Solanum lycopersicum mRNA Solyc01g110030.2.1

mRNA details  
Name
Solyc01g110030.2.1
Type
mRNA
Length
2,282
Organism
Solanum lycopersicum
Description
WD-40 repeat protein (AHRD V1 **-- B2IVX2_NOSP7); contains Interpro domain(s) IPR017986 WD40 repeat, region
Location(s)
SL2.50ch01:96843705..96851850
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
8146
Nb exon
11
Sifter term
GO:0000166
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g110030.2.1 WD-40 repeat protein (AHRD V1 **-- B2IVX2_NOSP7); contains Interpro domain(s) IPR017986 WD40 repeat, region

CGCAGGAGACGGAAACTACTCAATTGCACATTCGCCTTAGTCGTCACAATTCACATTTTGGCAACTCCGTTTTCAGCCCATCGCCGAGAGAATAAATAATAATTTGAAAAGCGCTTCCTCCACGATCTGGTTGCCGGAGGAGGCGATTTTTTGAATGAAGAGTTCACCTGAATTTTCTCGAAATGGCGGAATCGACGACAATTCAGAGGAGCTCGCCTGAAGGTGATGATCATGAACTGAAGGAGGAGAATATTGAGAAGAAAAAGGATTTTACTGCAAATCCTGAGTTTTTCAGTTGTATGCTTCAGCCAGTGCCTGCCGATTCAGATCCAAATTACATTGGAATACGCCGGTTCCTCCTCCATCGCAAAGCTGAATCCGGTGTGCTTCGTCGCAAGGACTGGAGAGGCAATGGAAAAGGATACGTAGCTTATCGTAATTATATTAGTAGGCCAAGGAATTGGGAGACATTGCAAATACCAAGCCGACCAAGTACCCCAGGGAACAGGTGGTTGAGATCTATCTTTATTTCTTCTAGTAGCATGCAACCCCTTTATTGCTTAGTGTGCTTGATTACGATTCATAATTGGTTATTTACTCCTTAACATTTGTGTAATTTTCATTTATCAAATCACTAAGAACTTTGTTAGAAAGAGATACTCAGTTGATTTTTGTTGCACGTTCCTTTTCTACCGGTTCAGAATTGTTTTGATATCATGGAACTTTGGGGAATGTAAAACTTTGTAACATGAAGCCTTTTATTTATTTATTTTATCTTTTTCCATGTCATTTGTTGAAGTTCGTACTCCATACAATCTGACATCAGGATAATTTACTGGTTGATGCATCAGTGGGCGATGGATGCCTTCAGCAAGTCCAGTTTCCCAGTTACTCGAGTCGGATAGCTGGAATTCCTTAAAGGATTTACGAAGTCCCAGTCAAGCAAGTCAAGCATTGAGTCGGACTACTAGTTTCAGTTCAAATGTGAGTGACACTGATGATCGTCCACGTAGAAGGTCGGAACCTGCATATTCCTTTGTGGGGATGCATTGCATTTTTGATCAATGCAAGGCCATGGTTACGGTTATAAAGTTTGGGCATATGAGTTCTGATCTACTTGCATATGGAGCAACCGATGGCAGTTTAACTGTATGCAGTGTCTCCATGCCCCCTTCAGTCATTAAGCAGTTAACAGGGCATTCAAAAGATGTCACAGATTTTGACTTCTCCACAAACAATCAGTACATTGCATCATCTTCAATGGATAAAACTGTCAGAGTATGGGATATTTCTAGAGGCCTTTGCATTAGGGTGATTTATGGAGTCTCTTCACAGCTTTGTATTCGATTTCATCCTGTGAACAACAACTTCCTTTCTGCTGGCAATGCAAAAAAAGAAATAAATGTGTTCAATTTTAGCACGGGGAGAACGATCAGTACAACTGTGGTCGATGGCGAAGTCACTGCCATGGACCATGACCACACTGGTCAGTTTATTTTCTGCGGTGATAGTCAGGGGTGTATTTACACAGTTAGTATGAACTCACATACAGGTGCACTATCTCGAACTCATCGGAATAGAAGTAGCAGTAAGCATAGATCTGCTGTTACAACTGTTGAGTACAGGACATTTTCTCTGCTGGCACGAGGCCCTGTCCTGCTGACTTTTACTCGTGACGGAAGTTTGTCTTTTTTCAGCATCTCTTTGGAGATGAAAGGTTATTTGACACTCCGGTGCTCACTGAAGCTGGCTCCACGGCTACACAGCATTCGTGCTTCTTTCTGTCCTTTACTTTCCCTTGAAAAGGGAGAATACATAGTTGCTGGGAGTGAAGATGCAAATGTTTACTTTTATGATTTGACTCGACCAAAGAATACATGTGTAAACAAACTTCAGGGCCATGGCTATCCAGTAATAGGTATTGCTTGGAATCATGGAGAGAACTTGTTAGCGTCGTCTGATTTTGGCGGCACCGTCATTGTATGGAAGAGAGCAAAAACAGCTTAACATCAGTGCAGATCTGAGCTAAAAGCAGTTTGCATGCAGTTGATCTGTTCGATTCTGGCGTGGAATCTGCGAGGATTGTAATTTTCTATACAGGCATATCAGTTTAGCTATCTGAAAGTTTTTTAGGGGACTTGAAAAGTGTGACATCAGTGAGCTTTTGCATACTGATCGCACGATTGTATGTCATTTTTCACTGACTTTGTACTATGTATTTGATGTCAGTGATTAGAAGGAATTGCATGATTTCTTCAGTAACAATATTCCAATTACAGAAC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g110030.2.1SL2.50ch01:96843979..96849031321-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g110030.2SL2.50ch01:96843705..968518508,146-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g110030.2.1.1SL2.50ch01:96851453..96851850398-n/a
exonexon:Solyc01g110030.2.1.10SL2.50ch01:96844185..9684426177-n/a
exonexon:Solyc01g110030.2.1.11SL2.50ch01:96843705..96844090386-n/a
exonexon:Solyc01g110030.2.1.2SL2.50ch01:96850550..96851072523-n/a
exonexon:Solyc01g110030.2.1.3SL2.50ch01:96848998..96849154157-2
exonexon:Solyc01g110030.2.1.4SL2.50ch01:96848778..96848915138-2
exonexon:Solyc01g110030.2.1.5SL2.50ch01:96846498..96846637140-n/a
exonexon:Solyc01g110030.2.1.6SL2.50ch01:96846099..9684614648-n/a
exonexon:Solyc01g110030.2.1.7SL2.50ch01:96845279..96845389111-n/a
exonexon:Solyc01g110030.2.1.8SL2.50ch01:96845007..96845188182-1
exonexon:Solyc01g110030.2.1.9SL2.50ch01:96844795..96844916122-2
intronintron:Solyc01g110030.2.1.10SL2.50ch01:96844262..96844794n/a-n/a
intronintron:Solyc01g110030.2.1.11SL2.50ch01:96844091..96844184n/a-n/a
intronintron:Solyc01g110030.2.1.2SL2.50ch01:96851073..96851452n/a-n/a
intronintron:Solyc01g110030.2.1.3SL2.50ch01:96849155..96850549n/a-n/a
intronintron:Solyc01g110030.2.1.4SL2.50ch01:96848916..96848997n/a-n/a
intronintron:Solyc01g110030.2.1.5SL2.50ch01:96846638..96848777n/a-n/a
intronintron:Solyc01g110030.2.1.6SL2.50ch01:96846147..96846497n/a-n/a
intronintron:Solyc01g110030.2.1.7SL2.50ch01:96845390..96846098n/a-n/a
intronintron:Solyc01g110030.2.1.8SL2.50ch01:96845189..96845278n/a-n/a
intronintron:Solyc01g110030.2.1.9SL2.50ch01:96844917..96845006n/a-n/a
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