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Solanum lycopersicum mRNA Solyc01g111010.2.1

mRNA details  
Name
Solyc01g111010.2.1
Type
mRNA
Length
2,083
Organism
Solanum lycopersicum
Description
Aquaporin (AHRD V1 *-*- Q40266_MESCR); contains Interpro domain(s) IPR003676 Auxin responsive SAUR protein
Location(s)
SL2.50ch01:97423358..97427715
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
4358
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g111010.2.1 Aquaporin (AHRD V1 *-*- Q40266_MESCR); contains Interpro domain(s) IPR003676 Auxin responsive SAUR protein

ATGGCTATCCGTATGCCTCGAATAATCAAGAAGTCTTCAGATATTCCCAAGGGTCACTTTGTTGTGTATGTTGGAGAGAAACAGAAGAAGAGATTTGTGATTCCGATATCATTCTTGAGTGAACCTTTATTTCAAGATTTGCTTAATCAAGCTGAGGAGGAATTCGGCTTTGATCATCCAATGGGTGGTGTCACAATTCCCTGCACTGAGGATTTGTTTGTCAATCTTACATCTCGCTTGAGGAATTTGCATCTGGGGTATGTTCCAGTGCTAGTGGACAGTGTTGCAGACACAAATCGTCATAAGGCACATATGGTTTTGATGATGAGAGGTCCTTTGTTCCAGATGGCTATTCGTGTACCTCGTATAATCAAGAAGTCCTCGACATCTCTACAAGTTCCCAAGGGACATTTTGCTGTTTATGTTGGGGAGAAGCAGAAGAAGAGATTTGTGATACCAATATCATACTTGAGCCAATCTTCATTTCAAGACTTGCTAAGTCAAGCAGAGGAAGAATTTGGCTTCGATCATCCAATGGGTGGTGTCACAATTCCATGTCCAGAAGACATTTTTATTATGGATTCTACTAATGGAAATGTTCTAGGGGATGAAGAAAGTCAGCTTTCTTTTGGAAGCAGTAATAAAATTCAACCTACTATCTCTATTACACAAAAGCAAGTACCCAGCTCAGATGATGAAAAGAAGAAGTATACTTGTCTCACAATGGCTGAAAGGCTGGGCTTACCTGACTTCTTCTCTTTGGACGTGTGGCGAGCATCGGTTGGAGAGCTTTTAGGCTCTGCGGTTCTTGTTTTTATGTTGGACACCGTAGTGATTTCCACCCTAGAAAGTGATGTCAAAATGCCAAATTTGATTATGTCAATTCTCATAGCAATTACACTCACCATTCTAATCCTTGCTGTTTTTCCTGTGTCTGGTGGCCACATTAGCCCTGTAATTACCTTCTCCTCAGCACTAGTGGGACTAATATCAATGTCACGAGCCATAATTTACATAGTGGCACAATGTGTTGGTGCTATTTTAGGTGCACTAGCACTCAAAGCTGTGTTGAGTAGTACCATTGAACAAAGATTCTCTCTTGGTGGTTGTACCGTTACGGTAGTTACGCCTGGGCTCAATGGGCCTGAAATTGTGGGCTTGGAGATAGCCCAAGCATTTTGGCTTGAGTTTATGTGTACATTTGCTTTGCTTTTTGGTTCACTTTGGATGGCCTATGATCATCGCCAGTCCAAGGCACTTGGGCTTATTACTGTCATGTCTATTGTTGGGCTTCTAGCAGGGATTCTTGTGTTTATTTCAACTTCAGTTACTGCTAAAAAGGGCTATGCTGGAGCTGGAATGAATCCAGCTAGGTGCTTTGGAGCTGCTTTTGTTAGAGGAGGCCACCTGTGGAATGGGCATTGGATCTTTTGGGTTGGGCCTGGACTTGCTTGTTTTGCTTTCTACTTCTATACAAAGATCATTCCTTCGGATCATTTCCAAACTGATGGATACAAGCATGATTTCTTAGCGATAATCGAGACATTGTTCAATCAGAGATAGTGTAGTAGTAGTTTTTGCAAATCATGTACTTATTGCAAACAAAATCCCTATCAGTGGTAAACATATAACTTGTATCCTTGTCAATTGTTTAGCTAGCATTCGCTCAAAAATAGCCCGACTCAATATCACAAACTGCACATAGAACAACTAGTGGCACTTGGACTGCTCCATGTGTAGTCCAATTGATAAGCACAGATTCTGCGGTAACGGTTTGTATGCTTTCTTCTTGCTTCTTTCTCCTCTGGCATCAAAAATTCACCTAGCCAGTTTTCCAATTTTCATTACAAAGTCAACTGGCAGCTACAGCACTCTGTTGTATCATCATGGTCATTAACTAAACCAGACCATTAATTCATTAATTAATTGAGTTGTCTAGTTTCATTAGCCCTCCTTGAACTTCTCCTAATCTAAGGACAAATCACCAGTTCGAATAGTACGTTGTTGATGGCTTATTCCTTTTCGTAGCCGTGTCTGGGAGAAGCTGAAACCTGTCTGTTCCCAACTAAAAGGTGATTCGAGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g111010.2.1SL2.50ch01:97423357..97427195521+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g111010.2SL2.50ch01:97423358..974277154,358+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g111010.2.1.1SL2.50ch01:97423358..97423602245+n/a
exonexon:Solyc01g111010.2.1.2SL2.50ch01:97424570..97424669100+1
exonexon:Solyc01g111010.2.1.3SL2.50ch01:97424957..97425187231+n/a
exonexon:Solyc01g111010.2.1.4SL2.50ch01:97426001..97426110110+n/a
exonexon:Solyc01g111010.2.1.5SL2.50ch01:97426240..9742631879+1
exonexon:Solyc01g111010.2.1.6SL2.50ch01:97426398..974277151,318+n/a
intronintron:Solyc01g111010.2.1.1SL2.50ch01:97423603..97424569n/a+n/a
intronintron:Solyc01g111010.2.1.2SL2.50ch01:97424670..97424956n/a+n/a
intronintron:Solyc01g111010.2.1.3SL2.50ch01:97425188..97426000n/a+n/a
intronintron:Solyc01g111010.2.1.4SL2.50ch01:97426111..97426239n/a+n/a
intronintron:Solyc01g111010.2.1.5SL2.50ch01:97426319..97426397n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17710676%2Fdetails feature 17710676
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