Solanum lycopersicum mRNA Solyc01g104680.2.1

mRNA details  
Name
Solyc01g104680.2.1
Type
mRNA
Length
1,676
Organism
Solanum lycopersicum
Description
GTP-binding nuclear protein Ran-A1 (AHRD V1 **-- B3TM31_ELAGV); contains Interpro domain(s) IPR018210 GTP-binding nuclear protein, Ran, conserved site IPR002041 Ran GTPase
Location(s)
SL2.50ch01:93099412..93103220
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005525
  • GO:0007165
Length
3809
Nb exon
9
Sifter term
GO:0003924
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g104680.2.1 GTP-binding nuclear protein Ran-A1 (AHRD V1 **-- B3TM31_ELAGV); contains Interpro domain(s) IPR018210 GTP-binding nuclear protein, Ran, conserved site IPR002041 Ran GTPase

ACATTTTTTAAAACCCTACTTCCGTTTCTCTTCTCATTCCTCACACACACAAAAAAAGCTCTGCCGCTCTCTCTCTTGAAGGAGTTTTCTTCTCATACTTTCGACAATGGTGAGTAAATCTCGTTCCATTTTCATATAATTAGCTGATTTTCTTTTCGAGAATTTGTATGATAATTGGATGATTATTGAGATGTTTATACGATTCACTGTTTTTTCTTTGTATCATCTTTGATTTGGATGAGTATTGGAGGATGTAGATGAGTTTATTCATCTCGGCTGGTAGATTATCGTAATTGGAACTGGGAGAACTTTTATAGCTGCAAATTGTGTATCAGGATGATGAGATTGGTGTTTATAGGCTTTGTTTGGTCTAGTTGTTCCTTTTCTTTGTTTTAGAAGTTTGTTTTAGCTTTGTGGGATGAGTTCTTTTCTTGTTGTATTTGGAATGATAACTGATCTTATTATACATGGGCTACATAAGGTGTCTAATCGACCCAGAATAGTTTGAGATGGAGACGTGTATAGGCTTTGGAGTCTATTTGAGTGTTGGATTTGTATCCATATGTATACGTGTGCTGGAATTTGGCTAAAACGCTTCAGATTATATAATAGGGCTGTTAAAATATTCTTTCTTTTGAGAGATAGCCTGTGGAGAACTTAGATGGCTTTACCAAACCAACAAACTGTAGATTATCCAAGCTTCAAGCTTGTTATTGTGGGGGATGGAGGAACTGGGAAGACAACTTTTGTCAAAAGGCATCTCACTGGTGAATTCGAGAAAAAATATGAACCCACTATTGGTGTGGAGGTTCATCCACTAGACTTCTTCACAAATTGTGGGAAAATTCGCTTTTATTGCTGGGATACAGCCGGACAAGAGAAGTTTGGAGGTCTCAGAGATGGTTACTACATTCATGGGCAATGTGCAATTATCATGTTTGATGTTACAGCCCGTCTGACCTACAAGAATGTTCCTACTTGGCATAGAGATCTTTGCAGGGTTTGTGAAAACATCCCCATTGTTCTCTGTGGAAACAAAGTTGATGTCAAGAACAGGCAGGTTAAGGCAAAGCAAGTTACCTTCCACAGGAAGAAAAATTTGCAGTACTATGAGATCTCGGCAAAGAGTAACTATAACTTTGAGAAGCCTTTTCTGTACCTTGCTAGAAAGCTTGCTGGGGATGGTAATCTTCACTTTGTGGAATCACCTGCACTTGCTCCCCCAGAAGTACAAATTGACTTAGCTGCACAGGCCCTGCACGAACAGGAGCTTCAAGCAGCCCTTAATCAGCCACTTCCAGATGACGATGATGAAGCATTTGAATAGATGGCATAGCTCAGAGCAGATCAGTTTCACTGTTGCACCTTTCCATATTCCTAGTCCTTCAATTTTCTCTATTTGGGCTTTTTTTGTCTTTGTTGTTTGAGGATGTATTTGCTGCTTCCTTGTATTATTGATTGGTTAGTAGATGTATTCGTCTGGGGCCATGAGGTTTTGTTTTGTTAGGTTAGATATTCCCATCCTGATATATGGGCGCACATTGTCGAGGCTCTGTTTTGAGCTTGTTATAATATTACTTGGTCTCATATTCGACAGTATTTCCTCATGTTAGCACCTTCTGAAAGGAAGGTCTGTGTGTGTGTGTACACAAGTATATACTCATTTTAAGCAGGTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g104680.2.1SL2.50ch01:93099760..93102251222-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g104680.2SL2.50ch01:93099412..931032203,809-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g104680.2.1.1SL2.50ch01:93103211..9310322010-n/a
exonexon:Solyc01g104680.2.1.2SL2.50ch01:93102249..93102902654-n/a
exonexon:Solyc01g104680.2.1.3SL2.50ch01:93101751..9310182070-2
exonexon:Solyc01g104680.2.1.4SL2.50ch01:93101437..9310149357-2
exonexon:Solyc01g104680.2.1.5SL2.50ch01:93101200..93101317118-1
exonexon:Solyc01g104680.2.1.6SL2.50ch01:93100679..9310076890-1
exonexon:Solyc01g104680.2.1.7SL2.50ch01:93100408..93100587180-1
exonexon:Solyc01g104680.2.1.8SL2.50ch01:93100241..9310031878-1
exonexon:Solyc01g104680.2.1.9SL2.50ch01:93099412..93099830419-n/a
intronintron:Solyc01g104680.2.1.2SL2.50ch01:93102903..93103210n/a-n/a
intronintron:Solyc01g104680.2.1.3SL2.50ch01:93101821..93102248n/a-n/a
intronintron:Solyc01g104680.2.1.4SL2.50ch01:93101494..93101750n/a-n/a
intronintron:Solyc01g104680.2.1.5SL2.50ch01:93101318..93101436n/a-n/a
intronintron:Solyc01g104680.2.1.6SL2.50ch01:93100769..93101199n/a-n/a
intronintron:Solyc01g104680.2.1.7SL2.50ch01:93100588..93100678n/a-n/a
intronintron:Solyc01g104680.2.1.8SL2.50ch01:93100319..93100407n/a-n/a
intronintron:Solyc01g104680.2.1.9SL2.50ch01:93099831..93100240n/a-n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17703644%2Fdetails feature 17703644
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