Solanum lycopersicum mRNA Solyc01g102300.2.1

mRNA details  
Name
Solyc01g102300.2.1
Type
mRNA
Length
2,676
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch01:91123061..91127641
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
4581
Nb exon
9
Sifter term
  • GO:0003700
  • GO:0042802
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g102300.2.1 BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TTGGTTGGTGTATTATTTTAAAGTATCTGAATGAAGTCTCATTAAACAATTGGGGGTTTGACTGTGTTACTGGACCAGGTGTGGAAGGCTTCCCAATAATGCTTGAGTGCCTAAACATAGATCAATTCTGAGTAGCAGTTAACACACTTGTTCATCATGCCTCTCTCTGAGTTTTTGAAGATGGCTATTGGGAAGCCTGAATCTGGCCAGCAGAAGATCTCATCTACCTCAAATCTGTCATCTTTTCCTGAGAATGACTTGGTTGAGCTTAAATGGCAAAATGGTCAGATTGTGATGCAAGGACAGAACAGTAGTGCTAAGAAAAGCACTGTTCCTAATAATCTTCCGTCGAGTGCCTCAGGGGATCGAGACAAGTACACGGGAAATTCATCAACCTCTAAGATTGGGAAGTTTGGTCTGATGGACTCCATGTTGAATGATATGTCATTAACTGTGCCAACTGGTGAATTAGATTTGATTCAAGAGGATGAAGGGGTGCCTTGGTTAGGATATCCAGCAGATGACAGTCTGCAACAAGATTATTGTGCTCAACTATTACCTGAAATATCTGGCGTGACGGCAAATGAACAGTCTGGACAGAGTGTATTTGGTTTAATAAATAAGAGAGGTAGTTCTGACAAGATGATTGGGGATTCACATAGTGTTCCTGTTCATAATGCTGTGAATTTTGAGCGAAGAAATACATCAAAGGTTTCTCCCTCTTCCAGATTTAGCCCATTAAGTTCATTGCCATCTCAGAAAGGTCATGCGTCGATACCTACCCTAGAATCAGGAGTTTCAGATGTCTTTAGCAGTAAAAATAGCAATACTCCACTATCTGTTTTGGGGGAATCAAATCAAAGTAAAGCTTCAGCTGGTGATGCTAAAAGCAATAGAATTCAAAAGCAAAACATGCCTGGAAATAGGTCCAATTTGTTGAACTTCTCACATTTCTCAAGACCTGCTACATTAGTTAAAGCAGCTAAGCTTCAAAGTAGTACTGGGGGTTCAAATATCTCAGGTTCACCTATTTTAGAAGCTAAGGGAAAAAAAGGAGAAGAAAAAGTGACAATTGGTGACAATCATGTTAGTGCAGCAGCAACTGAAAACTTCTTAACTTCTAAGAAGGATAACTTTCCCCACTATCCAACTAATGGGGTATCTTCCCAACTCGAGTCAAGACCATCTGGAGCCAGCTTTCATGATAGATCATGTCAGGCTGAACAGTCTGATAATGCATTCAGAGATTGTTCAAGTAACAATGACAACACCCATGATCATTTTACCAGTGCTAAGGCAACCAAGGATATTGCCGATGGTGAGAGAAATGTTGAACATGGGGTTGCTTGCTCATCTGTATGTTCTGGTAGCAGTGCAGAGAGAGGATCAAGTGATCAGCCTCTCAACCTAAAGAGAAAAACCCGAGATAATGAGGAGTTTGAGTGTCGAAGTGAAGATGTTGAAGAAGAATCTGTTGGTATAAAAAAACCTTGTGCTGCTCGAGGAGGTACAGGTTCAAAGAGAAGCCGAGCTGCAGAGGTGCATAATTTATCTGAGCGGAGGCGAAGGGATAGGATTAATGAGAAGATGCGTGCATTACAGGAACTTATACCCAACTGCAACAAGGCGGATAAAGCTTCGATGCTTGATGAAGCTATTGAATATTTGAAGACACTTCAACTGCAAGTACAGATAATGTCTGTGGGAGCAGGGCTTTGCGTCCCGCCAATGATGTTCCCTATGCAGCACATGCATGGAGCCCAGATGCCACATTTCTCCCCAATGAGTTTAGGGATGGGTATGGGGATGGGATTTGGGTTGGGTATGCTTGAGATGAATGGTAGATCTTCTGGCTACCCCATGTATCCAATGCCCTCTGTGCAAGGAGGGCATTTTCCCTCACCTCCTATTCCTGCTTCCACCGCTTATCCAGGAATAGCTGTATCTAATCGTCACGTATTTGCACATCCTGGTCAAGGACTTCCAATGTCAATTCCTCGAGCATCTCTGGGTCCTTTGGCCGGGCAACCATCAACAGGTGCTGCTGTTCCTATGAATGTTGCAAGAGAAGGGGTTCCGGTGGAGATACGGGGTGCACAGCCGAATTTGGATTCCAAAACTCCAGTACACAAGAACTCACAGATAGTCCAAAATGCTGAAGCTAGCTGCCCACAGAATCAGACATGCAGTCAGGTACAAGCAACAAATGAGGTTCTGGAAAAATCAGCACAAAAAAATGACCAACTCCCTGATGTCATTGGTAGTGCAGCAAATAGGTTGACCAACCGAACAAATGTGCCCGGAAATGAAGCTGGTCCCAGTTTGTAGACAACTGTAGGTTCTGATCAAATGACTGTTTGGTTCCATCCTAGCTGGGAAGAAGTCATTTCTCATTCAGTGGAAGGTAGCCTCTTTTAACTCCGACCGTTGTGCAGTTCTGAGAATTTATTGTTACTGGAGATGAATGGTAGAGTTCCCGAATGAAGTTGGTTTATGCAACTGCCATCAGAATGTAGACAAATGCATGCACAGACCTTGGTAATATAAAGACACCATAAGGTTCTCCTTCCAATGTAACATCAAAGATATCTAAAAGCAGGGAGCAGCATCTCAACAATGTAGTGTGTATCAGACATCAACGTTCTTCAAATAATAAAATAGCGCAAGCATTTCTCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g102300.2.1SL2.50ch01:91123386..91127293716+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g102300.2SL2.50ch01:91123061..911276414,581+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g102300.2.1.1SL2.50ch01:91123061..9112312464+n/a
exonexon:Solyc01g102300.2.1.2SL2.50ch01:91123271..91123451181+n/a
exonexon:Solyc01g102300.2.1.3SL2.50ch01:91123606..911248151,210+n/a
exonexon:Solyc01g102300.2.1.4SL2.50ch01:91124919..91125023105+1
exonexon:Solyc01g102300.2.1.5SL2.50ch01:91125132..9112519766+n/a
exonexon:Solyc01g102300.2.1.6SL2.50ch01:91125505..9112557066+n/a
exonexon:Solyc01g102300.2.1.7SL2.50ch01:91125677..91126177501+n/a
exonexon:Solyc01g102300.2.1.8SL2.50ch01:91126995..91127115121+n/a
exonexon:Solyc01g102300.2.1.9SL2.50ch01:91127280..91127641362+n/a
intronintron:Solyc01g102300.2.1.1SL2.50ch01:91123125..91123270n/a+n/a
intronintron:Solyc01g102300.2.1.2SL2.50ch01:91123452..91123605n/a+n/a
intronintron:Solyc01g102300.2.1.3SL2.50ch01:91124816..91124918n/a+n/a
intronintron:Solyc01g102300.2.1.4SL2.50ch01:91125024..91125131n/a+n/a
intronintron:Solyc01g102300.2.1.5SL2.50ch01:91125198..91125504n/a+n/a
intronintron:Solyc01g102300.2.1.6SL2.50ch01:91125571..91125676n/a+n/a
intronintron:Solyc01g102300.2.1.7SL2.50ch01:91126178..91126994n/a+n/a
intronintron:Solyc01g102300.2.1.8SL2.50ch01:91127116..91127279n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17700420%2Fdetails feature 17700420
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