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Solanum lycopersicum mRNA Solyc01g109700.2.1

mRNA details  
Name
Solyc01g109700.2.1
Type
mRNA
Length
1,777
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch01:96594953..96598114
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3162
Nb exon
7
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g109700.2.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

GCTTCACGCATTATACTCTCTTCTTTCTCTCACACACACTAACAGAAAAAGGAAAAGATAGAACAACACAATTTCTTCTATTCTAAAGTTGTATTCATAGTACTTGAAGCGAAATAAAGAGGGAGTTGGTTCAAGAGGACGTAACAAATAAGGAACGCGTTAGGAAGCTACCTAATATTTTCTTTTCTAGTGCAATTTTGAATCGCCTTTGTTACTTTCCGCAAAGTGACAGTAGCAGCTTTTTCTTCTCTTAAACTCTTTCTGAAAAAAGGATCTCTATTATTGATGAATATTGCATTACCAGAAATGCTACATAACATCACTAGCAATGGAAGCTCAGAATTGAGCGTGCTTGATAGAACGAAATGGCAGGTGCAGCAACAAGAGATGAGTTATTTTAATGGACAAAATGATCAACTCATGAATTCTTTTCATCAAACGGCTGAAGCTCAACAATTTCATGGTCTGATCAATGTAAACGATCAGAGTCTTAATGAGCTTGTGACTCGGGCAATAAAGCCAGACCCCTGTATGGAGAACAGTTGGGGTGGTTTTGGGACCACTGGTACTAATGGTTTTGATTATGTTCCAGTTGGAGTTGGACACGGAGGAATGTCACACCCATCTGAAATGAACTATGCTATTTCAAGAACTACAAGTTGCCCGCCTACCATGGCGGACAATGTTGTTAAACCCAAAGACACTAGGCTGAGTTCTAACAGAGGCAGAGAGAGCTTCAAGAAAAGGAAAGCAGATAAGAATCAGCATCTCAAGGAGGTTGCAGAAGAGGAAACCAAAGACAAGAAATTGAAAGAATGCATCGAAGAGGAGGATGATTCTTCCAAGGTAACAACAGAGAAAAAAAGCAACAAAAGGAGTGCGACTAACAGTAGCAACAGTAAGGAAAATTCTGATACTTCAAAGGAGAAGTCCAAAATTACCGATGATAAAAAGCTCGACTATATACATGTCAGAGCACGTCGAGGTCAAGCCACTGATAGTCACAGTTTGGCTGAAAGAGTAAGAAGGGAAAAGATCAGTGAGAGAATGAGATTCCTGCAAGATTTAGTACCAGGTTGTAACAAGATAACAGGGAAAGCAGGAATGCTAGATGAAATAATCAACTACGTCCAATCTCTCCAAAGACAAGTAGAGTTCCTATCCATGAAACTAGCTGCTGTTAATCCAAGGCTTGATATCGATGCAGACAATTTCTTCAACAAAGATATATTTGCAACTAGCACGTCTACTTTTTCCGCAGTGGGAGCTGGAACATCATCTGAAATGCTTAGTATGGCCCAACGCCAGTTCAATTCATTGCAGCAAATAATGTCAAGTTCTGGATTAGAAATGGGTATTGTAAATCTAAACGAAATGGCACTACGTAGAACCACTAGCGCTCCTGTACCAATTCCTGAAATGTTTCTCGACTCATCAAGTATCAATCAAGTTCAGAGCTTTCAAACTTGGAACACTGATTTAGATAACATGTATGCAATGGAGCTTCAACAAGGAAGATCAGCACAGTTTCTTCCCCATCCGTGTACAGGTTTTGCTGAAGCTGGACATGACCTGAAGATGGAAATGTGACCTTATAATTCTAGACATATTCAAGATCCTTGATATGACTTCACCTCAGATGTCATGGATCCTGATTCTTTTTTTCCAAGTACATAACATAGTATATTATGTAAGTAAATGTTGCAGTTCAAGAGTATCAAAGCAATACTATGACACTGTTCATTGGAAATCATATCTTCTCTATCACAGTTGATCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g109700.2.1SL2.50ch01:96595237..96597927435+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g109700.2SL2.50ch01:96594953..965981143,162+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g109700.2.1.1SL2.50ch01:96594953..96595726774+n/a
exonexon:Solyc01g109700.2.1.2SL2.50ch01:96596078..96596323246+n/a
exonexon:Solyc01g109700.2.1.3SL2.50ch01:96596423..96596557135+n/a
exonexon:Solyc01g109700.2.1.4SL2.50ch01:96596659..9659673072+n/a
exonexon:Solyc01g109700.2.1.5SL2.50ch01:96596809..96597027219+n/a
exonexon:Solyc01g109700.2.1.6SL2.50ch01:96597125..96597227103+n/a
exonexon:Solyc01g109700.2.1.7SL2.50ch01:96597887..96598114228+n/a
intronintron:Solyc01g109700.2.1.1SL2.50ch01:96595727..96596077n/a+n/a
intronintron:Solyc01g109700.2.1.2SL2.50ch01:96596324..96596422n/a+n/a
intronintron:Solyc01g109700.2.1.3SL2.50ch01:96596558..96596658n/a+n/a
intronintron:Solyc01g109700.2.1.4SL2.50ch01:96596731..96596808n/a+n/a
intronintron:Solyc01g109700.2.1.5SL2.50ch01:96597028..96597124n/a+n/a
intronintron:Solyc01g109700.2.1.6SL2.50ch01:96597228..96597886n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17709306%2Fdetails feature 17709306
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