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Solanum lycopersicum mRNA Solyc01g111130.2.1

mRNA details  
Name
Solyc01g111130.2.1
Type
mRNA
Length
1,500
Organism
Solanum lycopersicum
Description
Transcription factor (Fragment) (AHRD V1 *--* D6MK24_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch01:97501203..97505146
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3944
Nb exon
5
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g111130.2.1 Transcription factor (Fragment) (AHRD V1 *--* D6MK24_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

CACAGGCTTTATGTGTAACTATCCGATTGAAAGAAAACTTCGAGTGATATTTTCAAGTAGGAAGTTGATAACGAAAGGGAAAATAAAATTTTACTAAAAAAAGGATAACGGATAACGTGAAGGTGGAATCTTGCATCGGAAAGCACTGCGAGAAAAAGAGAAAAACAAAACAGTGCATAAATTGTTGTTCTTCGACTTCAAAACCCTAGTTTGTCGATTCAATTCGCGGCGATATACTGCGGAAAATGGATCAATTCAACCATGGCGGCCTCTATCAATCGAATCAGCTTCCAAATCATTGTTTAACAGAGTTAAATCAGCTTCCTTCTGATGTTTCCACGCCTCCCAATGGCTTGCTTTCTGAATCAAGCAAACAAAAACCTGAGGCAGAACTCAAAGACTCTATTGCTGCAAGAAAAGTGCAGAAGGCAGATCGAGAAAAATTAAGGAGGGACCGCTTGAACGAGCAGTTCATGGAATTAGGAAAGACCCTTGATCCTGATAGGCCTAAAAATGACAAAGCATCCATCCTAAGTGATACCGTTCAAATACTGAAGGATTTGACTGCTCAGGTCAGCAGATTAAAATCTGAGTATGCTGCACTTACTGATGAAAGCCGTGAGTTGACCCAGGAGAAAAATGATCTCAGAGAAGAGAAGGCATCTCTTAAATCTGATATTGAGAGCCTTAATGCCCAATATCAACAAAGAATGAGGACTATGTATCCATGGGCCGGGATGGATCATTCCATGGTCATGCATCCGCCTTCATATCCGTATCCAATGCCCGTTCCAATTCCAACTGGACCAGTTCCTATGCATCCACCTCTGCAGCCCTATCCTTTCTTCGGCAATCATAATCCTGCAGTTGTTCCAAACCCTTCATCTTTTGTTCAATACATGACTCCCAATACATTGATTGAACAGCAACCGACTCAGTATATGTCTCCAATTATACAACCAGGTAGTATGACCAGGCAAGAATCCAGGAACAAGTCATCAGATCAAGGAGAGAGCAGAATTGAGAAAAGTGAAGATTCCAATGAAGTGGCAACAGATTTAGAGCTTAAGACACCTGGATCTACATCCGAGCAGGACCTTTCATCTGGACAAAAGAAATCCAGAAAGTTGCCAAGGAAGGATAACAGCTTCACGGATGGAAGTTCCTCAAGTAAATGTTCATCATCCCATAGTGTACATGCTGTTTCTTCAAATAGTGTAGTTAGGGGAACAAAGACTGGTGATTGACGTTTGAAACCGTGTAGGAACCAGGTTATAACCATTTTAATTACTTTTCCTTTCTAGCTTCTTCTGCTCCATCTGTTGTATAAAAAGGGTTACAGATAGAGAGTCAGGGAGCTGTTGCTAATGCAATGGGTTTCCAATTTGGATATTTCTCATGTATCACTAACAGTTCTAAGGGGTCGTCACATGGGAGACTAGAAAGCGTGTTCATATAAGAGTAATTGAATGAAAGAGAAAGCTAGCTCCCCTCCATGAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g111130.2.1SL2.50ch01:97501455..97504901334-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g111130.2SL2.50ch01:97501203..975051463,944-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g111130.2.1.1SL2.50ch01:97504777..97505146370-1
exonexon:Solyc01g111130.2.1.2SL2.50ch01:97503416..97503540125-2
exonexon:Solyc01g111130.2.1.3SL2.50ch01:97502570..97502697128-n/a
exonexon:Solyc01g111130.2.1.4SL2.50ch01:97502008..97502478471-n/a
exonexon:Solyc01g111130.2.1.5SL2.50ch01:97501203..97501608406-n/a
intronintron:Solyc01g111130.2.1.2SL2.50ch01:97503541..97504776n/a-n/a
intronintron:Solyc01g111130.2.1.3SL2.50ch01:97502698..97503415n/a-n/a
intronintron:Solyc01g111130.2.1.4SL2.50ch01:97502479..97502569n/a-n/a
intronintron:Solyc01g111130.2.1.5SL2.50ch01:97501609..97502007n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17710862%2Fdetails feature 17710862
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