-n/a
intronintron:Solyc01g098980.2.1.12SL2.50ch01:89338323..89338577n/a-n/a
intronintron:Solyc01g098980.2.1.13SL2.50ch01:89338075..89338158n/a-n/a
intronintron:Solyc01g098980.2.1.14SL2.50ch01:89337839..89337960n/a-n/a
intronintron:Solyc01g098980.2.1.15SL2.50ch01:89336812..89337086n/a-n/a
intronintron:Solyc01g098980.2.1.16SL2.50ch01:89336346..89336740n/a-n/a
intronintron:Solyc01g098980.2.1.17SL2.50ch01:89336035..89336262n/a-n/a
intronintron:Solyc01g098980.2.1.18SL2.50ch01:89335598..89335731n/a-n/a
intronintron:Solyc01g098980.2.1.19SL2.50ch01:89335048..89335555n/a-n/a
intronintron:Solyc01g098980.2.1.2SL2.50ch01:89342075..89342157n/a-n/a
intronintron:Solyc01g098980.2.1.20SL2.50ch01:89334908..89334981n/a-n/a
intronintron:Solyc01g098980.2.1.21SL2.50ch01:89334705..89334796n/a-n/a
intronintron:Solyc01g098980.2.1.22SL2.50ch01:89334552..89334623n/a-n/a
intronintron:Solyc01g098980.2.1.23SL2.50ch01:89334380..89334473n/a-n/a
intronintron:Solyc01g098980.2.1.24SL2.50ch01:89333315..89334296n/a-n/a
intronintron:Solyc01g098980.2.1.25SL2.50ch01:89333117..89333232n/a-n/a
intronintron:Solyc01g098980.2.1.26SL2.50ch01:89332656..89333015n/a-n/a
intronintron:Solyc01g098980.2.1.27SL2.50ch01:89332530..89332615n/a-n/a
intronintron:Solyc01g098980.2.1.28SL2.50ch01:89332393..89332469n/a-n/a
intronintron:Solyc01g098980.2.1.29SL2.50ch01:89331570..89332342n/a-n/a
intronintron:Solyc01g098980.2.1.3SL2.50ch01:89341882..89341981n/a-n/a
intronintron:Solyc01g098980.2.1.30SL2.50ch01:89331273..89331370n/a-n/a
intronintron:Solyc01g098980.2.1.31SL2.50ch01:89330945..89331044n/a-n/a
intronintron:Solyc01g098980.2.1.32SL2.50ch01:89330560..89330633n/a-n/a
intronintron:Solyc01g098980.2.1.33SL2.50ch01:89328989..89330491n/a-n/a
intronintron:Solyc01g098980.2.1.34SL2.50ch01:89328866..89328906n/a-n/a
intronintron:Solyc01g098980.2.1.35SL2.50ch01:89328599..89328700n/a-n/a
intronintron:Solyc01g098980.2.1.4SL2.50ch01:89341213..89341845n/a-n/a
intronintron:Solyc01g098980.2.1.5SL2.50ch01:89340998..89341081n/a-n/a
intronintron:Solyc01g098980.2.1.6SL2.50ch01:89340812..89340894n/a-n/a
intronintron:Solyc01g098980.2.1.7SL2.50ch01:89340651..89340736n/a-n/a
intronintron:Solyc01g098980.2.1.8SL2.50ch01:89340250..89340353n/a-n/a
intronintron:Solyc01g098980.2.1.9SL2.50ch01:89339199..89339969n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17697382%2Fdetails feature 17697382
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