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Solanum lycopersicum mRNA Solyc01g100050.2.1

mRNA details  
Name
Solyc01g100050.2.1
Type
mRNA
Length
4,013
Organism
Solanum lycopersicum
Description
WD-40 repeat protein (AHRD V1 *--- Q8Z020_ANASP); contains Interpro domain(s) IPR017986 WD40 repeat, region
Location(s)
SL2.50ch01:90149468..90160261
GFF source
ITAG_eugene
From BOGAS
1
Length
10794
Nb exon
25
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g100050.2.1 WD-40 repeat protein (AHRD V1 *--- Q8Z020_ANASP); contains Interpro domain(s) IPR017986 WD40 repeat, region

TTTCTCTCTCTATATACCTATTCTTTCTCTCTCTAAATATATATATATATATATAATTTCTCTTTCTTCTTCGGCAGCCTTTGGAAATCAAGCACTGATTTATTAATTGTTTATGTGAGAGAGGAGGAGCTGAAACCCTAGAAATCGTAGCGCGTGTGGATATCTAGGGCTTGGATCTGTGGAGTTCTGGAATCGGAGATTGTTGGATTTGGGGGTTTTGAAGAGAGTTGGAAAAAATGTCTTCTCTTAGCAGAGAATTGGTGTTCCTCATACTTCAGTTTCTAGAAGAGGAGAAATTTAAGGAGTCCGTTCACAAGCTCGAGCAAGAATCAGGATTTTTCTTCAATATGAAGTACTTTGAGGAGAAAGTACATGCAGGTGAGTGGGACGAAGTTGAGAAGTACTTGTCCGGATTTACCAAAGTTGACGACAACAGATATTCAATGAAAATCTTTTTTGAGATTAGAAAGCAGAAATATCTTGAAGCTCTTGATAAGCAAGACAAGGCAAAGGCAGTTGAGATTCTTGTGAGTGATTTGAAAGTGTTCTCTACATTCAATGAGGACCTTTACAAAGAGATCACTCAACTCTTGACGCTTACCAATTTCAGAGAGAACGAGCAGCTTTCGAAGTATGGTGACACCAAGACAGCGCGTAGCATAATGTTGATAGAGCTGAAGAAGTTGATTGAAGCAAATCCTCTTTTCCGTGAAAAGCTCGTCTTCCCGACTCTGAGATCTTCAAGATTGCGTACATTAATCAATCAAAGTCTCAACTGGCAGCACCAGCTTTGCAAGAACCCAAGGCCAAACCCTGACATTAAGACTCTGTTCACAGATCATACATGCACTCCTCCAAATGGGGCTGTTGCACCTACACCCGTTAATCTTCCTCCTGCAGCGATTGCAAAACCTGCCGCTTTTACAGCACTTGGTGCACATGGGCCCTTTCCACCTGCAGCAGCAGCTGCTGCAAATGCTAATGCTTTAGCAGGTTGGATGGCAAACGCCGCTGCTTCTTCATCTGTCCAAGCTGCTGTTGTGACAGCATCATCCCTGCCTGTTCCACCAAATCAAGTTTCAATTTTGAAGCGCCCCCTCACACCTCCAGCTACATTAGGCATGCTTGACTATCAGAGTGCTGATCATGAGCAATTAATGAAACGTTTACGACCTGCACAGTCTGTTGAGGAGGTTACGTATCCTACAGTTCGTCAGCAAGCTTCTTGGTCCCTTGATGACTTACCAAGGACCGTAGCTTTTACTTTACCTCAAGGATCCTCAGTCACTAGCATGGACTTTCATCCTTCTCATCATACATATCTGCTCGTTGGATCCACCAATGGTGAAATAACGCTCTGGGAAGTAGCAACACGAGAGAAGTTGGTTGCGAAGGCATTTAAAATATGGGATGTTCAAGCGTGTACTCTGACATTTCAGGCTTCTGCTTCCAAAGATGCACCATTTTCTGTAAGCCGTGTTGCCTGGAGTCCAGATGGGACCTTCGTTGGAGTTGCATTCTCTAAGCATTTGGTCCATCTGTATGCCACTGTTGGAACAAATGATTTGCGCCAGCATTTGGAGATGGATGCCCATGCTGGAAGTGTTAACGACTTAGCATTTGCTTATCCAAACAAGCAGTTATGTATAGTAACATGTGGAGATGATAAGTTGATAAAGGTGTGGGATATAACAGGAAGAAAGCTGTTTAATTTTGAAGGACATGAAGCTCCTGTATATTCCATATGCCCTCATCAGAAGGAGAGCATTCAGTTCATTTTTTCTACTGCTATAGATGGAAAAATAAAAGCTTGGCTGTATGACAATATGGGATCTCGAGTTGACTATGATGCTCCTGGTCATTGGTGTACCACCATGCTTTATAGTGCTGATGGAACTAGATTGTTCTCTTGTGGAACCGGTAAAGAAGGTGATTCTTTTCTTGTGGAATGGAATGAAAGTGAAGGAGCCATAAAGAGGACTTATTCTGGGTTTAGAAAGAAATCAGCTGGTGTTGTGCAGTTTGACACAACTCAAAATCACTTCTTGGCTGTGGGTGAAGATAGCCAGATAAAATTTTGGGACATGGACAATATAAATATTCTTACAACTATAGATGCTGATGGTGGTCTCCCGAGTCTTCCACGCTTGAGATTCAATAAGGAGGGGAATCTTCTTGCTGTTACTACTGCTGACAATGGGATTAAGATACTGGGAAACCCTGCTGGTATGAGATCCTTGAGAACAGTTGAGGCCCCACCTTTTGAAGCACTAAGATCACCCATTGAAGCAGCTGCTATAAAGCAGGGTTCTGGCTCTTCTGTTCCAAATGCTACTCCTGTCAATTGTAAAGTTGAAAGGAGCTCTCCTATCAGGCCGTCTCCTATCCTTAATGGAGTTGATTCTGTGCCCAGAAGCATGGAGAAACCAAGAATATTGGAGGAAGTTTCAGATAAGGCCAAACCCTGGCAGTTAACGGAAATTTTAGACCAAGCTCAATGCAGGCTGGTTACCATGCCTGAGAGTTCAGATTCGAATAATAAGGTTGCAAGGCTTCTTTATACAAATTCTGGTGTTGGTATTCTGGCACTTGGTTCGAATGGTACTCAAAAGTTGTGGAAGTGGACACGCAATGAACAAAATCCAAGTGGCAAGGCCACTGCTAATGTTGTTCCACAATATTGGCAACCGAACAGTGGTCTTCTTATGACCAACGATATTGTAGGTATCAATTTGGAAGAGGCTGTTCCTTGTATAGCTCTCTCAAAGAATGACTCTTATGTAATGTCAGCTGCTGGTGGGAAAGTGTCACTGTTCAATATGATGACGTTTAAGGTAATGACAACATTTATGCCACCTCCGCCGGCTTCAACTTTCTTAGCATTCCATCCTCAAGATAACAATATTATTGCCATTGGCATGGAGGACTCAACGATCCACATTTATAATGTTAGGGTTGATGAGGTAAAATCCAAGTTAAAAGGCCATCAGAAGCGCATTACTGGTCTTGCTTTCTCCACCAACCTCAACATATTGGTTTCATCAGGTGCTGATGCTCAGCTCTGTTTATGGAGCATTGATTCATGGGACAAGAGGAAATCAGTTCCCATTCAGCTGCCTGCTGGTAAAGCACCTAGTGGTGACACTCGAGTACAGTTCCATGCGGACCAAGTCCGCTTGCTAGTATCCCATGAAACACAGTTAGCAATTTATGATGCATCAAAGATGGAAAGAATTCGCCAGTGGGTCCCCCAAGATGCACTTTCTGCTCCAATAACCTATGCGGCTTACTCTTGCAACAGTCAACTAGTTTATGCTTCCTTTTCTGATGGCAACATCGGGGTATTTGATGCCGATACTCTAAGACTTAGATGTCGTGTTGCTCCCTCAGCTTATTTGTCGCAGGCAGTGTTGACTGGGAGTCAATCTGTGTATCCGTTAGTAGTTGCAGCACATCCACAAGAACCCAGCCAATTTGCAGTTGGGTTGACAGATGGAACTGTTAAAGTGATTGAACCACTGGAATCTGAAGGGAAGTGGGGCGTAAGTCCACCTGTTGATAATGGGATGTTAAATGGCAGGGTGGCCTCCTCTTCGACGGCTAACAACCATGCTGCTGACCAAGTTCAAAGATGAAACCTACTGTATTCTGTCAGTGACATTCTTTTTGTGTATCTTATCAGTATAGGTTTTAGTCCACATCTCTTTATGATGGCACACCTCTTACTCTTTTAGAGAGATTCCTAAACTTTGTTCTATGTTTTTTTCTTCATTTTTATCATTTTTTCTCCATAGTTAAAATAGTAGGGGATGTTCTCCGTTCGGCCATTGGCTTTTGGTTGAAGGTGAATGTCACAGGAAATAGCTCAGTTTAAAGGATCAGTTAATGAATGTCAATACTCTACACACTCTCTCTCTCGGCAGTTCAGTTTTTCTTTTTTAATGATATAATGCTTGTCCTGTATTTGTCTAGCATCGCATTGTAGATTGTGATTTTATACTAATAGCTTTTGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g100050.2.1SL2.50ch01:90149703..901598831,133+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g100050.2SL2.50ch01:90149468..9016026110,794+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g100050.2.1.1SL2.50ch01:90149468..90149783316+n/a
exonexon:Solyc01g100050.2.1.10SL2.50ch01:90155035..9015510470+2
exonexon:Solyc01g100050.2.1.11SL2.50ch01:90155177..9015525074+n/a
exonexon:Solyc01g100050.2.1.12SL2.50ch01:90155364..9015545996+2
exonexon:Solyc01g100050.2.1.13SL2.50ch01:90155538..9015563093+n/a
exonexon:Solyc01g100050.2.1.14SL2.50ch01:90156446..90156573128+n/a
exonexon:Solyc01g100050.2.1.15SL2.50ch01:90156687..90156921235+n/a
exonexon:Solyc01g100050.2.1.16SL2.50ch01:90157079..90157246168+1
exonexon:Solyc01g100050.2.1.17SL2.50ch01:90157335..9015742187+n/a
exonexon:Solyc01g100050.2.1.18SL2.50ch01:90157560..90157712153+n/a
exonexon:Solyc01g100050.2.1.19SL2.50ch01:90157796..90157906111+n/a
exonexon:Solyc01g100050.2.1.2SL2.50ch01:90150692..90150871180+n/a
exonexon:Solyc01g100050.2.1.20SL2.50ch01:90158002..90158181180+n/a
exonexon:Solyc01g100050.2.1.21SL2.50ch01:90158267..90158395129+n/a
exonexon:Solyc01g100050.2.1.22SL2.50ch01:90158484..9015857996+n/a
exonexon:Solyc01g100050.2.1.23SL2.50ch01:90159023..90159205183+n/a
exonexon:Solyc01g100050.2.1.24SL2.50ch01:90159278..90159453176+n/a
exonexon:Solyc01g100050.2.1.25SL2.50ch01:90159667..90160261595+n/a
exonexon:Solyc01g100050.2.1.3SL2.50ch01:90150973..90151086114+1
exonexon:Solyc01g100050.2.1.4SL2.50ch01:90152385..90152543159+1
exonexon:Solyc01g100050.2.1.5SL2.50ch01:90153141..90153315175+1
exonexon:Solyc01g100050.2.1.6SL2.50ch01:90153446..90153578133+1
exonexon:Solyc01g100050.2.1.7SL2.50ch01:90154120..90154235116+n/a
exonexon:Solyc01g100050.2.1.8SL2.50ch01:90154370..90154505136+2
exonexon:Solyc01g100050.2.1.9SL2.50ch01:90154650..90154759110+n/a
intronintron:Solyc01g100050.2.1.1SL2.50ch01:90149784..90150691n/a+n/a
intronintron:Solyc01g100050.2.1.10SL2.50ch01:90155105..90155176n/a+n/a
intronintron:Solyc01g100050.2.1.11SL2.50ch01:90155251..90155363n/a+n/a
intronintron:Solyc01g100050.2.1.12SL2.50ch01:90155460..90155537n/a+n/a
intronintron:Solyc01g100050.2.1.13SL2.50ch01:90155631..90156445n/a+n/a
intronintron:Solyc01g100050.2.1.14SL2.50ch01:90156574..90156686n/a+n/a
intronintron:Solyc01g100050.2.1.15SL2.50ch01:90156922..90157078n/a+n/a
intronintron:Solyc01g100050.2.1.16SL2.50ch01:90157247..90157334n/a+n/a
intronintron:Solyc01g100050.2.1.17SL2.50ch01:90157422..90157559n/a+n/a
intronintron:Solyc01g100050.2.1.18SL2.50ch01:90157713..90157795n/a+n/a
intronintron:Solyc01g100050.2.1.19SL2.50ch01:90157907..90158001n/a+n/a
intronintron:Solyc01g100050.2.1.2SL2.50ch01:90150872..90150972n/a+n/a
intronintron:Solyc01g100050.2.1.20SL2.50ch01:90158182..90158266n/a+n/a
intronintron:Solyc01g100050.2.1.21SL2.50ch01:90158396..90158483n/a+n/a
intronintron:Solyc01g100050.2.1.22SL2.50ch01:90158580..90159022n/a+n/a
intronintron:Solyc01g100050.2.1.23SL2.50ch01:90159206..90159277n/a+n/a
intronintron:Solyc01g100050.2.1.24SL2.50ch01:90159454..90159666n/a+n/a
intronintron:Solyc01g100050.2.1.3SL2.50ch01:90151087..90152384n/a+n/a
intronintron:Solyc01g100050.2.1.4SL2.50ch01:90152544..90153140n/a+n/a
intronintron:Solyc01g100050.2.1.5SL2.50ch01:90153316..90153445n/a+n/a
intronintron:Solyc01g100050.2.1.6SL2.50ch01:90153579..90154119n/a+n/a
intronintron:Solyc01g100050.2.1.7SL2.50ch01:90154236..90154369n/a+n/a
intronintron:Solyc01g100050.2.1.8SL2.50ch01:90154506..90154649n/a+n/a
intronintron:Solyc01g100050.2.1.9SL2.50ch01:90154760..90155034n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17698832%2Fdetails feature 17698832
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