Solanum lycopersicum mRNA Solyc02g021640.2.1

mRNA details  
Name
Solyc02g021640.2.1
Type
mRNA
Length
2,520
Organism
Solanum lycopersicum
Description
Phototropic-responsive NPH3 family protein (AHRD V1 **-- D7KEU3_ARALY); contains Interpro domain(s) IPR004249 NPH3
Location(s)
SL2.50ch02:23331971..23335731
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005515
  • GO:0009416
Length
3761
Nb exon
4
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g021640.2.1 Phototropic-responsive NPH3 family protein (AHRD V1 **-- D7KEU3_ARALY); contains Interpro domain(s) IPR004249 NPH3

AATTAATTAGCAAAACAATGGTGAGATATTTTCTTACATTTTCATCATGCCTTAAATTTTCTCTCTCTCTATTAATGGGGTTGTTTAAGGGTTGAGTGTTGGAATCTTATGGTGACAAGTGGGTATTTATTGGAATTGGAATTGGAGTTGACCTAAATTTATTGTCTCATTTCGGAAACAATACTTGTCTTAAACTGAGAGATTTGTGAAGTGGGTATTTTGAGTAAAGTAGGTGCATTTTGGTGGATCTGTACAAGTTTGTTGTTGGTGAAGCAGCTCAATAAAGGAGTGTGTGTATGTGGATGAATTAAGGGGGTTTGTGTTTGTAACAGTCGAGGGGGAGATATGGCATGTATGAAGTTGGGATCCAAAACAGATGCATTCCAAAGAAAAGGCCAGGCCTGGTTCTGCACAACTGGCCTCCCAAGTGACATTGTTGTTGAAGTTGGGGAAATGACTTTCCATCTCCACAAGTTCCCATTGCTTTCTAGAAGTGGGGTTATGGAAAAACGGATTGCAGAAGCATCTGAAGGAGAAGATGGCTGTGTTATTGAACTCAATGACATCCCTGGTGGTGCTAAAACATTTGAACTAGTAGCAAAATTTTGTTATGGGGTTAAACTAGAGCTTACAGCAGGTAATGCTGTATACCTTCGCTGTGCCGCAGAGCATCTTGATATGACTGAAGAATATGGGGAGGGGAATCTGATATCACAGACTGAGATTTTTCTGAATCAGGTAGTTCTCCGTAGCTGGAAAGACTCTTTAAAGGCACTCCAAACCTGTGATGATGTTCTTCCATATGCTGAAGAACTCAGAATTACAAAAAGGTGCATCGATTCATTAGCTGTTAAGGCATGTACTGATCCGAACCTGTTTGGTTGGCCTGTGATGGAGCACGTTGGCCCCTTGCAGAGTCCTGGAGGGAGTATCCTATGGAATGGAATAAGCACTGGAGCTAGGCCAAAACATTCAAGTTCAGATTGGTGGTATGAGGATGCATCAACTTTAAGTTTACCTCTTTACAAGAGGCTAATTTCTGCTATGGAATCTCAAGGCGTCAAACAGGATATTGTTGCTGGTTCCCTCAGTTATTATGCTAAAAAGTACCTGCCTGGGCTAAACAGGCGGCAGACCTCTTCTGAGTCCACTAACCGACTTGCACCAGTTGGTTTAGGTTCTTCTCTATCAGAAGAAGATCAGAAGCTTTTACTTGAAGAGGTGGATAATTTACTTCCCATGCAAAAAGGCCTAGTTCCAACTAAATTCCTCTTTGGCCTACTGAAAACAGCTTTGATTCTTCGAGCCTGTCCCTCTTGCATATCAAACTTGGAGAAAAGGATAGGAATGCAGCTTGATCAGGCCACTCTAGAAGATCTCTTAATGCCTAATTTCTCTTACTCGATGGAAACACTTTATAATGTTGACTGCGTACAGAGAATTCTAGAGCACTTCTTAGCCATGGATCAAGGAACTGGTGGTGAATCACCTTGTTCCATTGATGATGAGCAATTGATTGGTTCACCATCTCTGACACCAATCACTATGGTGGCAAAACTAATCGATGGATATCTTGCTGAGGTTGCCCCAGATGTTAACTTGAAGCTTCCCAAATTTCAGACTCTTGCTGCTTCTGTTCCTGAATATGCAAGGCCCTTGGATGATGGCCTTTATCGTGCAATTGACATTTATCTCAAGTCACATCCATGGTTGGGAGAATCTGATAGGGAACAACTCTGCAGGCTCATGGATTGCCAGAAACTCTCCTTGGAAGCTTGTACACATGCTGCACAGAATGAACGGCTCCCTTTAAGGATTATAGTACAAGTACTCTTCTTTGAACAGCTGCAGTTGAGAACATCCATTGCAGGATGCTTCCTAGTGTCTGAAAACCTTGATGAGGGGTCAAGGCAGTTAAGAAGTGGCACGGTGGGACCAAATGAGGGGGGCTGGGCTACTGCTGTGAGAGAAAACCAGGTGTTGAAGGTGGGAATGGATAGTATGAGGGTGCGCGTGTCAGAGCTCGAGAAGGAGTGCTCAACCATGAGGCAGGAGATTGAGAAGTTGGGTCGATCAAAGGGATCAAGCACTTGGGGAAATGTATCCAAGAAGTTTGGTTTCAAGATGAAATCTCAAATGTGCAGTGCTCAGGAGGGATCTGTTAGTAACCAGAACAAGATAAATAGTAAGGCTATAAAGGATGACAAGGCAAAAGAAAACTATCGAAAGCACTAGAAAAACTTATCGATAGATGAATGATGAATTATTCTCTGTTTCTCTATTCTTTGAAGGATCTTGGCTTGCTTCTGTTTAGTTTAAGTTTCTCCAGTTTCTGTCATATATGTCGAGTAGTTTCTTTGACAATCTGGTCTACGTAGACTACATACAATTAACATCATCAAGTGTATTTTATGTATCTTATCTAGAATTGTTTGTCACTCTTTTTACCTTCAACAATAAGTGCAAACATCTAAATTTGTCCAAATCATCTGTTGTAGTGTGAGTTGTTTGAATGAAGAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g021640.2.1SL2.50ch02:23332255..23335386630-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g021640.2SL2.50ch02:23331971..233357313,761-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g021640.2.1.1SL2.50ch02:23335328..23335731404-1
exonexon:Solyc02g021640.2.1.2SL2.50ch02:23334960..2333502970-n/a
exonexon:Solyc02g021640.2.1.3SL2.50ch02:23333214..233344371,224-n/a
exonexon:Solyc02g021640.2.1.4SL2.50ch02:23331971..23332792822-n/a
intronintron:Solyc02g021640.2.1.2SL2.50ch02:23335030..23335327n/a-n/a
intronintron:Solyc02g021640.2.1.3SL2.50ch02:23334438..23334959n/a-n/a
intronintron:Solyc02g021640.2.1.4SL2.50ch02:23332793..23333213n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17714527%2Fdetails feature 17714527
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)