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Solanum lycopersicum mRNA Solyc01g111880.2.1

mRNA details  
Name
Solyc01g111880.2.1
Type
mRNA
Length
2,089
Organism
Solanum lycopersicum
Description
Tyrosine-protein kinase transforming protein Src (AHRD V1 *-** SRC_AVIST); contains Interpro domain(s) IPR015783 ATMRK serine/threonine protein kinase-like
Location(s)
SL2.50ch01:98042498..98050306
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008152
  • GO:0006468
Length
7809
Nb exon
16
Sifter term
GO:0004713
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc01g111880.2.1 Tyrosine-protein kinase transforming protein Src (AHRD V1 *-** SRC_AVIST); contains Interpro domain(s) IPR015783 ATMRK serine/threonine protein kinase-like

TGAATATTTCTTAAGGAAGATTATATAAAAGGCGAAGATAAAGCAAATCCACGTCAAGTTGACTGTACATGCGCCGTGGTTACATTACATCTATCTTTTCAAGAAAAGACGAAACCCCTCTCCGCCTCCGGGTCAGCTCACCTACATTCATTGGATTCAAAACGCCAACGGAATGAAATAAACCACTCCAACAAACATGCATATACAATTTTGAAATTTTTCATCTCATTCACTTTACGTAAACTGCACCGTGACTCAAATGGCAATAAAGGATAACGAGAGTTGTGGCAGTAGAGTGGTGGATTCGGCCACTACCAGTGGTCGTTTTCATAGGAAAAAATTGGAGGTTTACAATGAGGTGCTTCGGAGGCTTAAAGAAGAATCCGACAATAACGACACTTTACAATCTGCTTTTGACGATGAACTTTGGGCTCATTTCAATCGCCTTCCTACTCGGTACGCATTGGATGTGAATGTTGAGAGGGCAGAAGATGTACTCACACACAAGCGATTACTACATCTTGCACATGATCCAGCTAATAGACCTGCCTTTGAAGTCCGGTTGGTGCAGGTTGCTCCCATTCCTGATGAAAACTCAGTAGATTCTGTTTATTCGAGCTCTGCAAAGGAGCAAATTAGTAGAAGCATCCATCCTCCACCTGCCTTTGGTTCTTCTCCTAATCTTGAAGCCCTAGCTTGCGAAGTTGTCAAATCTGAAGTTCAAGATGAGGATGCTGCTCCTACTTGTGCAAATATTTCACGGCCAATGCATGAAATAACATTCTCAATGGTTGACAAGCCAAAACTTCTCAGCCAGTTAACTTCATTACTAGCTGAGCTTGGGCTGAACATCCAGGAAGCACATGCCTTTTCCACTGTGGACGGCTACTCCCTAGATGTCTTTGTTGTTGATGGTTGGCCCTATGAGGAAGTTGTGCAACTTCGAGCTGCATTAGAGAGGGAAATCTCGAGAACGGAGAAATCATGGCCTAGCCCATCAAAATCACTAAAAAAGCAGGAACAAGACATGATCAAATGTGAATTTGACCATTTGACAATACCTTTTGATGGCGTTGATGTCTGGGAAATTGATCATCAGCTACTAAAATTTGAATACAAGATTGCATCTGGTTCATATGGTGACTTATATAAAGGTACATACTGCAGTCAAGAAGTAGCTATCAAAATCCTAAAATCTGAGCGCTTGAACACAGAATTGCAGACGGAGTTCGCCCAAGAAGTGTATATCATGAGAAAAGTTCGTCACAAGAACGTTGTGCAGTTCATAGGGGCTTGTACTAGCCCTCCCAACTTGTGTATAGTAACAGAGTACATGTCTGGGGGAAGTGTATATGACTATTTACACAAACAAAGGGGCAGTTTTAAACTACCTACTGTGCTTAAAGTAGCGATTGATGTATCCAAAGGGATGAACTACCTGCATCAAAATAATATTATACATAGGGACTTGAAGGCCGCCAATCTACTGATGGATGAAAATGAAGTCGTTAAAGTGGCTGATTTTGGTGTTGCCAGGGTAAAGGCACAAACCGGTGTCATGACAGCAGAGACCGGTACTTATAGATGGATGGCCCCTGAGGTAATAGAACACAAGCCCTATGATCACAAAGCAGACGTATTCAGTTTTGGGGTTGTGCTATGGGAGTTGCTGACAGGAAAGATTCCATATGAGTACTTAACCCCATTGCAAGCTGCTATTGGAGTGGTCCAGAAGGGTTTGCGACCAACCATACCCAAGCACACTCCTCCTAAACTTGCTGATCTGCTCGAGACATGCTGGCAGCAAGATCCAACATCCAGACCTGACTTTTCTGCAATAGTCGATATTTTGCAGCAAATAGCAAAAGAGGTTGGACATGAAAAAGCAGATCGTTGCAAGGAGAAGGCATCTGGAGGATTCTTTTCAGCGCTTAGACGTGGGCATCACTGAGTTGATGCAAATACAGAATATTGATGCAGTGATATTTTTAGTTACACCTAATTTAAACATGCTTTTAGCCTATTTATTCTTACTGTACAGATTGTTTTTTTCACTGACCAATGCCCCAATAGTCGAATAAAAATTTTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc01g111880.2.1SL2.50ch01:98042635..98050047564-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc01g111880.2SL2.50ch01:98042498..980503067,809-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc01g111880.2.1.1SL2.50ch01:98049851..98050306456-1
exonexon:Solyc01g111880.2.1.10SL2.50ch01:98045873..9804594674-2
exonexon:Solyc01g111880.2.1.11SL2.50ch01:98045560..98045735176-n/a
exonexon:Solyc01g111880.2.1.12SL2.50ch01:98044163..9804425896-n/a
exonexon:Solyc01g111880.2.1.13SL2.50ch01:98043420..9804350081-n/a
exonexon:Solyc01g111880.2.1.14SL2.50ch01:98043271..9804332454-n/a
exonexon:Solyc01g111880.2.1.15SL2.50ch01:98043002..98043136135-n/a
exonexon:Solyc01g111880.2.1.16SL2.50ch01:98042498..98042716219-n/a
exonexon:Solyc01g111880.2.1.2SL2.50ch01:98049363..98049477115-n/a
exonexon:Solyc01g111880.2.1.3SL2.50ch01:98049016..9804908974-1
exonexon:Solyc01g111880.2.1.4SL2.50ch01:98048760..98048876117-1
exonexon:Solyc01g111880.2.1.5SL2.50ch01:98048241..9804829555-n/a
exonexon:Solyc01g111880.2.1.6SL2.50ch01:98047798..98047908111-n/a
exonexon:Solyc01g111880.2.1.7SL2.50ch01:98047546..9804759651-n/a
exonexon:Solyc01g111880.2.1.8SL2.50ch01:98046327..98046493167-1
exonexon:Solyc01g111880.2.1.9SL2.50ch01:98046140..98046247108-1
intronintron:Solyc01g111880.2.1.10SL2.50ch01:98045947..98046139n/a-n/a
intronintron:Solyc01g111880.2.1.11SL2.50ch01:98045736..98045872n/a-n/a
intronintron:Solyc01g111880.2.1.12SL2.50ch01:98044259..98045559n/a-n/a
intronintron:Solyc01g111880.2.1.13SL2.50ch01:98043501..98044162n/a-n/a
intronintron:Solyc01g111880.2.1.14SL2.50ch01:98043325..98043419n/a-n/a
intronintron:Solyc01g111880.2.1.15SL2.50ch01:98043137..98043270n/a-n/a
intronintron:Solyc01g111880.2.1.16SL2.50ch01:98042717..98043001n/a-n/a
intronintron:Solyc01g111880.2.1.2SL2.50ch01:98049478..98049850n/a-n/a
intronintron:Solyc01g111880.2.1.3SL2.50ch01:98049090..98049362n/a-n/a
intronintron:Solyc01g111880.2.1.4SL2.50ch01:98048877..98049015n/a-n/a
intronintron:Solyc01g111880.2.1.5SL2.50ch01:98048296..98048759n/a-n/a
intronintron:Solyc01g111880.2.1.6SL2.50ch01:98047909..98048240n/a-n/a
intronintron:Solyc01g111880.2.1.7SL2.50ch01:98047597..98047797n/a-n/a
intronintron:Solyc01g111880.2.1.8SL2.50ch01:98046494..98047545n/a-n/a
intronintron:Solyc01g111880.2.1.9SL2.50ch01:98046248..98046326n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17711766%2Fdetails feature 17711766
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