Solanum lycopersicum mRNA Solyc01g099630.2.1

mRNA details  
Name
Solyc01g099630.2.1
Type
mRNA
Length
1,315
Organism
Solanum lycopersicum
Description
Xyloglucan endotransglucosylase/hydrolase 5 (AHRD V1 **** C0IRG4_ACTDE); contains Interpro domain(s) IPR016455 Xyloglucan endotransglucosylase/hydrolase IPR008263 Glycoside hydrolase, family 16, active site
Location(s)
SL2.50ch01:89810092..89812819
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005975
  • GO:0048046
Length
2728
Nb exon
4
Sifter term
GO:0016798
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g099630.2.1 Xyloglucan endotransglucosylase/hydrolase 5 (AHRD V1 **** C0IRG4_ACTDE); contains Interpro domain(s) IPR016455 Xyloglucan endotransglucosylase/hydrolase IPR008263 Glycoside hydrolase, family 16, active site

TTCCTCACCCCCATTGGGCCATATTCATCATTCTCTAAAAAAAGAAAAAAAGAAAAATACACAAACACTGGTCTCTGATTGGATTTGTTTTTCTCACCATGGGTATCATAAAAGGAGTTTTATTTAGTATTGTTTTGATTAATTTGTCACTTGTTGTATTTTGTGGGTATCCTAGAAGGCCAGTAGATGTGCCCTTTTGGAAAAACTATGAGCCAAGTTGGGCTAGTCACCATATTAAGTTCCTCAATGGTGGTACCACTACTGATCTTATTCTCGACAGATCTTCAGGAGCTGGATTTCAGTCAAAGAAATCATATCTGTTTGGGCATTTCAGTATGAAAATGAGGCTTGTTGGTGGAGACTCAGCTGGTGTTGTCACTGCATTTTACCTGTCATCGAATAATGCAGAGCACGATGAGATAGATTTTGAATTTTTGGGGAACAGAACTGGGCAGCCATACATATTGCAGACAAATGTATTCACAGGAGGAAAAGGAAACAGAGAACAGAGAATATATCTTTGGTTTGATCCAACCAAGGGCTACCATTCTTATTCTGTTCTTTGGAATACATACCTCATTGTGATCTTTGTGGACGACGTTCCAATTAGAGCATTCAAAAATTCGAAAGATCTTGGTGTGAAATTTCCATTCAATCAGCCCATGAAGATATACTCGAGTCTATGGGACGCAGATGATTGGGCCACAAGAGGTGGGCTTGAGAAAACCAATTGGGCCAACGCCCCATTCACCGCGTCATACACATCGTTCCACGTGGATGGATGTGAAGCTGCCACGCCACAAGAAGTCCAAGTTTGTAACACTAAAGGCATGAAATGGTGGGATCAAAAGGCCTTCCAAGATTTAGATGCATTACAGTATAGGAGACTTCGTTGGGTTCGTCAAAAATACACTGTTTATAACTATTGCACTGATAAAGCGAGGTACCCTGTTCCACCACCAGAGTGCACTAAGGACAGAGATATTTAAAATCATAATCAAAATTAAGAGGGACTTTATGAAGAAAAAAAACTTAATATGCTTTATGTGTGAGTATTTTAATGATCCTTAAAACAAAGTGCTTTTAATTGAGCTGTATTTCCCTAATTCTTTTTGAGTGTATCATTATTGGTGGAGTCATGAGGATATTATGTATCTCATGCCAGGCCTTTCATGTCTCTTGTGTTTCATCATCATAACCATAATCATGATTGATGTATTGTAATTTATCGAACTATTTGTTACTTATCTCTTAATTAAAAATATGAATTAATACTTTTTTTATTTAAGATAATTTGACTAAATCCTGAATCTCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g099630.2.1SL2.50ch01:89810417..89812721297-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g099630.2SL2.50ch01:89810092..898128192,728-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g099630.2.1.1SL2.50ch01:89812532..89812819288-2
exonexon:Solyc01g099630.2.1.2SL2.50ch01:89812310..89812410101-n/a
exonexon:Solyc01g099630.2.1.3SL2.50ch01:89811756..89811949194-1
exonexon:Solyc01g099630.2.1.4SL2.50ch01:89810092..89810823732-n/a
intronintron:Solyc01g099630.2.1.2SL2.50ch01:89812411..89812531n/a-n/a
intronintron:Solyc01g099630.2.1.3SL2.50ch01:89811950..89812309n/a-n/a
intronintron:Solyc01g099630.2.1.4SL2.50ch01:89810824..89811755n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17698292%2Fdetails feature 17698292
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