Solanum lycopersicum mRNA Solyc01g105070.2.1
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Name | Type |
Length
1,389
|
Organism |
Description
Peroxidase (AHRD V1 **** Q43499_SOLLC); contains Interpro domain(s) IPR002016 Haem peroxidase, plant/fungal/bacterial
|
Location(s)
SL2.50ch01:93354312..93356101
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0055114
- Length
- 1790
- Sifter term
- GO:0004601
![]() | spliced mRNA sequence, including UTRs |
>Solyc01g105070.2.1 Peroxidase (AHRD V1 **** Q43499_SOLLC); contains Interpro domain(s) IPR002016 Haem peroxidase, plant/fungal/bacterial
ATTTCAATCATTAAGCAACGTAACGAAAACTAAAAGAAAGTAGAATTTTATCACAGTACGTACATAACACCAAATATGGCGTATTACAATTACAATTTAATCAACAAAATGGTTACAATTATTTTTATTCTGGTGCTAGTAATTGTTGATGTGACTATGGTATTCGGCCAAGGGACTCGTGTTGGATTTTATTCCAGTACGTGCCCAAGGGCCGAATCCATAGTTCAATCAACGGTGAGGTCTCATTTTCAGTCTGATCCAACAGTGGCACCAGGATTGTTGAGAATGCACTTTCATGATTGTTTCGTACAAGGTTGTGACGGTTCCATCCTCATTTCTGGTACTGGCACTGAGAGAACAGCTCCTCCGAATTCCAATTTGAGAGGATTCGAGGTTATTGACGATGCTAAGCAGCAAATTGAAGCTGTTTGTCCTGGAGTTGTTTCATGTGCTGACATTCTTGCTCTTGCTGCTCGTGATTCCGTTCTCGTGACTAAAGGATTGACCTGGTCTGTCCCCACGGGACGCAGAGATGGACGAGTTTCAAGCGCATCAGACACATCTAATCTGCCAGGTTTTACTGAATCTGTTGATGCTCAAAAGCAAAAGTTTGCTGCAAAGGGTCTCAACACTCAAGATCTTGTCACCCTTGTTGGTGGGCACACAATTGGAACCTCAGCATGCCAATTCTTCAGCTACAGGCTATACAATTTCAACTCCACTGGTGGCCCTGACCCTTCAATAGATGCAACCTTTCTTTCTCAGCTTCAAGCATTATGTCCACAAAACGGAGATGGCTCGAAGCGTGTGGCACTGGACACTGGAAGCGTGAACAATTTTGACACCTCGTATTTCTCTAACTTGAGGAATGGTCGGGGAATTCTGGAATCAGACCAGATATTGTGGACCGATGCTTCGACCAAGGTGTTTGTCCAAAGGTATTTAGGCCTCAGGGGATTTCTTGGATTGAGATTCGGCTTAGAATTTGGAAAGTCCATGGTTAAAATGAGCAATATTGAAGTTTTGACAGGGACTAATGGTGAAATTCGTAAAGTTTGCTCTGCATTCAACTGATGCATATATGTATATACTAATTAGTTTCGTTCAGTTAGCGCAAGCTGCAAGATGAAATTGTTAGTTATATCCAATATCAATAAATAAAAGCATTTACCCACTGAACTTATTGTTGCTCCTGATAAAAGAGGTTATATATACTTGTTAAATTTTCTTTAGGTATAATTATAAGCAAATATCTACGACAACATCAATAATATCTATCATTACCTGTTAAATTAGATTTATAGTGTCTAAACCTTTCACATTGTAAATATATATAACTTACTTTAGAATTTTAATTTGTTAGAGTGCGTACTCTATATTTAGTTTTCT
ATTTCAATCATTAAGCAACGTAACGAAAACTAAAAGAAAGTAGAATTTTATCACAGTACGTACATAACACCAAATATGGCGTATTACAATTACAATTTAATCAACAAAATGGTTACAATTATTTTTATTCTGGTGCTAGTAATTGTTGATGTGACTATGGTATTCGGCCAAGGGACTCGTGTTGGATTTTATTCCAGTACGTGCCCAAGGGCCGAATCCATAGTTCAATCAACGGTGAGGTCTCATTTTCAGTCTGATCCAACAGTGGCACCAGGATTGTTGAGAATGCACTTTCATGATTGTTTCGTACAAGGTTGTGACGGTTCCATCCTCATTTCTGGTACTGGCACTGAGAGAACAGCTCCTCCGAATTCCAATTTGAGAGGATTCGAGGTTATTGACGATGCTAAGCAGCAAATTGAAGCTGTTTGTCCTGGAGTTGTTTCATGTGCTGACATTCTTGCTCTTGCTGCTCGTGATTCCGTTCTCGTGACTAAAGGATTGACCTGGTCTGTCCCCACGGGACGCAGAGATGGACGAGTTTCAAGCGCATCAGACACATCTAATCTGCCAGGTTTTACTGAATCTGTTGATGCTCAAAAGCAAAAGTTTGCTGCAAAGGGTCTCAACACTCAAGATCTTGTCACCCTTGTTGGTGGGCACACAATTGGAACCTCAGCATGCCAATTCTTCAGCTACAGGCTATACAATTTCAACTCCACTGGTGGCCCTGACCCTTCAATAGATGCAACCTTTCTTTCTCAGCTTCAAGCATTATGTCCACAAAACGGAGATGGCTCGAAGCGTGTGGCACTGGACACTGGAAGCGTGAACAATTTTGACACCTCGTATTTCTCTAACTTGAGGAATGGTCGGGGAATTCTGGAATCAGACCAGATATTGTGGACCGATGCTTCGACCAAGGTGTTTGTCCAAAGGTATTTAGGCCTCAGGGGATTTCTTGGATTGAGATTCGGCTTAGAATTTGGAAAGTCCATGGTTAAAATGAGCAATATTGAAGTTTTGACAGGGACTAATGGTGAAATTCGTAAAGTTTGCTCTGCATTCAACTGATGCATATATGTATATACTAATTAGTTTCGTTCAGTTAGCGCAAGCTGCAAGATGAAATTGTTAGTTATATCCAATATCAATAAATAAAAGCATTTACCCACTGAACTTATTGTTGCTCCTGATAAAAGAGGTTATATATACTTGTTAAATTTTCTTTAGGTATAATTATAAGCAAATATCTACGACAACATCAATAATATCTATCATTACCTGTTAAATTAGATTTATAGTGTCTAAACCTTTCACATTGTAAATATATATAACTTACTTTAGAATTTTAATTTGTTAGAGTGCGTACTCTATATTTAGTTTTCT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc01g105070.2.1 | SL2.50ch01:93354386..93355786 | 333 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc01g105070.2 | SL2.50ch01:93354312..93356101 | 1,790 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc01g105070.2.1.1 | SL2.50ch01:93354312..93354803 | 492 | + | n/a |
exon | exon:Solyc01g105070.2.1.2 | SL2.50ch01:93355090..93355252 | 163 | + | n/a |
exon | exon:Solyc01g105070.2.1.3 | SL2.50ch01:93355368..93356101 | 734 | + | n/a |
intron | intron:Solyc01g105070.2.1.1 | SL2.50ch01:93354804..93355089 | n/a | + | n/a |
intron | intron:Solyc01g105070.2.1.2 | SL2.50ch01:93355253..93355367 | n/a | + | n/a |
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