Solanum lycopersicum mRNA Solyc01g106480.2.1

mRNA details  
Name
Solyc01g106480.2.1
Type
mRNA
Length
1,532
Organism
Solanum lycopersicum
Description
Malate dehydrogenase (AHRD V1 ***- A5BEJ8_VITVI); contains Interpro domain(s) IPR010097 Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria
Location(s)
SL2.50ch01:94360821..94364041
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008152
  • GO:0005975
  • GO:0055114
Length
3221
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g106480.2.1 Malate dehydrogenase (AHRD V1 ***- A5BEJ8_VITVI); contains Interpro domain(s) IPR010097 Malate dehydrogenase, NAD-dependent, eukaryotes and gamma proteobacteria

ATCCTTCACCATTCACCTGATATTATTCTCATTTTATCCATAAGAGCATTTTCCCCCTTTTTAAAAAAGAGTTGAAATAATATCATTACATCCTAATTAGAAACACAAATTCTCTCTCATTCCAAAGAATCAGGAAGATGCAGCCATCAGGTGCAGAAGTTCACCAACGAATAGCCAGAATTTCAGCTCATCTTTACCCTTCAAATCCCCAGATGGGAGATGGGTCTATTTTGGAAAGAACAAATTGCAGAGCAAAAGGTGGAGCAGCTGGATTCAAAGTTGCTATACTGGGTGCTGCTGGAGGAATTGGGCAGCCACTTGCAATGTTGATGAAGATGAATCCTTTAGTCTCAGTTCTTCATCTCTATGATGTTGTTAATGCTCCTGGTGTTACTGCTGATATTAGCCACATGGACACTGGTGCTGTTGTGAGGGGTTTTCTAGGGCAAAGTGAGCTTGAAGGTGCACTTACAGGAATGGACCTTGTGATCATACCTGCTGGTATTCCAAGAAAACCTGGAATGACAAGAGATGATCTTTTTAAGATTAATGCTGGAATTGTGAGGACCCTCTGTGAAGGAATTGCAAAGTGCTGTCCTAATGCTATTGTCAATTTGATTAGTAATCCAGTGAACTCCACAGTTCCTATTGCAGCTGAAGTTTTCAAGAAAGCAGGCACTTATGATCCAAAGAAGCTTCTTGGAGTTACCTCACTTGATGTTGTGAGAGCTAACACTTTTGTGGCAGAAGTCTTGGGACTAGATCCTAGGGAAGTAGAGGTTCCTGTCGTTGGAGGTCATGCTGGGGTGACAATTTTGCCTCTTCTCTCACAGGTCAAGCCTCCTTGCTCCTTCACACACGAGGAAACAGAATATTTGACTAAGCGCATTCAAGATGGAGGAACAGAGGTTGTTGAGGCAAAAAAAGGGGCTGGATCTGCAACTCTATCTATGGCATATGCAGCTGTAAAATTTGCAGATGTTTGTCTCAAGGGCTTAAGAGGAGATGCCGGTGTGGTGGCTTGTGCTTTTGTAGCTTCTCAGGTCACAGAACTCCCTTTCTTTGCCTCCAAAGTACGACTTGGCCGTACTGGAGCTGAAGAAGTCTATCAACTTGGTCCCCTAAATGAGTATGAGAGGATTGGACTGGAGAAGGCCAAGAAAGAGCTTGCTGAGAGCATTCAGAAAGGAATTTCCAAAAAGATCTGGCATATATTCCTGATACTTCTTTGATGAATTCGTAGAGTTAGGTCTCTTCGTACCTGATGTATGTAATAGCTATAAAAACAGAGGACAAAAGAAGAGGGCAATTTTATCTATACAGTTTTGCTCAAGCACAAATCTTGCCCGTCTAAAGAGTGAGTTTATAAGGTGAATGGATTTGGAGGTTGGTGAACAATTGGAGTCTTTGACATGGAGACATTGCCCAACTGCACACTGGGTGCCACTGTGTCCTCGATAGTTATCGGATCAACCTGCACAATTTTCTCTGGCACAACTTTGTCACCATCTACCTTTGCCAGAACTTCAAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g106480.2.1SL2.50ch01:94361436..94363904358-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g106480.2SL2.50ch01:94360821..943640413,221-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g106480.2.1.1SL2.50ch01:94363830..94364041212-n/a
exonexon:Solyc01g106480.2.1.10SL2.50ch01:94360821..94361157337-n/a
exonexon:Solyc01g106480.2.1.2SL2.50ch01:94363478..94363693216-n/a
exonexon:Solyc01g106480.2.1.3SL2.50ch01:94362723..94363037315-n/a
exonexon:Solyc01g106480.2.1.4SL2.50ch01:94362355..9436244490-n/a
exonexon:Solyc01g106480.2.1.5SL2.50ch01:94362170..9436225384-n/a
exonexon:Solyc01g106480.2.1.6SL2.50ch01:94362014..9436204936-n/a
exonexon:Solyc01g106480.2.1.7SL2.50ch01:94361830..9436191990-n/a
exonexon:Solyc01g106480.2.1.8SL2.50ch01:94361586..9436168095-1
exonexon:Solyc01g106480.2.1.9SL2.50ch01:94361453..9436150957-n/a
intronintron:Solyc01g106480.2.1.10SL2.50ch01:94361158..94361452n/a-n/a
intronintron:Solyc01g106480.2.1.2SL2.50ch01:94363694..94363829n/a-n/a
intronintron:Solyc01g106480.2.1.3SL2.50ch01:94363038..94363477n/a-n/a
intronintron:Solyc01g106480.2.1.4SL2.50ch01:94362445..94362722n/a-n/a
intronintron:Solyc01g106480.2.1.5SL2.50ch01:94362254..94362354n/a-n/a
intronintron:Solyc01g106480.2.1.6SL2.50ch01:94362050..94362169n/a-n/a
intronintron:Solyc01g106480.2.1.7SL2.50ch01:94361920..94362013n/a-n/a
intronintron:Solyc01g106480.2.1.8SL2.50ch01:94361681..94361829n/a-n/a
intronintron:Solyc01g106480.2.1.9SL2.50ch01:94361510..94361585n/a-n/a
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Related viewsNone found
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