Solanum lycopersicum mRNA Solyc01g107960.2.1

mRNA details  
Name
Solyc01g107960.2.1
Type
mRNA
Length
970
Organism
Solanum lycopersicum
Description
Transcription factor bHLH95 (AHRD V1 **** BH095_ARATH); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch01:95341776..95344010
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2235
Nb exon
3
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g107960.2.1 Transcription factor bHLH95 (AHRD V1 **** BH095_ARATH); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGAATGAAGGCGGCGAGAATAATCATGATCATTTGTGTGATGATATGTGGTCACACCTAGACTGGAATGACCATCAAGTTGAGAGCGGAGAGATCGAGGGTAACAAGTTGCTAGATCCGACTGGGTCTGATACTTGCCAGCCATTAACATTTATTAATGAGGTGGTTGATGTGAGTGTTAATGTCGCCAAAAAGAGAAGTTCAGCCAACCGAAAAAAAAAGGGTAAGAAAATTGCTGAACCAAATTCTAGTGTTGATGGAGCCGAAGTTAGAAGAGCATCAAAACATGAGGTACACAAATGGACAGAAAGAGAAAGGAGAAAGAAGATGCGGACCCTATTCGAGACTCTTCATGCTTTGGTTCCCAACCTCCCTGTTAAGGCGGATAAGTCTAAAATAGTTTATGAAGCAGCGAATCACATTCGAAATCTGCAGAATACTTTCAATAAACTTGAAAGTCAAAAGCTAGAAAGGCTAGAAGAAAATAACATCATGTTAGTGGGTTCACAAAAAGTTGGTAATAGTTGGGAAAAGTATGGGGGTGATCAAGGATCAATCTGTAATTCTAAAGCTATTACACCAGCTAATCATGGTCCTACAGGTTTTATGACATGGAGTTCACCAAATGTGGTACTAAATGTAGCTGGTGAAGATGCACATATTAGTGTTTGTTGTCCTAAAAAGCCAGGGCTATTTACCACCATTTGTTATGTTTTGGAGAAACATAAGATTGACACTGTGTCTGCTAAAATTTCATCTGATCAATTCAGAAGCATGTTCATGATCCAAGCTCATGCTAAAGGTGGAAGTGGGGTAGCTCAATTCTCCGAAGGATTCACCGTAGAAGACATGTACAAGCAAGCTGCAAATGAGATAATGTTGATGACAACCCCCAAATGATCAATATCATATTTACTTTTGAAGTTCATTCGGTGGAGGATGAACAACTGTCGTCGTATAGGCATGTTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g107960.2.1SL2.50ch01:95341775..95343940300+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g107960.2SL2.50ch01:95341776..953440102,235+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g107960.2.1.1SL2.50ch01:95341776..95342156381+n/a
exonexon:Solyc01g107960.2.1.2SL2.50ch01:95342923..95343336414+n/a
exonexon:Solyc01g107960.2.1.3SL2.50ch01:95343836..95344010175+n/a
intronintron:Solyc01g107960.2.1.1SL2.50ch01:95342157..95342922n/a+n/a
intronintron:Solyc01g107960.2.1.2SL2.50ch01:95343337..95343835n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17707377%2Fdetails feature 17707377
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