Solanum lycopersicum mRNA Solyc02g067180.2.1

mRNA details  
Name
Solyc02g067180.2.1
Type
mRNA
Length
2,060
Organism
Solanum lycopersicum
Description
Cystathionine gamma synthase (AHRD V1 ***- Q6R8F6_SOLLC); contains Interpro domain(s) IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
Location(s)
SL2.50ch02:37363685..37369241
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006520
  • GO:0030170
Length
5557
Nb exon
11
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g067180.2.1 Cystathionine gamma synthase (AHRD V1 ***- Q6R8F6_SOLLC); contains Interpro domain(s) IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme

CAATGTAAAGATTTAATTCGCGATAATTTTTTTTTCTTCTCAAAGTACAGTCTACTTGTGGATTACAATCACTATTTAAACTCTGTGTGGAACACAATTTCCTCAACAAACTCCCTTTTTCATTTTTTTTGGGTTTTTCACAGCCGTGGGAGTAATTACATTTTTGACCTTCCAAACTCCAAAATCATCAACAATTCAATGGCCGTCTCTAGTTACGCTAGGGCATTTCCGTCATTCGAATGTCGTTCGGAGCCTGATTTCTCCGGCAGCCTTCCACATCCTAAAGCCGGCGTTCGGTTCTCCGGCAAGTATAACTCCGGGAGTAACCGATCTCAGGTTTATGGACTGTCTTCTTTGATCTATAGGTTTCCGCCTAATTTCGTGAGGCAGCTAAGCATTAAGGCTAGGAGGAATTGCAGCAACATCGGCGTGGCTCAAGTTGTGGCGGCTTCCTGGTCTAACAACCAAGCCGGTCCTGAGTTCACTCCGGCGGCTAATGCTGTCGATTCATCCGCTTCCGCTGCTGTTACTTCGATTGGTATCACCACAGGTGACGAGGAGGTGGCGGTTGTGGAAAATGCGGATTGTAGTGATCAAAATGTACAGATTAAGGGTTCGACAGGTGTTAAATATGCTTCATTTTTGAATTCAGATGGAAGCGTTGCTATTCATGCCGGTGAAAGGTTGGGACGCGGTATTGTTACTGATGCCATAACTACCCCAGTGGTTAACACATCTGCTTACTTCTTCAACAAAACTTCTGACCTTATTGATTTTAAGGAGAAAAGACGTGCAAGTTTTGAATATGGCCGCTATGGGAACCCCACTACTGTTGTTTTGGAGGAGAAAATTAGTGCACTTGAGGGTGCTGAATCAACCTTGATAGTGGCATCTGGAATGTGTGCTAGTACTGTCATGTTCCTGGCCTTGGTTCCTGCTGGTGGGCATATTGTTACTACTACAGACTGCTACAGGAAGACACGTGTTTTTATTGAGACAATATTACCTAAAATGGGAATTACGGCCACAGTTATTGATCCAGCAGATATGGGAGCTTTGGAGTTAGCATTAAATCAGAAGAAAGTGGATCTTTTCTTTACTGAGTCTCCAACAAATCCATTCCTGAGATGTGTTGACATTGAGCTGGTTTCAAAGCTTTGCCGTGAAAAAGGAGCCTTGGTTTGCATAGATGGAACATTTGCAACTCCTCTTAACCAGAAGGCCCTTGCTCTAGGGGCTGACCTTGTTGTGCACTCTGCTACAAAATTCCTTGGTGGGCACAACGATGTTCTTGCAGGTTGTATTAGTGGTCCTGAAAAATTAGTTTCAGTAATCCGAAACTTGCATCATATCCTGGGTGGTGCTCTCAATCCTAATGCTGCATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAGGTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTAATCTCTCAATTTCTTCAAGGATGAATATTCCTCTCATGTCGTTTAAAGAATGCATTTTTTTTAAAAAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g067180.2.1SL2.50ch02:37363923..37369043541-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g067180.2SL2.50ch02:37363685..373692415,557-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g067180.2.1.1SL2.50ch02:37368566..37369241676-2
exonexon:Solyc02g067180.2.1.10SL2.50ch02:37364206..37364324119-1
exonexon:Solyc02g067180.2.1.11SL2.50ch02:37363685..37364047363-n/a
exonexon:Solyc02g067180.2.1.2SL2.50ch02:37367369..37367472104-n/a
exonexon:Solyc02g067180.2.1.3SL2.50ch02:37367048..3736712174-1
exonexon:Solyc02g067180.2.1.4SL2.50ch02:37366747..37366915169-n/a
exonexon:Solyc02g067180.2.1.5SL2.50ch02:37366460..3736651960-n/a
exonexon:Solyc02g067180.2.1.6SL2.50ch02:37366160..37366363204-n/a
exonexon:Solyc02g067180.2.1.7SL2.50ch02:37365983..3736606987-n/a
exonexon:Solyc02g067180.2.1.8SL2.50ch02:37365242..37365349108-n/a
exonexon:Solyc02g067180.2.1.9SL2.50ch02:37364414..3736450996-n/a
intronintron:Solyc02g067180.2.1.10SL2.50ch02:37364325..37364413n/a-n/a
intronintron:Solyc02g067180.2.1.11SL2.50ch02:37364048..37364205n/a-n/a
intronintron:Solyc02g067180.2.1.2SL2.50ch02:37367473..37368565n/a-n/a
intronintron:Solyc02g067180.2.1.3SL2.50ch02:37367122..37367368n/a-n/a
intronintron:Solyc02g067180.2.1.4SL2.50ch02:37366916..37367047n/a-n/a
intronintron:Solyc02g067180.2.1.5SL2.50ch02:37366520..37366746n/a-n/a
intronintron:Solyc02g067180.2.1.6SL2.50ch02:37366364..37366459n/a-n/a
intronintron:Solyc02g067180.2.1.7SL2.50ch02:37366070..37366159n/a-n/a
intronintron:Solyc02g067180.2.1.8SL2.50ch02:37365350..37365982n/a-n/a
intronintron:Solyc02g067180.2.1.9SL2.50ch02:37364510..37365241n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17721215%2Fdetails feature 17721215
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