Solanum lycopersicum mRNA Solyc01g109660.2.1
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Name | Type |
Length
962
|
Organism |
Description
Glycine-rich RNA-binding protein (AHRD V1 *-** B2YKT9_TOBAC); contains Interpro domain(s) IPR015465 RNA recognition motif, glycine rich protein
|
Location(s)
SL2.50ch01:96560713..96561995
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0003676
- GO:0000166
- Length
- 1283
- Sifter term
- GO:0008266
![]() | spliced mRNA sequence, including UTRs |
>Solyc01g109660.2.1 Glycine-rich RNA-binding protein (AHRD V1 *-** B2YKT9_TOBAC); contains Interpro domain(s) IPR015465 RNA recognition motif, glycine rich protein
TTCTCCACAGCTCTTCCTTCACATTCTCTTCAGGGTTTCTCTAGTAGTCTCTCTGAAAAAAAATGGCCGACGTTGAATACAGGTGCTTCGTCGGTGGTCTGGCATGGGCCACCACCGACCAAACACTTTCGGAAGCTTTTTCTCAGTACGGCGAAGTGGTCGAATCCAAGATCATCAATGACCGGGAAACTGGTAGATCTAGAGGATTTGGATTCGTTACCTTCAAGGATGAGCAAGCCATGAGGGATGCTATTGAAGGGATGAACGGCCAGGATCTTGATGGTCGCAACATCACCGTGAACGAAGCTCAATCACGCGGAGGCGGTGGAGGTGGAGGTGGAAGAGGCGGGGGTGGTTACGGAGGTGGCCGACGTGAAGGCGGTGGCGGAGGCTACGGTGGTGGCGGCGGCTACGGAGGTGGCCGACGTGAAGGCGGCGGCGGCGGCTACGGTGGAGGCGGCTACGGAGGTGGTCGTCGTGAAGGTGGTTACGGTGGAGGCGGTGGTGGTTATGGAGGAGGTGACCGCTACAACGATCGCTCTTCAAGAGGTGGAGGCGGTGGTGGTTCCGATGGGAACTGGAGGAATTAGATTTTCTGTTGGCTTTTTAGATTGGTCTCGTCTGAACTTACTTATGGTTTCGAAGTTTGATTGAAGTTACGTTTATGGTTTTGCCGTGGTTACTGTTAGTGTTCTCGTTTTTGACCGCTATTGTTACCGTGATGTTACCCTGTGGATCCTTGTTTACAAAGTTCTCATGAATGGAAGTGAATGGAGATTTATTAATTATAGTCCAATCTCCTGTTTGTTTCATCATCTTTGTTAAGCCATTGTCTAGTTGTCTAGCTGTTTTTGTTGGTTTACATCAAGTGTCCATCCACATTATTAGCTGTGGCCTATTAGTGGTATTGACTAGTAGTGGTCTCGAGTCAACATTCCGCTATCATATCAAGTTATCTTCAT
TTCTCCACAGCTCTTCCTTCACATTCTCTTCAGGGTTTCTCTAGTAGTCTCTCTGAAAAAAAATGGCCGACGTTGAATACAGGTGCTTCGTCGGTGGTCTGGCATGGGCCACCACCGACCAAACACTTTCGGAAGCTTTTTCTCAGTACGGCGAAGTGGTCGAATCCAAGATCATCAATGACCGGGAAACTGGTAGATCTAGAGGATTTGGATTCGTTACCTTCAAGGATGAGCAAGCCATGAGGGATGCTATTGAAGGGATGAACGGCCAGGATCTTGATGGTCGCAACATCACCGTGAACGAAGCTCAATCACGCGGAGGCGGTGGAGGTGGAGGTGGAAGAGGCGGGGGTGGTTACGGAGGTGGCCGACGTGAAGGCGGTGGCGGAGGCTACGGTGGTGGCGGCGGCTACGGAGGTGGCCGACGTGAAGGCGGCGGCGGCGGCTACGGTGGAGGCGGCTACGGAGGTGGTCGTCGTGAAGGTGGTTACGGTGGAGGCGGTGGTGGTTATGGAGGAGGTGACCGCTACAACGATCGCTCTTCAAGAGGTGGAGGCGGTGGTGGTTCCGATGGGAACTGGAGGAATTAGATTTTCTGTTGGCTTTTTAGATTGGTCTCGTCTGAACTTACTTATGGTTTCGAAGTTTGATTGAAGTTACGTTTATGGTTTTGCCGTGGTTACTGTTAGTGTTCTCGTTTTTGACCGCTATTGTTACCGTGATGTTACCCTGTGGATCCTTGTTTACAAAGTTCTCATGAATGGAAGTGAATGGAGATTTATTAATTATAGTCCAATCTCCTGTTTGTTTCATCATCTTTGTTAAGCCATTGTCTAGTTGTCTAGCTGTTTTTGTTGGTTTACATCAAGTGTCCATCCACATTATTAGCTGTGGCCTATTAGTGGTATTGACTAGTAGTGGTCTCGAGTCAACATTCCGCTATCATATCAAGTTATCTTCAT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc01g109660.2.1 | SL2.50ch01:96560774..96561623 | 176 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc01g109660.2 | SL2.50ch01:96560713..96561995 | 1,283 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc01g109660.2.1.1 | SL2.50ch01:96560713..96560882 | 170 | + | n/a |
exon | exon:Solyc01g109660.2.1.2 | SL2.50ch01:96561204..96561995 | 792 | + | n/a |
intron | intron:Solyc01g109660.2.1.1 | SL2.50ch01:96560883..96561203 | n/a | + | n/a |
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