Solanum lycopersicum mRNA Solyc02g037530.2.1

mRNA details  
Name
Solyc02g037530.2.1
Type
mRNA
Length
2,786
Organism
Solanum lycopersicum
Description
Auxin response factor 8 (AHRD V1 **** A7L5C4_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch02:31048794..31059050
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
  • GO:0046983
Length
10257
Nb exon
14
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g037530.2.1 Auxin response factor 8 (AHRD V1 **** A7L5C4_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

ATGAAGCTTTCAACATCAGGAATGGGTCAGCAGGCTCATGAAGGAGGAGAGAAAAAGTGTTTGAACTCAGAGCTATGGCATGCTTGTGCTGGTCCTCTGGTGTGCCTACCAACTGTCGGAAGTCGAGTTGTTTACTTTCCTCAGGGTCATAGTGAACAGGTAGCTGCAACAACTAATAAAGAAGTTGATGCACATATACCCAATTACCCAAATTTGTCGCCGCAGTTGATCTGTCAACTCCACAATGTCACAATGCATGCAGATGTTGAAACAGACGAAGTGTACGCACAAATGACTTTGCAGCCCTTGACACCGGAAGAACAAAAAGATACATATCTTCCTGTTGAGTTTGGAATCCCTAGCAAGCAGCCTACTAACTATTTTTGTAAGACGCTGACTGCAAGTGATACTAGCACGCATGGTGGCTTTTCTGTCCCTCGTCGTGCCGCAGAGAAAGTTTTTCCTCCTCTGGATTTCTCGCAGACACCACCTGCCCAAGAACTAATTGCAAGGGATCTGCATGATGTTGAATGGAAGTTCAGGCATATTTTCCGAGGACAGCCTAAGCGGCATCTTCTTACCACTGGCTGGAGTGTGTTTGTTAGCGCCAAAAGGCTTGTTGCTGGAGATTCTGTTCTTTTCATTTGGAATGAGAAAAATCAGCTCCTTCTAGGAATTCGACGTGCAGTTCGACCACAGACTGTGATGCCATCATCAGTTCTATCTAGTGATAGCATGCACATTGGATTACTTGCTGCTGCTGCTCATGCTGCTGCTACTAATAGCTGTTTCAATGTCTTTTTTAACCCAAGGGCTAGCCCATCCGAATTTGTTATACCTCTTTCAAAATACATCAAAGCTGTATATCACACTCGTGTTTCTGTTGGAATGCGCTTTCGGATGCTATTTGAAACTGAAGAATCAAGTGTTCGAAGATACATGGGCACAATTACTGGGATTGGTGACTTAGATCCAGTTCGCTGGGCAAACTCTCACTGGCGGTCTGTCAAGGTTGGTTGGGATGAGTCAACTGCAGGAGAGAGGCAACCAAGGGTCTCATTATGGGAGATTGAGCCTTTGACTACTTTTCCGATGTATCCATCTCTTTTTCCTCTAAGGCTAAAGAGGCCTTTCTATCAAGGAACCTCATCTTATCAGGATAGTAACAATGAAGCTATTAATCGAATGTCATGGTTAAGAGGGAATGCTGGTGAGCTAGGACATCATTCAATGAATCTTCAGTCTTTTGGCATGCTTCCTTGGATGCAACAGAGAGTCGATTCAACAATTCTCCCAAATGATATTAATCAGCACTATCAAGCTATGCTGGCTACTGGCTTGCAAAGTTTTGGGAGTGGAGATTTACTGAAACAGCAATTAATGCAGTTTCAGCAGCCTGTCCAATATCTGCAACATGCAAGTACTGAGAATTCAATTTTGCATCAGCAGCAGCAGCAGCAGCAGCAAATAATGCAGCAAGCAGTTCATCAGCATATGCTGCCTGCTCAAACCCAAATGCTGTCAGAGAACCTTCAAAGGCAATCCCAGCATCAATCCAATAATCAGTCAGAAGAACAGGCTCACCAACACACTTACCAAGAAGCATTCCAACTCCCGCACGACCAGCTCCAGCAGAGGCAACCATCAAATGTTACCTCTCCATTTTTGAAAGCAGATTTTGCAGATTTGACCTCTAAGTTTTCAGCATCTGTTGCCCCTTCAGGCGTGCAAAATATGCTTGGTTCGTTGTGTTCTGAAGGAAGTAATAATTCATTGAATATCAACAGAACTGGTCAGTCCGTGATCATAGAGCAGTCGCCTCAACAGTCCTGGATGTCAAAATTTACAGAGTCACAACTAAATACGTGCTCCAACTCATCATCACTTCCAACTTACGGGAAAGATACATCCAATCCTAGGGGAAATTGTAGCTTGGATTCCCAGAATCAAGCGCTTTTTGGTGCTAATATTGATTCTTCAGGGCATCTCCTTCCGACCACAGTGTCTAATGTTACTACTACATGTGCTGATATGTCCTTAATGCCACTTGGGGCTTCTGGATATCAGAATTCTTTATATGGTTATGTGCAAGACTCTTCTGAGTTGTTGCACAATGCAGGACAAATTGATCCACCAAATGCAACCCATACATTTGTCAAGGTTTACAAATCGGGATGTGTTGGGAGGTCACTGGATATCACTCAGTTCCACAGCTATCATGAGCTGCGACGGGAATTGGGGCAGATGTTCGGTATTGAGGGATTCCTTGAAGACCCTCAAAGATCAGGCTGGCAGCTTGTATTTGTTGACAGGGAGAATGATATCCTTCTCCTTGGAGACGATCCATGGGAGGCGTTTGTCAATAACGTCTGGTATATAAAAATCCTTTCACCCGAAGATGTGCAGAAGCTGGGAAAGGAAGAGGCTGAATCCCTGAACCGTGGAGCGGTTGAAAGGATGAGCAGCACTAATGCTGATGATCGGGATCTTATTTCTGGAATGCCATCTCTTGGATCGCTGGAGTACTGATTGTTGGAATGCTTCAAAAGAAGAGGACTGATTCTGATTCTCAATCTTCTCAAGGGTCAGAAATTCAAATTTCATGCTTCATAACCTGGCTTCTTTAGCTTTCGTCTAATTGGTCCATCTCCCAATTGTATGTTGTATTTTGCGTTTGGATGTAGCTGTAATAGGACTTAAGGGTTCTCCCATTTGTATGGTGTAGTTTTCATTGTAATCCTGTTGTACAAGTTAGTATAATTTACTGTACGGCTCAAGATGAGACG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g037530.2.1SL2.50ch02:31048793..31058793843+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g037530.2SL2.50ch02:31048794..3105905010,257+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g037530.2.1.1SL2.50ch02:31048794..3104883946+n/a
exonexon:Solyc02g037530.2.1.10SL2.50ch02:31055012..3105508776+1
exonexon:Solyc02g037530.2.1.11SL2.50ch02:31056461..31056608148+n/a
exonexon:Solyc02g037530.2.1.12SL2.50ch02:31057103..310581031,001+2
exonexon:Solyc02g037530.2.1.13SL2.50ch02:31058181..31058371191+n/a
exonexon:Solyc02g037530.2.1.14SL2.50ch02:31058616..31059050435+1
exonexon:Solyc02g037530.2.1.2SL2.50ch02:31049059..31049171113+2
exonexon:Solyc02g037530.2.1.3SL2.50ch02:31049267..3104936599+n/a
exonexon:Solyc02g037530.2.1.4SL2.50ch02:31049449..3104950557+n/a
exonexon:Solyc02g037530.2.1.5SL2.50ch02:31049608..31049763156+n/a
exonexon:Solyc02g037530.2.1.6SL2.50ch02:31049846..3104993085+n/a
exonexon:Solyc02g037530.2.1.7SL2.50ch02:31053391..3105348191+2
exonexon:Solyc02g037530.2.1.8SL2.50ch02:31053590..31053754165+1
exonexon:Solyc02g037530.2.1.9SL2.50ch02:31053843..31053965123+1
intronintron:Solyc02g037530.2.1.1SL2.50ch02:31048840..31049058n/a+n/a
intronintron:Solyc02g037530.2.1.10SL2.50ch02:31055088..31056460n/a+n/a
intronintron:Solyc02g037530.2.1.11SL2.50ch02:31056609..31057102n/a+n/a
intronintron:Solyc02g037530.2.1.12SL2.50ch02:31058104..31058180n/a+n/a
intronintron:Solyc02g037530.2.1.13SL2.50ch02:31058372..31058615n/a+n/a
intronintron:Solyc02g037530.2.1.2SL2.50ch02:31049172..31049266n/a+n/a
intronintron:Solyc02g037530.2.1.3SL2.50ch02:31049366..31049448n/a+n/a
intronintron:Solyc02g037530.2.1.4SL2.50ch02:31049506..31049607n/a+n/a
intronintron:Solyc02g037530.2.1.5SL2.50ch02:31049764..31049845n/a+n/a
intronintron:Solyc02g037530.2.1.6SL2.50ch02:31049931..31053390n/a+n/a
intronintron:Solyc02g037530.2.1.7SL2.50ch02:31053482..31053589n/a+n/a
intronintron:Solyc02g037530.2.1.8SL2.50ch02:31053755..31053842n/a+n/a
intronintron:Solyc02g037530.2.1.9SL2.50ch02:31053966..31055011n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17716878%2Fdetails feature 17716878
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)