Solanum lycopersicum mRNA Solyc02g062560.2.1

mRNA details  
Name
Solyc02g062560.2.1
Type
mRNA
Length
2,699
Organism
Solanum lycopersicum
Description
TIM-barrel enzyme family protein (AHRD V1 *--- C5JTT1_AJEDS); contains Interpro domain(s) IPR008322 Uncharacterised conserved protein UCP033271 IPR009215 TIM-barrel signal transduction protein, predicted IPR018087 Glycoside hydrolase, family 5, conserved site
Location(s)
SL2.50ch02:34278151..34286187
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005975
Length
8037
Nb exon
9
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g062560.2.1 TIM-barrel enzyme family protein (AHRD V1 *--- C5JTT1_AJEDS); contains Interpro domain(s) IPR008322 Uncharacterised conserved protein UCP033271 IPR009215 TIM-barrel signal transduction protein, predicted IPR018087 Glycoside hydrolase, family 5, conserved site

AAAAATAAAAATGGAACCTCTCCTCTGACGGTTGTTGCCGCCTCTCTGTCCAACCGTTGCCGGTGATCTTTCATCGTCGAGATTTCAGAAGGCTAACAACTTTCTAATCTTCTCACCATTCTCACACTGAGTTACACTCTATCTTCCATTTTGAAATCTCGATTGTAACACGAATAGTAGCAGCTTGTTTGAGGAAAATGGCAACTGCACAGAGTAATTCTCCTCGAGTTTTCTGTATCGGAACAGCTGATACTAAATTCGACGAGCTTCGTTTCCTCTCCGAGCATGTGAGATCCAGTCTTAACAGCTTCTCCAATAAATCCTCATTCAAGGTAGGAGTGACAGTTGTTGATGTCTCAACCAGCCGGAAGGAGACAAATAGTTGTGCTGATTTTGATTTTGTACCGAGTAAGGATGTGCTGTCATGCTATGCACGAGGGGAAGGAACTGTGGGCAGGTTTCCAGATATTAGAGGCCAAGCTATTGCAATCATGAACAAAGCTCTGGAAACTTTCCTAAGTAAAGCTAATGGTGAACAGAATCTTGCTGGAGTGATTGGCCTTGGGGGTAGTGGAGGAACATCTCTATTGTCATCTGCCTTCCGATCTCTTCCAATTGGGATCCCAAAAGTTATAATATCTACAGTTGCCAGTGGCCAAACTGAATCTTATATTGGAACATCAGACTTGGTATTGTTTCCTTCAGTTGTAGATATTTGTGGGATTAACAATGTTAGTAAGGTTGTTCTATCTAATGCGGGTGCAGCATTTGCTGGAATGGTGATTGGAAGGCTTGAAAGTTCAAAAGAGCATAGCATCACTAATGGAAAGTTTACAGTTGGTGTAACTATGTTTGGGGTTACGACTCCTTGTGTTAATGCTGTCAAAGAAAGATTAGTGAAAGAAGGATATGAGACTTTGGTGTTCCATGCCACGGGTGTCGGGGGCAGGGCCATGGAGGATCTTGTTAGAGGAGGTTTTATACAGGGTGTGCTGGATATTACGACAACTGAGGTTGCAGATTACGTAGTTGGAGGAGTAATGGCATGTGATAGTTCCCGATTTGATGCAATATTAGAGAAGAAAATTCCTTTGGTTCTGAGTGTGGGAGCACTGGATATGGTGAATTTTGGTCCTAAAACTACCATACCTCCTGAGTTTCAGCAAAGAAAGATTCATCAACATAATGAGCAGGTTTCCCTAATGCATACTACAGTAGGTGAAAATAAGAAATTTGCTGCATTTATAGCAGAAAAGTTGAACAAGGCATCATCAAGTGTATGTGTTTGCTTGCCAGAGAAAGGCGTGTCTGCATTGGATGCACCCGGGAAAGACTTTTATGATCCTGAGGCAACTAGTTGTCTTACACATGAACTACAGATGCTTCTTGAAAATAATGAACGTTGTCAGGTTAAGGTCTACCCTTACCATATCAATGATGTGGAGTTTGCAAATGCTTTAGTTGATTCATTTTTGGAAATGTCTCCGAAATCTGGACACGTAGAATGTCAGACAGCTGAGTCCAAATCTATACAAGGCATTCAGAATGTTAATGCTGTTCTAGAGAAATATCCCTCATGCAACGGGAAAAACTTTTCTCGCCTGAATGACTTTCCAAATGCAAAACCAGAAACTTTGCAGAAAAGAATTGTGATACTGCAGAAATTGAAAGATCAAATAAGTAAGGGCAAGCCTATTATTGGGGCTGGTGCTGGTACAGGTATTTCTGCTAAGTTTGAGGAAGCTGGTGGTGTAGATTTGATTGTCTTGTACAACTCAGGGCGCTTTAGGATGGCAGGAAGGGGATCCTTAGCTGGTCTATTGCCCTTTGCTGATGCAAATGCCATTGTACTTGAGATGGCCAACGAAGTATTGCCTGTGGTTAAGGAAGTGGCAGTTCTGGCTGGAGTTTGTGCTACTGATCCTTTCCGCAGGATGGACAACTTCCTGAAGCAGTTGGAATCTGTTGGATTCTGTGGGGTGCAAAACTTTCCAACTGTTGGTCTGTTTGACGGTAACTTCAGACAAAATTTGGAAGAGACTGGAATGGGTTATGGCTTGGAGGTTGAGATGATTGCAACAGCTCATAGGATGGGCCTTTTGACAACCCCATATGCTTTCTGCCCAGATGAAGCAGTTGCTATGGCAGAAGCTGGTGCCGACATCATAGTTGCTCATATGGGGCTTACAACATCTGGTTCAATTGGTGCAAAAACAGCTGTATCATTGGAGGAAAGTGTAACTTGCGTCCAAGCTATTGCAGATGCTACTCATAGGATAAATCCTGATGCAATTGTGCTCTGCCATGGAGGCCCTATATCTTCCCCTGAAGAAGCAGCATATGTACTGAAGAGAACCACAGGAGTTCATGGATTTTATGGCGCTTCAAGCATGGAAAGACTACCAGTTGAGCAAGCTATAACTGCAACTGTCCAACAGTACAAGTCTATATCTATGGAGTGAGATGCAATGGATTTTGGTTCTTTAAATGTCCGAACCTATATGTATGGTCTTCACCTCTTTCTTTATATATTACTATCGGTCTCTTGACTTTTGAAAGAAATTTTTTGTAACCTGAGATTGATGATGCATACAATGGGTCCTTGGGGTCGGGCCCTTCTCTGGACCTTGGCATAGAGGGAGCTTTAGTGCACCGAGCTGTCCCTCTGTCTCTGAGAGTAATGATGCAGATCATAAGCA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g062560.2.1SL2.50ch02:34278387..34285990755-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g062560.2SL2.50ch02:34278151..342861878,037-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g062560.2.1.1SL2.50ch02:34285856..34286187332-n/a
exonexon:Solyc02g062560.2.1.2SL2.50ch02:34284654..34285307654-n/a
exonexon:Solyc02g062560.2.1.3SL2.50ch02:34283356..34283562207-n/a
exonexon:Solyc02g062560.2.1.4SL2.50ch02:34282763..34282978216-n/a
exonexon:Solyc02g062560.2.1.5SL2.50ch02:34282445..34282664220-2
exonexon:Solyc02g062560.2.1.6SL2.50ch02:34281579..34281826248-n/a
exonexon:Solyc02g062560.2.1.7SL2.50ch02:34280256..34280434179-1
exonexon:Solyc02g062560.2.1.8SL2.50ch02:34279907..34280160254-2
exonexon:Solyc02g062560.2.1.9SL2.50ch02:34278151..34278539389-n/a
intronintron:Solyc02g062560.2.1.2SL2.50ch02:34285308..34285855n/a-n/a
intronintron:Solyc02g062560.2.1.3SL2.50ch02:34283563..34284653n/a-n/a
intronintron:Solyc02g062560.2.1.4SL2.50ch02:34282979..34283355n/a-n/a
intronintron:Solyc02g062560.2.1.5SL2.50ch02:34282665..34282762n/a-n/a
intronintron:Solyc02g062560.2.1.6SL2.50ch02:34281827..34282444n/a-n/a
intronintron:Solyc02g062560.2.1.7SL2.50ch02:34280435..34281578n/a-n/a
intronintron:Solyc02g062560.2.1.8SL2.50ch02:34280161..34280255n/a-n/a
intronintron:Solyc02g062560.2.1.9SL2.50ch02:34278540..34279906n/a-n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17718746%2Fdetails feature 17718746
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