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Solanum lycopersicum mRNA Solyc01g109970.2.1

mRNA details  
Name
Solyc01g109970.2.1
Type
mRNA
Length
3,144
Organism
Solanum lycopersicum
Description
DNA repair protein (AHRD V1 *--- Q2UQK2_ASPOR); contains Interpro domain(s) IPR001650 DNA/RNA helicase, C-terminal
Location(s)
SL2.50ch01:96788463..96796240
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005524
Length
7778
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g109970.2.1 DNA repair protein (AHRD V1 *--- Q2UQK2_ASPOR); contains Interpro domain(s) IPR001650 DNA/RNA helicase, C-terminal

ACAAAATAAAAAGAAAAGGAAAAGCTGGGGGCCTGGGAGTGAGAGAATAGTCGACGGCACCATTTTCAGCCAAGTGCCAACGCCTTCTGTCACCTGCAAATCTCACCTATTTTTCTTCATCAGTCTGCTCTACCAGTAACTCTTCAGTGAAAATGGACTTAGCAACGGAAGGATGGCGGAACAATTTTGCTAAACCAATGGCGAAAAGGGCTCAGCCGTACAGCCCCAGAGATTTGTTTTCCAAGGGGATAAAAAAGATGAAATTTGATGAAAGTAAAAACCAGAGTAGTCCTACTGCAGCTGCCACTAGTTGGCGGGAAGAATGCGAACATGGAAAAGAAAAGGGGTCTTCAAGAGTTGCCAACCGCTCCGAAACTTTTGCAATTCCAGACTTGCTCAAAGTGTTAGATTCCGGCAAATTTGGAAGTGTCACCAGAGAGATTGAGGACCTTATTATGCGGCGAATGAAGGCAGTGAACTCTTGTTATGCAAGTGACCCTTCTCTTCCCAACAAAGTCTTGGAATGGGAAAGGAACCATGAATGCGCTTTCAAGGGAAATCAGCCTTCCCCCGCTGTGATTGACTTGGAGGATGGACAGGAAACTAACAACATTGCTTCAGGGCCAATGATTTCTGCATGTTTACCTTCAGCTGAGCTGCTGGTTATTATTGATTCAGACGATGAAGACACTCAGAAGGAGACTATTTCTCCATCCCAGGGGATATACTCTCAGATAAACCCCATTCTGGGGATGCCCTTGAAAAATGCTGCCCTTGATTTCCAAATTAAGGATTTTATGGGCAGGGAATATGGTGAAAGACAGATTTCGGTAGAAGCTGTAAGCCTTGCTGGCGAAGCTGAAATAGAGACAGATAAAGGTGTTTATGTCGGTGTAGAAGATGATGACGAGATTGATGATGGTGCCGAACAGCCTGATGAAGGTTTGACAGACATATGGAATGAGATGTCATTTGCTCTTGAATTCTCAAAGGATGTTGCTGCTGAACCTTCACCAGATGAGCATACATTTGAAGAGGAGGACGAGTGTGATCATTCCTTCATCTTGAAAGATGATATTGGTTATGTGTGTCGTATATGTGGAGTCATTAAGAGAAGTATTGAAACCATCATAGAATTTCAGTATTCGAAGGCCGCCAGGAGTACAAGAACATATCACTATGAAGGTCGGTCGGTAAAGGATATAGGGCCTACTGAACTCCTTCCTGATGGCATCATTCCATCTGATGACATTGATATGACGGAAATTTGTGTTCATCCAAGACATAGGAAACAAATGAAATCTCACCAAGTTGAGGGATTTAATTTTCTTGTTAGCAACTTGTTGAGAGATAAAGGAGGCTGTATCATGGCTCATGCCCCTGGATCTGGCAAGACTTTCATGATAATCAGCTTCCTACAAAGCTTCATGGCTAATAATGATAGAGCTAGGCCTTTGGTTGTGTTACCTAGAGGAATCTTGGGTACATGGAAGAAAGAGTTCTTGAGGTGGCAGGTGGATGAAATTCCCCTCTATGACTTCTACTCAGTAAAAGCGGATAATAGATCTCAACAATTGGAAGTTCTTAAGCAATGGTCACAGGAAAGAAGTGTTCTTTTTCTGGGCTATAAGCAGTTCTCAACAATTGTGTGTGACAATGTTGGTAGTGCGACTGCAGCTGCTTGTCAGGAGATTCTGCTGAAGTGCCCGTCAATTCTCATTCTTGATGAAGGTCACACTCCGCGCAACCAAGACACTGATGTTTTGACTTCACTTGAGAAGGTCCAGACACGCCTGAAGGTGGTGCTTTCTGGCACATTATACCAAAATCATGTTAAAGAGGTCTTTAACATTCTGAACCTTGTGCGTCCAAAATTTCTCAAGCTGGAAACATCCAGAAGCATTAAAAGGACAATCCTAAGCAAAGTGGCAAGCTCAAATAGAAGGAACCTCCTGAAGAAAAGTAGTGACAATGATTTTTATGAGCTCGTGGAGCATACACTTTTAAAGGATGACAATTTCTCAAGGAAGAGTGCTGTCATACTAGGTCTGCGTAAAATGACCGAAAAAGTGCTTCATTATTACAAGGGAGATTTCCTCGAAGAACTTCCAGGTTTGGTGGATTACACTGTCCTTCTAAAGCTCCATCCTAAGCAGAAAAGTGAAGTTGCAGAGCTGAAAAAACTGGGAAGAAAGTTCAAAATCAGTTCTGAAGGAAGTGCACTGTATGTGCACCCACAATTGAAGAGCCTTTCAAGAAACTGTTCTGCTAAAGATAGAGTTGATGAAGAGAAAATTGATACTCTATTAGAGAATTTGGAATTGAGGGAAGGAGTGAAGGCCAAATTCTACCTGAATCTGCTGCAGCTGTGTGAAACAAAAGGTGAAAAAATGTTAGTGTTTAGCCAATACCTCTTGCCTTTGAAATTCTTGGAGAGGTTGACTGTTAAGACTAAGGGTTACAGTTTGGGGAAGGAACTATTTATGATCACTGGTGATACAGACGGGGACATCAGGGAGTCCTCAATGGAGCGATTTAACACTTCACCGGATGCTCGTGTTTTCTTTGGTTCAATTAAGGCATGTGGTGAAGGAATATCACTTGTCGGGGCATCGCGGATTATCATATTGGATGTGCATCTCAACCCATCAGTAACCCGTCAAGCAATAGGACGTGCATTCCGACCAGGCCAGGAGAGGAAAGTATACACTTACAGATTGGTGGCCTCAGATTCACCTGAGGAGGAAGATCATACAACTTGTTTTAAAAAGGAGTCTATTGCAAAGTTATGGTTCGAGTGGAGTGAGAATTATGCTCAGCCCGATTTTGAGATGGAGACTGTCGATATCAACAACTGTGAAGATTTGTTCTTGGAATCATCACGTCTTAATGAAGATTTGGTGGCTCTGTACAAAAGGTAGATAGTGATTGAGAAGTATCAAACAGCTCCTTAAGTGCAGATGTGGTCGTCTAACAAATGGTGGATCCATCATGCCAATGAACTCTTTAGTGACCTGACAGGAAATGCTGTGTTATTATTTGCAGACTGCATGTTAACTATCTGACAATTAGTTTTGTTCAAATTATGTCGAAGTTCAAACTGATTGTAAATATTTTTCCATTGCTAAGACTTCTCGTTTTGTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g109970.2.1SL2.50ch01:96789016..96796017908+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g109970.2SL2.50ch01:96788463..967962407,778+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g109970.2.1.1SL2.50ch01:96788463..96788609147+n/a
exonexon:Solyc01g109970.2.1.2SL2.50ch01:96788967..9678905084+n/a
exonexon:Solyc01g109970.2.1.3SL2.50ch01:96790246..96790814569+n/a
exonexon:Solyc01g109970.2.1.4SL2.50ch01:96792596..96792787192+2
exonexon:Solyc01g109970.2.1.5SL2.50ch01:96793466..96793624159+n/a
exonexon:Solyc01g109970.2.1.6SL2.50ch01:96794167..967959321,766+n/a
exonexon:Solyc01g109970.2.1.7SL2.50ch01:96796014..96796240227+n/a
intronintron:Solyc01g109970.2.1.1SL2.50ch01:96788610..96788966n/a+n/a
intronintron:Solyc01g109970.2.1.2SL2.50ch01:96789051..96790245n/a+n/a
intronintron:Solyc01g109970.2.1.3SL2.50ch01:96790815..96792595n/a+n/a
intronintron:Solyc01g109970.2.1.4SL2.50ch01:96792788..96793465n/a+n/a
intronintron:Solyc01g109970.2.1.5SL2.50ch01:96793625..96794166n/a+n/a
intronintron:Solyc01g109970.2.1.6SL2.50ch01:96795933..96796013n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17709647%2Fdetails feature 17709647
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