Sol Genomics Network

Solanum lycopersicum gene Solyc01g099670.2

Name Solyc01g099670.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc01g099670	Length 2,129

Description

40S ribosomal protein S10-like (AHRD V1 ***- Q2XTB2_SOLTU); contains Interpro domain(s) IPR005326 Plectin/S10, N-terminal

Location(s)

SL2.50ch01:89842719..89844847

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2129

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc01g099670.2.1	SL2.50ch01:89842719..89844847	947	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc01g099670.2 SL2.50ch01:89844847..89842719 (sequence from reverse strand)
GGGTTCAAGGACAGAAAACTTTGCTGCTGAAATCGCTGGAGGCAACTGTGTGATTTCTCTCACAACTTCACCAATCTTCTTCCAGCAGCCATGGTAATTTCTCTTCCCCTATTTGTATCTGTGGAGGCCTTCCGTTTTTTTTTTATCGAAGTTTCTAATTCGAATTTGTCAATTTCTTTTTCAGATTATCTCAGAGAAGAACCGTAGAGAGATCTCCAAATACCTCTTCCAAGGTCAGTATCTTTGCTTTAATGTGTGCGTCATTTTATAAGTTTCGTTCTGATGTGATTTTTTGGTGTTGTTGTAGAGGGAGTATGCTACGCGAAGAAGGATTACAACTTGGCCAAGCATCCGTTAATCGATGTGCCAAATCTACAGGTTATCAAACTGATGCAGAGCTTCAAATCTAAGGAGTATGTTCGCGAGACATTCGCTTGGATGCACTACTACTGGTACCTTACAAATGATGGCATTGAGTTCCTCAGGACTTACCTTAACCTTCCATCTGAAATTGTCCCGGCTACACTGAAGAAATCTGCCAAACCCCTTGGTCGTCCCATGGGTGGCCCTCCAGGCGATCGTCCACGGTAATTATCTTTTTCAGTTTCATTGGTTATTTTGAAATTGAGTTTTTTGCGAGTTGTGATTAATTTTCGCTGTGTACTTGTTCAAAATAATAATCATGGATATGTATCTGGTTTTTCAGTGGACCACCAAGGTTTGAGGGTGATAGGCCAAGGTTTGGTGACAGAGATGGTTACCGTGCTGGACCTAGAGGTCCACCTGGTGAGTTTGGAGGTGAGAAAGGTGGCGCTCCAGCTGACTACCAGCCTGCTTTCAGGGTAATTGCTCTTTTCTTTTAAATCCTGAAGCATTTGTTTTACTTTAGTTAGCCTAACAATTGTATTTATGAGCATTGTTTTCTTGCAATTTGAAGTAAATGGACTATGTTACTATTGATTGAATAAGTATTATCTATTTATTCTGTATTTGTAAGTTTCCCTTTGAGCTTCAAATGAGTTTTTGACTGTTCCCCTAGTATTACCTTTGAGATTCAAATGAGTTTTTCACTGTTTCCCTAGTATAAAATGGAGTCACCATATTCGTCCACTGCAGCATCTAGTGGATATTTTAGTTGCCAAATGAAACCTAAAACTTGTATTAACCTAAATTTATCAAAAGATCAACTTGAATTCGTTGGTCCATCTATTGCTCCGCTTCATTCTACCTGTCACTATGTTATTTGCTTCAGATTAGTTGTTGCCTACAGCTTAGTTGCTCGGACTCCGTAAATGTTGTTGCACCATTGTTGGATCCTATAAAAAGTTCACTACTTTGGAAGAGACCAAGCTACAGTAGGTCTATAAAGATATTAGACAGTGAAATACAGCAAAGCAGAGAAGTGAGTTGCTGATTGTTGATTTGGGTTCTCGTACGTACTGCCTTAGATGGGGTTTGTAGTCACGTGGGAGAACCTAGCTGTCACAAGTCAGCTTCACCTGTTAAGAAAAGTATATTAGGTCTAAACTTAAGTAATCTGCTACATTTTTCTTCTCAATATGCTTTGTTGTTTTAAGAATTATCACTGTCTTGATACCTGCCTGAGTTTTGTTTTTCTTCACTTCATTGGTGTGCGGATCATCATTAAGTTGTGTTGGCGATACCTTGGTGCATGAGAAAGTATCTTAACTCATACCTTGTGTTATTTCACCCAATTCTAAACTATCATGTCACTTGTAGGGTTCTGGTGGAAGACCTGGATTCGGCCGTGGATCTGGAGGTTTTGGCGGCGGTGCACCTACTAGTTCAAGCTTCTCTTAGATTCGTGCCATCTTAGACTTGGTGGTTGTTTCAAATTTTGAAATCAGATGTTGAAATCACTTGGACTTTAATTTTCTAGTTAAAACTTAATATTCCGAGCCGGGCAATTTTATCTTTGTTTATCTTTAGAGAACTATTAAGTTTTGTTCTGTTCCTTGTTCCTTTGTGTCTTTTGAGATATACTTTCAAGTTATTCCGATGTGACAGTGTCAGGCACTTTATATGTTGTTGATGTTTCTAATCTCTCTCTCTGTTAAATTATTAATGATATGATGAAATTGTACCATTACTGAGTTATAGGCTATGCA

Download sequence region

Download sequence (2.1Kb)

Get flanking sequences on SL2.50ch01

mRNA Solyc01g099670.2.1

Ontology terms

None

terms associated with this mRNA

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc01g099670.2.1	SL2.50ch01:89843026..89844757	183	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc01g099670.2	SL2.50ch01:89842719..89844847	2,129	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc01g099670.2.1.1	SL2.50ch01:89844755..89844847	93	-	n/a
exon	exon:Solyc01g099670.2.1.2	SL2.50ch01:89844615..89844663	49	-	2
exon	exon:Solyc01g099670.2.1.3	SL2.50ch01:89844261..89844540	280	-	1
exon	exon:Solyc01g099670.2.1.4	SL2.50ch01:89844006..89844141	136	-	n/a
exon	exon:Solyc01g099670.2.1.5	SL2.50ch01:89842719..89843107	389	-	n/a
intron	intron:Solyc01g099670.2.1.2	SL2.50ch01:89844664..89844754	n/a	-	n/a
intron	intron:Solyc01g099670.2.1.3	SL2.50ch01:89844541..89844614	n/a	-	n/a
intron	intron:Solyc01g099670.2.1.4	SL2.50ch01:89844142..89844260	n/a	-	n/a
intron	intron:Solyc01g099670.2.1.5	SL2.50ch01:89843108..89844005	n/a	-	n/a

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Related views

Genetic loci

Tomato locus db212 (meloidogyne-induced giant cell protein db212)

http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17698329%2Fdetails feature 17698329

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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